| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is 209554258
Identifier: 209554258
GI number: 209554258
Start: 9125
End: 10675
Strand: Reverse
Name: 209554258
Synonym: UUR10_0012
Alternate gene names: NA
Gene position: 10675-9125 (Counterclockwise)
Preceding gene: 209554171
Following gene: NA
Centisome position: 1.22
GC content: 30.43
Gene sequence:
>1551_bases ATGAAAAAGTTAAACAAAAAAAAATTATTTTTATCGCTTGGTAGTGTTTTTGCTTTAAGTTCAGTTGTTGCTATAACAGC ATCATGCTCACAAAAATCAACATTAAACTACAGTCAGTTTTATTGAACTTCACCAACAAGTGATGACGATAATGGTTTCC AAACAAAATATAAAAGTATGGCCAATGATGGCAAACGCGCTTTATTAATGCCAGGGTTTCAACATCCAGAAAAATTACAA AATGCTTTAGCAAATGATAAATTTGATGCTAATTCAATTGCTCTAATTTTAGATGCAGTTTACAACAATGATAACAAAGC TGAATTCTACAAAGGCGCTGATCGTGTTGCTGATGTTTATTTTAAAGTAGATGAAGCCGCTTTTTTAGGTGGTATTGCCG CTGCCTATATGTTAAATTCAAATCAATCAGTTTTTGGCAAGGACAACAAACTAACTTGAGGTGGATATGTTGCTTTAAAT GCTAAAAACACAACTAATTATTTAGCAGGTTTTGATTTAGGTGTTAAATGAGCTAATGAAAAATTAAAAGGCAAAAGCGT TAAACAAGAGGGGACACAAGAAACAAAAACTTGAATTGAAGTTGAACAAGTTTATGCTTCTGAAAGTAGTGCAGGTGGTT TCCAACCAGAAAATGATAACGCTAAAAAAATTATTCGAGAATTAATTACTAAAGGCGTTGATTTAATTTTACCAGTAGCT ATTACTCAAGTTGGTGTTGCTGTAACTGAAGCAATCGCAACTACTTCACATAACGTAGGTGTTATTGGTGTTGACGTAGA AGTTGAAAACGATGAAGCAATTAATAAGAAAACAGATAAATTTATCAACACAAATTTAAGCGGTAATAAAAATGGTGTAG TACGTTTTTCAATTACAAAACGTTTAGATGTTGCAACAGTAAAATTATTAGAAAACGCAATAAGTGGTCAATCACTATCT AAAGGAAAAGACGAAATTATTATTGGAAGTGAAATTGATCCAAGAGATAAATACAAATTAGGTGTTAATACTGTTGGTAA CTTATCTGATGGGGTTGTTGGTATTTCGCCATCTGCTTATCATTATGTAATTGATGCTTTTAATTTAGCACAAGCAAATG AAAGTGATAAAATAAGTACATATGATCAATTAGTTAATAAAATTACTAATGATGAATTATTTAAAACACTTGATAAAAAA CCACTTGTTGAAGGTTATTTAGATGTTAAAAAAGAAACAGATAATGATGCTGCTTTATTAGAAAACAAAACAATTGATCC AAGAGTAAATGGTGGAACACTTTATAAATCAGCTAAAGGTACATACTATTTCTATCCTGTTGCTAAATCAACATACATTT CCAATTCTTCTTCAAATAAATTCAAAGAATTATGAGATGGTGCTAAAACAAACGAAGAAAAACAATCGTTAATTGGTTTA ATTCTATCTTATGCAGGCGCTAAAGTAAAAGATGGTGGATATTCTGAAGCTACTTATAATGGTTTAAAAGAATTCTACGC AAAACATGGTATTAAAATCCCAACATTATAA
Upstream 100 bases:
>100_bases TTATCCCTTTTTAGGGTAATATTATTAGCGACAAATGAATAGAAAATTGTTCATTTAGTTAATTAAGGTTAAATTTATGA ATATTAAAAAAAGGAGTAAA
Downstream 100 bases:
>100_bases TTTTATTTATTGATAATAAAATAAAACATTAAATATTGCAATTATTTGAGATTAAAACTTAAATAAAAATCAATGCTTAA TGTTTTTTTATTTCTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKKLNKKKLFLSLGSVFALSSVVAITASCSQKSTLNYSQFYWTSPTSDDDNGFQTKYKSMANDGKRALLMPGFQHPEKLQ NALANDKFDANSIALILDAVYNNDNKAEFYKGADRVADVYFKVDEAAFLGGIAAAYMLNSNQSVFGKDNKLTWGGYVALN AKNTTNYLAGFDLGVKWANEKLKGKSVKQEGTQETKTWIEVEQVYASESSAGGFQPENDNAKKIIRELITKGVDLILPVA ITQVGVAVTEAIATTSHNVGVIGVDVEVENDEAINKKTDKFINTNLSGNKNGVVRFSITKRLDVATVKLLENAISGQSLS KGKDEIIIGSEIDPRDKYKLGVNTVGNLSDGVVGISPSAYHYVIDAFNLAQANESDKISTYDQLVNKITNDELFKTLDKK PLVEGYLDVKKETDNDAALLENKTIDPRVNGGTLYKSAKGTYYFYPVAKSTYISNSSSNKFKELWDGAKTNEEKQSLIGL ILSYAGAKVKDGGYSEATYNGLKEFYAKHGIKIPTL
Sequences:
>Translated_516_residues MKKLNKKKLFLSLGSVFALSSVVAITASCSQKSTLNYSQFY*TSPTSDDDNGFQTKYKSMANDGKRALLMPGFQHPEKLQ NALANDKFDANSIALILDAVYNNDNKAEFYKGADRVADVYFKVDEAAFLGGIAAAYMLNSNQSVFGKDNKLT*GGYVALN AKNTTNYLAGFDLGVK*ANEKLKGKSVKQEGTQETKT*IEVEQVYASESSAGGFQPENDNAKKIIRELITKGVDLILPVA ITQVGVAVTEAIATTSHNVGVIGVDVEVENDEAINKKTDKFINTNLSGNKNGVVRFSITKRLDVATVKLLENAISGQSLS KGKDEIIIGSEIDPRDKYKLGVNTVGNLSDGVVGISPSAYHYVIDAFNLAQANESDKISTYDQLVNKITNDELFKTLDKK PLVEGYLDVKKETDNDAALLENKTIDPRVNGGTLYKSAKGTYYFYPVAKSTYISNSSSNKFKEL*DGAKTNEEKQSLIGL ILSYAGAKVKDGGYSEATYNGLKEFYAKHGIKIPTL >Mature_516_residues MKKLNKKKLFLSLGSVFALSSVVAITASCSQKSTLNYSQFY*TSPTSDDDNGFQTKYKSMANDGKRALLMPGFQHPEKLQ NALANDKFDANSIALILDAVYNNDNKAEFYKGADRVADVYFKVDEAAFLGGIAAAYMLNSNQSVFGKDNKLT*GGYVALN AKNTTNYLAGFDLGVK*ANEKLKGKSVKQEGTQETKT*IEVEQVYASESSAGGFQPENDNAKKIIRELITKGVDLILPVA ITQVGVAVTEAIATTSHNVGVIGVDVEVENDEAINKKTDKFINTNLSGNKNGVVRFSITKRLDVATVKLLENAISGQSLS KGKDEIIIGSEIDPRDKYKLGVNTVGNLSDGVVGISPSAYHYVIDAFNLAQANESDKISTYDQLVNKITNDELFKTLDKK PLVEGYLDVKKETDNDAALLENKTIDPRVNGGTLYKSAKGTYYFYPVAKSTYISNSSSNKFKEL*DGAKTNEEKQSLIGL ILSYAGAKVKDGGYSEATYNGLKEFYAKHGIKIPTL
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To T.pallidum tmpC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 55424; Mature: 55424
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNKKKLFLSLGSVFALSSVVAITASCSQKSTLNYSQFYTSPTSDDDNGFQTKYKSMA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH NDGKRALLMPGFQHPEKLQNALANDKFDANSIALILDAVYNNDNKAEFYKGADRVADVYF CCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCHHHHHHCHHHHEEEEE KVDEAAFLGGIAAAYMLNSNQSVFGKDNKLTGGYVALNAKNTTNYLAGFDLGVKANEKLK EECHHHHHHHHHHHEEECCCCCEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC GKSVKQEGTQETKTIEVEQVYASESSAGGFQPENDNAKKIIRELITKGVDLILPVAITQV CCCHHHCCCCCHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHH GVAVTEAIATTSHNVGVIGVDVEVENDEAINKKTDKFINTNLSGNKNGVVRFSITKRLDV HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHEECCCCCCCCCEEEEEECCCCHH ATVKLLENAISGQSLSKGKDEIIIGSEIDPRDKYKLGVNTVGNLSDGVVGISPSAYHYVI HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEE DAFNLAQANESDKISTYDQLVNKITNDELFKTLDKKPLVEGYLDVKKETDNDAALLENKT EHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECCC IDPRVNGGTLYKSAKGTYYFYPVAKSTYISNSSSNKFKELDGAKTNEEKQSLIGLILSYA CCCCCCCCEEEECCCCCEEEEECCCEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHC GAKVKDGGYSEATYNGLKEFYAKHGIKIPTL CCEECCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKLNKKKLFLSLGSVFALSSVVAITASCSQKSTLNYSQFYTSPTSDDDNGFQTKYKSMA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHH NDGKRALLMPGFQHPEKLQNALANDKFDANSIALILDAVYNNDNKAEFYKGADRVADVYF CCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHCCCCHHHHHHCHHHHEEEEE KVDEAAFLGGIAAAYMLNSNQSVFGKDNKLTGGYVALNAKNTTNYLAGFDLGVKANEKLK EECHHHHHHHHHHHEEECCCCCEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCC GKSVKQEGTQETKTIEVEQVYASESSAGGFQPENDNAKKIIRELITKGVDLILPVAITQV CCCHHHCCCCCHHEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHH GVAVTEAIATTSHNVGVIGVDVEVENDEAINKKTDKFINTNLSGNKNGVVRFSITKRLDV HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHEECCCCCCCCCEEEEEECCCCHH ATVKLLENAISGQSLSKGKDEIIIGSEIDPRDKYKLGVNTVGNLSDGVVGISPSAYHYVI HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCEEECCCCCEEEEE DAFNLAQANESDKISTYDQLVNKITNDELFKTLDKKPLVEGYLDVKKETDNDAALLENKT EHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEECCC IDPRVNGGTLYKSAKGTYYFYPVAKSTYISNSSSNKFKELDGAKTNEEKQSLIGLILSYA CCCCCCCCEEEECCCCCEEEEECCCEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHC GAKVKDGGYSEATYNGLKEFYAKHGIKIPTL CCEECCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]