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The map label for this gene is 209554051

Identifier: 209554051

GI number: 209554051

Start: 797912

End: 799702

Strand: Reverse

Name: 209554051

Synonym: UUR10_0667

Alternate gene names: NA

Gene position: 799702-797912 (Counterclockwise)

Preceding gene: 209554300

Following gene: 209554427

Centisome position: 91.45

GC content: 28.48

Gene sequence:

>1791_bases
ATGGAAAATGCCAAAAAAAGTCCTACATATGTTTATGCTTTAGGAGGACTAGAAGAAATTGGTAAAAACACTTATGTTGT
TGAACATGAAGATGAAATCATTTTAATCGATGCTGGTATTAAATTTGCTAACGCATCTTTACCAGGATTCGATGGAACTG
TTGCCAATTTTGAATACTTAATAAAGAATAATCATAAAATCCACTCATTAGTGGTTACACATGGTCATGAAGATCATATT
GGGGGAATTCCTCATATTTTACGACACGTTAACATTAAAACAATTTATGCACCAACATTAGCTGCAAAACTAATTGAACG
TCGTTTAAGTGAATATAAAGATATTAAACCACCACGAATTATTATTTTTGAAGATGAATCAATGTATAAAACTAAACACT
TTGAAGTTGATTTTTATCGTGTATGTCACTCAATTCCTGATTCATTTGGAATTTGTGTTAAAACACCTAATGGTTATATT
GTAACAACTGGAGATTTTAGATTTGATTTTGCAACAGCAGGGGATGAAACAAATCTAGCTAAAATATCACAAATTGCTAA
TCGTGGTATTTCAGTGTTAATGTGTGAATCAACAAGTGCTGAAATCCCTGGTTTTAGTGAAAGTGAACGTTATGTAATCG
ATAATATTCGTGATTACATGGTTAATATTAAAGGGCGTACTTTTATTTCAACATTTGCTTCTAATTTAGGTCGTGTTGAA
GAGATTATTGCGATTGCTGTTGGTTTAAACAAAAAAATTTGTATTATTGGGAAATCAATGGAAGCCAATATTAAAACCAG
TCGTAAACTAGGTTATTTAAATGTTCCTGAATCATCATTTATTACACATAAAGAATTACCTTTTTACAAAGATCATGAAA
TTGTGGTAATTCTAACGGGTTCACAGGGTGAAAAAATGGCTGCATTAAATGTTATGGCTAATAATAATCACTCAAAAATT
ACTTTAAAACCATCAGATACAATTATTTTGTCATCAAATCCAATTCCAGGAAACTATGCTCAAGTTGAAGCAATGGTTAA
TAAACTTTATAAACTTGGATTAACAGTTTATGAAAATTCACCAAATAAAAAAATTCATGCTTCAGGTCATGCTACACGTA
GTGAACACCAATTAATGATTAAAGCGATTAATCCTTCATATTTATTCCCTATTCATGGTGAATATAAAATGTTCCGTGCC
CTAAAACAAAATGCTGTGGATCAAGGTTTTGATAAAGACCATGTTATTATTGCAACAAATGGTCAAAAATTACAATTATT
AGATGGTGTTTTAAGTCATAGTAATATTCATGTTGATGCTGAACCTAAATTTATTAATGGTTATGAAATTAGTTCTAAAA
TTAGTAAATTATTAAGCGAACGTGTTGTTTTATCAAGTGATGGAATTTTAAATTTAGTTTTAAATGCTGATTTTAAAAAA
GCTAAATTAAATTCAGCTGTAAGTATTTCAACACGAGGTTGCTTTTTTGCTAAAGAATCAACAAATCTAATTAATAAAAT
TTCTAATGTAGCAAAATCAAGTTTAGAAGATGCATTAGCAAAAAAAGAATTTGATGAGAAAAAACTAAAAGAAATTGTTA
GTGGTAGTGTTAAATCAATTGTTTGAAAATGACGTAAGAAAAATCCTATTATTAACATTACAATTATTAATAATGATTTA
GTTGAACAATTTAGAAAAGATAACAATTATGTTGAGTTCATCAAACAAACTGAAGTTGAAGAAATTGAACAAGAAGTAGA
TATTGATGATTTAATTTCAAATGGTTTATAA

Upstream 100 bases:

>100_bases
TCAAGGTTTTATATAAAAGGTGTGTTTACATCGTTTTATATATTTATATAAATAAAATTATATTTTTAATATTAGAAAAA
CCAAATTATAAGGAGTTAAG

Downstream 100 bases:

>100_bases
GAATCATTAAAAACCTTAAGGAAATTGTTAAATATGCAATACAAAATGTTAGTTATTGATTTAGATGGTACTTTATTATC
AAAAACAAAAAATATTAGTA

Product: metallo-beta-lactamase domain protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MENAKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFEYLIKNNHKIHSLVVTHGHEDHI
GGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRIIIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYI
VTTGDFRFDFATAGDETNLAKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRVE
EIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILTGSQGEKMAALNVMANNNHSKI
TLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYENSPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRA
LKQNAVDQGFDKDHVIIATNGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFKK
AKLNSAVSISTRGCFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVKSIVWKWRKKNPIINITIINNDL
VEQFRKDNNYVEFIKQTEVEEIEQEVDIDDLISNGL

Sequences:

>Translated_596_residues
MENAKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFEYLIKNNHKIHSLVVTHGHEDHI
GGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRIIIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYI
VTTGDFRFDFATAGDETNLAKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRVE
EIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILTGSQGEKMAALNVMANNNHSKI
TLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYENSPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRA
LKQNAVDQGFDKDHVIIATNGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFKK
AKLNSAVSISTRGCFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVKSIV*K*RKKNPIINITIINNDL
VEQFRKDNNYVEFIKQTEVEEIEQEVDIDDLISNGL
>Mature_596_residues
MENAKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFEYLIKNNHKIHSLVVTHGHEDHI
GGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRIIIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYI
VTTGDFRFDFATAGDETNLAKISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRVE
EIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILTGSQGEKMAALNVMANNNHSKI
TLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYENSPNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRA
LKQNAVDQGFDKDHVIIATNGQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFKK
AKLNSAVSISTRGCFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVKSIV*K*RKKNPIINITIINNDL
VEQFRKDNNYVEFIKQTEVEEIEQEVDIDDLISNGL

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 66341; Mature: 66341

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFEYL
CCCCCCCCCEEEEECCHHHHCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCHHCEEEE
IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRI
ECCCCEEEEEEEECCCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEE
IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDETNLA
EEECCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCEEEEECCEEEEEECCCCCCHHH
KISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRVE
HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCHHHHEEECCCCHHHHHHHHHHHHHH
EIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILTG
HHHHHEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEEC
SQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYENS
CCCCEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECC
PNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIATN
CCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEC
GQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFKK
CCEEEEHHHHHCCCCEEEECCCCEECCEEHHHHHHHHHHHCEEECCCCEEEEEEECCCCH
AKLNSAVSISTRGCFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVKSI
HHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
VKRKKNPIINITIINNDLVEQFRKDNNYVEFIKQTEVEEIEQEVDIDDLISNGL
HHHCCCCEEEEEEECHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure
MENAKKSPTYVYALGGLEEIGKNTYVVEHEDEIILIDAGIKFANASLPGFDGTVANFEYL
CCCCCCCCCEEEEECCHHHHCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCHHCEEEE
IKNNHKIHSLVVTHGHEDHIGGIPHILRHVNIKTIYAPTLAAKLIERRLSEYKDIKPPRI
ECCCCEEEEEEEECCCCCCCCCHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEE
IIFEDESMYKTKHFEVDFYRVCHSIPDSFGICVKTPNGYIVTTGDFRFDFATAGDETNLA
EEECCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCEEEEECCEEEEEECCCCCCHHH
KISQIANRGISVLMCESTSAEIPGFSESERYVIDNIRDYMVNIKGRTFISTFASNLGRVE
HHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCHHHHEEECCCCHHHHHHHHHHHHHH
EIIAIAVGLNKKICIIGKSMEANIKTSRKLGYLNVPESSFITHKELPFYKDHEIVVILTG
HHHHHEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEEC
SQGEKMAALNVMANNNHSKITLKPSDTIILSSNPIPGNYAQVEAMVNKLYKLGLTVYENS
CCCCEEEEEEEEECCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECC
PNKKIHASGHATRSEHQLMIKAINPSYLFPIHGEYKMFRALKQNAVDQGFDKDHVIIATN
CCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEC
GQKLQLLDGVLSHSNIHVDAEPKFINGYEISSKISKLLSERVVLSSDGILNLVLNADFKK
CCEEEEHHHHHCCCCEEEECCCCEECCEEHHHHHHHHHHHCEEECCCCEEEEEEECCCCH
AKLNSAVSISTRGCFFAKESTNLINKISNVAKSSLEDALAKKEFDEKKLKEIVSGSVKSI
HHCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHH
VKRKKNPIINITIINNDLVEQFRKDNNYVEFIKQTEVEEIEQEVDIDDLISNGL
HHHCCCCEEEEEEECHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]