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The map label for this gene is rbsB [H]

Identifier: 209551901

GI number: 209551901

Start: 4498744

End: 4499727

Strand: Direct

Name: rbsB [H]

Synonym: Rleg2_4334

Alternate gene names: 209551901

Gene position: 4498744-4499727 (Clockwise)

Preceding gene: 209551899

Following gene: 209551902

Centisome position: 99.14

GC content: 58.74

Gene sequence:

>984_bases
ATGTCCAATTTTAAGCGTGAATCCGTCTTGATCAGTGCACCGCGCCGTGCGGCCTTGAAGCTCGGCCTTGCCGGCACTCT
GGTGCTGGCGCTGTCCTGCAGCGTATCGCCGGCCTTTGCGGCCGAGAAGCCGAAGGTCGGCCTGATCATGAAATCCTTGT
CGAATGAGTTCTTCAAGCAGATGAAGGCTGGCGCCGATAAATATGCGGCCGAGAACAAGGACAAGTTCGATTTCAAAGCC
GTCGGCATGAAAGACGAGCGTGACTTCGCCTCGCAGGTCGACGCCGTCGAGAACTTCGTCACCCAGAAATACGATATCAT
CGTCGTCGCACCGGCCGATTCAAAGGCAATGGCAACGCCGCTGGCAAAGGCGGTCAAGGCTGGCGTCAAGGTCATCAATA
TCGACGTGCCGCTCGATGCCGATGCCAAGAAGAAGGCCGGTATCGATCTGGCTTTCTTCGGTCCTGACAACAAGGAAGGC
GCAAAGCTTGCCGGCGATGCGCTTGCCAAGGATCTGGGTCCCGGCGCCAAGGTGGTCATCCTCGAGGGCAACCCCGAGGC
CGACAATGCCAAGGAGCGCAAGGAAGGCTTCGTGGACTCCGTCAAATCGGGCAAGCTCGAGCTTCTCGACAGCAAGACCG
CCCATTGGGAGACCGAAGAAGCCAACACCGTCATGACGAATTTCCTGACGAAGTATAAGGATATTCAAGGCGTGATGGCG
GCCAACGACTCCATGGCGCTCGGCGTCGTCAAGGCCCTCGATGCGGCCGGCCAGGCCGGCAAGATCAAGGTCGTCGGCTT
CGACAACATCCCGCCGGTTCAGCCGCTGATCAAGGATGGCAAGATGCTCGCCACCGTCGAGCAGTACGGCGCGCAGATGG
CCGTCATGGGCATCGACTATGGCATGCGGGAACTTGCCGGCGAAAAATTCACCGGCTGGGTCAAGACCGACGTCAAGCTC
GTCACCTCTGCCGATCTGAAATAA

Upstream 100 bases:

>100_bases
ACAATTTTCGGAGGCGTGTTACCCATTTGGCGTTGGAAACGGTTCATTTGCCGAGGGCAACTCAGATGGAGCTGAGCCCA
GGGCCGTTCGGGAGGAAAAA

Downstream 100 bases:

>100_bases
TCGGGATTTCCGACGACAGGACAAAGAGGCGCCGGCTTGCTGCCGGCGCCAACGACTACCAACCGATCGACGCGTTGATT
GCTCCGGAGGAGGCTTGTTT

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSNFKRESVLISAPRRAALKLGLAGTLVLALSCSVSPAFAAEKPKVGLIMKSLSNEFFKQMKAGADKYAAENKDKFDFKA
VGMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMATPLAKAVKAGVKVINIDVPLDADAKKKAGIDLAFFGPDNKEG
AKLAGDALAKDLGPGAKVVILEGNPEADNAKERKEGFVDSVKSGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVMA
ANDSMALGVVKALDAAGQAGKIKVVGFDNIPPVQPLIKDGKMLATVEQYGAQMAVMGIDYGMRELAGEKFTGWVKTDVKL
VTSADLK

Sequences:

>Translated_327_residues
MSNFKRESVLISAPRRAALKLGLAGTLVLALSCSVSPAFAAEKPKVGLIMKSLSNEFFKQMKAGADKYAAENKDKFDFKA
VGMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMATPLAKAVKAGVKVINIDVPLDADAKKKAGIDLAFFGPDNKEG
AKLAGDALAKDLGPGAKVVILEGNPEADNAKERKEGFVDSVKSGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVMA
ANDSMALGVVKALDAAGQAGKIKVVGFDNIPPVQPLIKDGKMLATVEQYGAQMAVMGIDYGMRELAGEKFTGWVKTDVKL
VTSADLK
>Mature_326_residues
SNFKRESVLISAPRRAALKLGLAGTLVLALSCSVSPAFAAEKPKVGLIMKSLSNEFFKQMKAGADKYAAENKDKFDFKAV
GMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMATPLAKAVKAGVKVINIDVPLDADAKKKAGIDLAFFGPDNKEGA
KLAGDALAKDLGPGAKVVILEGNPEADNAKERKEGFVDSVKSGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVMAA
NDSMALGVVKALDAAGQAGKIKVVGFDNIPPVQPLIKDGKMLATVEQYGAQMAVMGIDYGMRELAGEKFTGWVKTDVKLV
TSADLK

Specific function: Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790192, Length=298, Percent_Identity=36.241610738255, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1790526, Length=280, Percent_Identity=36.0714285714286, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1790674, Length=204, Percent_Identity=30.3921568627451, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789990, Length=185, Percent_Identity=30.2702702702703, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788473, Length=218, Percent_Identity=29.3577981651376, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34866; Mature: 34734

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFKRESVLISAPRRAALKLGLAGTLVLALSCSVSPAFAAEKPKVGLIMKSLSNEFFKQ
CCCCCCCEEEEECCCHHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
MKAGADKYAAENKDKFDFKAVGMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMATP
HHCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
LAKAVKAGVKVINIDVPLDADAKKKAGIDLAFFGPDNKEGAKLAGDALAKDLGPGAKVVI
HHHHHHCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEE
LEGNPEADNAKERKEGFVDSVKSGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVMA
ECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
ANDSMALGVVKALDAAGQAGKIKVVGFDNIPPVQPLIKDGKMLATVEQYGAQMAVMGIDY
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEHHHHCCEEEEEECCC
GMRELAGEKFTGWVKTDVKLVTSADLK
CHHHHCCCCCCCEEECCEEEEEECCCC
>Mature Secondary Structure 
SNFKRESVLISAPRRAALKLGLAGTLVLALSCSVSPAFAAEKPKVGLIMKSLSNEFFKQ
CCCCCCEEEEECCCHHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
MKAGADKYAAENKDKFDFKAVGMKDERDFASQVDAVENFVTQKYDIIVVAPADSKAMATP
HHCCCHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
LAKAVKAGVKVINIDVPLDADAKKKAGIDLAFFGPDNKEGAKLAGDALAKDLGPGAKVVI
HHHHHHCCCEEEEEECCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEE
LEGNPEADNAKERKEGFVDSVKSGKLELLDSKTAHWETEEANTVMTNFLTKYKDIQGVMA
ECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
ANDSMALGVVKALDAAGQAGKIKVVGFDNIPPVQPLIKDGKMLATVEQYGAQMAVMGIDY
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHCCCEEEEHHHHCCEEEEEECCC
GMRELAGEKFTGWVKTDVKLVTSADLK
CHHHHCCCCCCCEEECCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6313683; 7686882; 9278503; 3011793; 3011794; 8899705; 9298646; 1583688; 7982928; 9641984 [H]