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The map label for this gene is ybjT [H]

Identifier: 209551890

GI number: 209551890

Start: 4489607

End: 4490587

Strand: Reverse

Name: ybjT [H]

Synonym: Rleg2_4323

Alternate gene names: 209551890

Gene position: 4490587-4489607 (Counterclockwise)

Preceding gene: 209551891

Following gene: 209551889

Centisome position: 98.96

GC content: 65.44

Gene sequence:

>981_bases
ATGACCCTTGCCAACCTGCCGCCGCTCGTCACCGTATTCGGAGGATCCGGCTTCGTGGGCAGGCACGTGGTTCGGGCGCT
CGCCAAGCGCGGCTATCGCATCCGTGTGGCTGTGCGCCGTCCCGATCTCGCCGGCTTCCTGCAGCCGCTCGGCAATGTCG
GCCAGATCTCCTTCGTCCAGGCGAACCTGCGCTATCGCAGCTCGATCGACCGTGCGGTCGACGGCGCGGACCATGTCGTC
AACTGCGTCGGCATTCTGCACGAGACCGGCCGCAACACTTTCGACGCGGTGCAGGAATTCGGCGCACGCGCGGTCGCTGA
AGCGGCGCGCGGCGCCGGCGCCACGCTCGCCCATATTTCGGCGATCGGCGCCAATGCCAATTCCGAGTCCGGCTATGGCC
GTACCAAGGGCCGCGCCGAAACCGCCATCCTCTCGGTCAAGCCCGATGCGGTGATCTTCCGCCCGTCGATCGTCTTCGGC
CCGGAGGACAGCTTCTTCAACAAGTTTGCCGACATGGCCCGCATGTCGCCGGTTCTGCCGCTCATCGGCGGCGGCAAGAC
GAAATTCCAGCCCGTCTATGTCGAGGATGTCGCCGAGGCCGTCGCCCGTGCCGTCGATGGTAAGGTCGCCGGCGGCAAGG
TCTATGAGCTTGGCGGGCCCGAGGTGCTGAGCTTCCGCGAATGTCTCGAGATGATGCTGAAGGTGACGAGCCGCAAGAAC
CCGCTGGTTTCCCTGCCCTTCGGCATTGCGTCGATGATCGGCAGCATCGCCTCGCTCATCCCCTTCATAACGCCGCCGAT
CACGCCGGACCAGGTGCGCATGCTGAAGCATGACAATATCGTTTCCCGGGAAGCCGAAGCGGAAGGCCGCACGCTGAAGG
GTCTCGGCATTGCGCCCACCATGGCCGCATCCGTGCTCGGCTCCTACCTCGTGCATTATCGTCCGCACGGCCAGTATACG
GGCACCGGCAAGGCCGCCTGA

Upstream 100 bases:

>100_bases
ATCCGCAAAACTCGCGGCGCGATAGGCCTTCCCGTCGCGCCGGGATTCGGCTAAGACGGAGCCGATACAGCATCCCGCCA
AGCCTTTCGAGGAGCCTGCC

Downstream 100 bases:

>100_bases
ACAGTTTCGATCGTCTGAAGGACGCCGTTCGCGCACGCCGCGGACGGCGTTTTGCTTTGCCGGCTTAAGCAAAGCTGGCG
CAAGTTTGAAATGTTGTTGT

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTLANLPPLVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFVQANLRYRSSIDRAVDGADHVV
NCVGILHETGRNTFDAVQEFGARAVAEAARGAGATLAHISAIGANANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFG
PEDSFFNKFADMARMSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKN
PLVSLPFGIASMIGSIASLIPFITPPITPDQVRMLKHDNIVSREAEAEGRTLKGLGIAPTMAASVLGSYLVHYRPHGQYT
GTGKAA

Sequences:

>Translated_326_residues
MTLANLPPLVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFVQANLRYRSSIDRAVDGADHVV
NCVGILHETGRNTFDAVQEFGARAVAEAARGAGATLAHISAIGANANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFG
PEDSFFNKFADMARMSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKN
PLVSLPFGIASMIGSIASLIPFITPPITPDQVRMLKHDNIVSREAEAEGRTLKGLGIAPTMAASVLGSYLVHYRPHGQYT
GTGKAA
>Mature_325_residues
TLANLPPLVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFVQANLRYRSSIDRAVDGADHVVN
CVGILHETGRNTFDAVQEFGARAVAEAARGAGATLAHISAIGANANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFGP
EDSFFNKFADMARMSPVLPLIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKNP
LVSLPFGIASMIGSIASLIPFITPPITPDQVRMLKHDNIVSREAEAEGRTLKGLGIAPTMAASVLGSYLVHYRPHGQYTG
TGKAA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=269, Percent_Identity=34.2007434944238, Blast_Score=137, Evalue=2e-32,
Organism=Escherichia coli, GI87081793, Length=274, Percent_Identity=24.4525547445255, Blast_Score=83, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17556106, Length=238, Percent_Identity=32.3529411764706, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24667554, Length=241, Percent_Identity=33.195020746888, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 34584; Mature: 34453

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLANLPPLVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFVQ
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCCEEEEE
ANLRYRSSIDRAVDGADHVVNCVGILHETGRNTFDAVQEFGARAVAEAARGAGATLAHIS
ECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AIGANANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLP
HHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECEEEECCCHHHHHHHHHHHHHCCCCE
LIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKN
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCC
PLVSLPFGIASMIGSIASLIPFITPPITPDQVRMLKHDNIVSREAEAEGRTLKGLGIAPT
CEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHCCCCEEECCCCCHH
MAASVLGSYLVHYRPHGQYTGTGKAA
HHHHHHHHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure 
TLANLPPLVTVFGGSGFVGRHVVRALAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFVQ
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCCEEEEE
ANLRYRSSIDRAVDGADHVVNCVGILHETGRNTFDAVQEFGARAVAEAARGAGATLAHIS
ECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AIGANANSESGYGRTKGRAETAILSVKPDAVIFRPSIVFGPEDSFFNKFADMARMSPVLP
HHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECEEEECCCHHHHHHHHHHHHHCCCCE
LIGGGKTKFQPVYVEDVAEAVARAVDGKVAGGKVYELGGPEVLSFRECLEMMLKVTSRKN
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCC
PLVSLPFGIASMIGSIASLIPFITPPITPDQVRMLKHDNIVSREAEAEGRTLKGLGIAPT
CEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHCCHHCCCCEEECCCCCHH
MAASVLGSYLVHYRPHGQYTGTGKAA
HHHHHHHHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]