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The map label for this gene is rlpA [C]

Identifier: 209551884

GI number: 209551884

Start: 4484419

End: 4484781

Strand: Reverse

Name: rlpA [C]

Synonym: Rleg2_4317

Alternate gene names: 209551884

Gene position: 4484781-4484419 (Counterclockwise)

Preceding gene: 209551885

Following gene: 209551883

Centisome position: 98.83

GC content: 57.58

Gene sequence:

>363_bases
TTGAAGAAAATAAGCCGTTCTATTATCGCTGCCGCAACTATTGCAGCCTGCTCTTGCCTGCTTCCGGCGGAGAGTTTTGC
TGGAAATGGCTGTGGCGGTGCTTCATGGTACGCACTCCACTCCAAAACTGCTTCCGGGGAACGTATGAATCCCGCCGTTT
TGACTGCCGCTCATCGTTCGCTTGCCTTCGGCACCAAGGTCAAGGTTACCAATCGCAACAATGGCCGCACCGTCGTCGTT
CGCATCAACGATCGCGGTCCGTTCATCCGCGGCCGGGTACTCGACCTGTCGCGCGCAGCGGCACAGAACATCGGCATGGT
CAGCTCCGGCACGGCGAAGGTCTGCTACCAGGTGATCAGCTAA

Upstream 100 bases:

>100_bases
ATTCCGTGATCGAACGCGGCACTTTTTCGCCATTTTTCGACGGATTTAAGCCCCGCCGCCTGCAAGGGCGTTGAGTTCAA
TAGTTGAGGGATACTCTGTT

Downstream 100 bases:

>100_bases
AGCTTACAGCCGCGGTGATCAGCTGAAGCTGACAGCCGAGGTGGTCAGCTGAGGCCAGGTCCGCCTCGCAGCAATTGGCT
GCGCCGTCACCGGCGCTTGC

Product: lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKKISRSIIAAATIAACSCLLPAESFAGNGCGGASWYALHSKTASGERMNPAVLTAAHRSLAFGTKVKVTNRNNGRTVVV
RINDRGPFIRGRVLDLSRAAAQNIGMVSSGTAKVCYQVIS

Sequences:

>Translated_120_residues
MKKISRSIIAAATIAACSCLLPAESFAGNGCGGASWYALHSKTASGERMNPAVLTAAHRSLAFGTKVKVTNRNNGRTVVV
RINDRGPFIRGRVLDLSRAAAQNIGMVSSGTAKVCYQVIS
>Mature_120_residues
MKKISRSIIAAATIAACSCLLPAESFAGNGCGGASWYALHSKTASGERMNPAVLTAAHRSLAFGTKVKVTNRNNGRTVVV
RINDRGPFIRGRVLDLSRAAAQNIGMVSSGTAKVCYQVIS

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=62, Percent_Identity=54.8387096774194, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 12567; Mature: 12567

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISRSIIAAATIAACSCLLPAESFAGNGCGGASWYALHSKTASGERMNPAVLTAAHRS
CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHEEHHHHC
LAFGTKVKVTNRNNGRTVVVRINDRGPFIRGRVLDLSRAAAQNIGMVSSGTAKVCYQVIS
EECCCEEEEEECCCCCEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKKISRSIIAAATIAACSCLLPAESFAGNGCGGASWYALHSKTASGERMNPAVLTAAHRS
CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCHHEEHHHHC
LAFGTKVKVTNRNNGRTVVVRINDRGPFIRGRVLDLSRAAAQNIGMVSSGTAKVCYQVIS
EECCCEEEEEECCCCCEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]