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The map label for this gene is 209551861

Identifier: 209551861

GI number: 209551861

Start: 4463063

End: 4463656

Strand: Reverse

Name: 209551861

Synonym: Rleg2_4293

Alternate gene names: NA

Gene position: 4463656-4463063 (Counterclockwise)

Preceding gene: 209551862

Following gene: 209551860

Centisome position: 98.36

GC content: 58.25

Gene sequence:

>594_bases
ATGAACCAGACATCTTTTGCCTTCGCGCATGATCGCAGCGGTCGCGGACGGCGGAGCAGGATGGACAATACCGGCAACCG
GCTTTTCTTTGGTCTCTGTCCTCCACCAGCCATCGAGCGACAAGTGGCTTCGATCGCCGACGATTATAAGAATGCTTTCT
CTCTTTCCGGTCAGTTGCGGCTGACGACACTGCATGTGACAATTCGCTGGGTCTGCGACTATCCTAACTTGCCAGAACAC
GTGATCTTCGCGGCACTGCAAGCCGGCGTTGGAGCCGAGAGCCCGCCGATCACCATCACCTTCGACCGGATCATGAGATT
TCCGCAGGCGCTGGTACTCGCTGGTGAAGGCGGGCGGAAATCCCTTGCCAGGCTGCATCTCCAACTCGGCGTCGCCATGC
ACAATGCCGGACTGCCGCGCAATATCGGCCACACATTCACGCCGCATATGACTCTGCTCTATGACCGCAAGGCCGTGCCG
GTAATGATGCTCGACAGACCGGTCTCGTGGACAGCGTACGAACTCCTGCTCATCCACAGCGTTCTTGGCAAAACCGAACA
CCACATCGTCGATCGCTGGCCGCTGCTCGGATGA

Upstream 100 bases:

>100_bases
TCTTGCGCGTCATGTTCTTTTTTTGTTCCAAGCGTGCTACCCTTGCGCGATATCGTGGCGCCATGAGATGGGAGAGCGGG
CCATGACGGCTTGGAAGCCG

Downstream 100 bases:

>100_bases
GGCACCGTGCACGGTGAGACTTGCGCTTGCCGGATATCCGCGGATAAAGCTGGAAGAGCCGTTCGGATGGCAGTGCGGAG
CGAAGACAGCATGGACGTTT

Product: 2',5' RNA ligase

Products: NA

Alternate protein names: 2 5' RNA Ligase; Phosphoesterase HXTX; Ligase; Ligase Protein; 2h Phosphoesterase

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNQTSFAFAHDRSGRGRRSRMDNTGNRLFFGLCPPPAIERQVASIADDYKNAFSLSGQLRLTTLHVTIRWVCDYPNLPEH
VIFAALQAGVGAESPPITITFDRIMRFPQALVLAGEGGRKSLARLHLQLGVAMHNAGLPRNIGHTFTPHMTLLYDRKAVP
VMMLDRPVSWTAYELLLIHSVLGKTEHHIVDRWPLLG

Sequences:

>Translated_197_residues
MNQTSFAFAHDRSGRGRRSRMDNTGNRLFFGLCPPPAIERQVASIADDYKNAFSLSGQLRLTTLHVTIRWVCDYPNLPEH
VIFAALQAGVGAESPPITITFDRIMRFPQALVLAGEGGRKSLARLHLQLGVAMHNAGLPRNIGHTFTPHMTLLYDRKAVP
VMMLDRPVSWTAYELLLIHSVLGKTEHHIVDRWPLLG
>Mature_197_residues
MNQTSFAFAHDRSGRGRRSRMDNTGNRLFFGLCPPPAIERQVASIADDYKNAFSLSGQLRLTTLHVTIRWVCDYPNLPEH
VIFAALQAGVGAESPPITITFDRIMRFPQALVLAGEGGRKSLARLHLQLGVAMHNAGLPRNIGHTFTPHMTLLYDRKAVP
VMMLDRPVSWTAYELLLIHSVLGKTEHHIVDRWPLLG

Specific function: Unknown

COG id: COG1514

COG function: function code J; 2'-5' RNA ligase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22044; Mature: 22044

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTSFAFAHDRSGRGRRSRMDNTGNRLFFGLCPPPAIERQVASIADDYKNAFSLSGQLR
CCCCCEEEEECCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE
LTTLHVTIRWVCDYPNLPEHVIFAALQAGVGAESPPITITFDRIMRFPQALVLAGEGGRK
EEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCEEEEECCCCHH
SLARLHLQLGVAMHNAGLPRNIGHTFTPHMTLLYDRKAVPVMMLDRPVSWTAYELLLIHS
HHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHH
VLGKTEHHIVDRWPLLG
HHCCHHHHHHCCCCCCC
>Mature Secondary Structure
MNQTSFAFAHDRSGRGRRSRMDNTGNRLFFGLCPPPAIERQVASIADDYKNAFSLSGQLR
CCCCCEEEEECCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEE
LTTLHVTIRWVCDYPNLPEHVIFAALQAGVGAESPPITITFDRIMRFPQALVLAGEGGRK
EEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCCEEEEECCCCHH
SLARLHLQLGVAMHNAGLPRNIGHTFTPHMTLLYDRKAVPVMMLDRPVSWTAYELLLIHS
HHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHH
VLGKTEHHIVDRWPLLG
HHCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA