| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is tenA [H]
Identifier: 209551824
GI number: 209551824
Start: 4429791
End: 4430489
Strand: Reverse
Name: tenA [H]
Synonym: Rleg2_4256
Alternate gene names: 209551824
Gene position: 4430489-4429791 (Counterclockwise)
Preceding gene: 209551827
Following gene: 209551823
Centisome position: 97.63
GC content: 62.66
Gene sequence:
>699_bases ATGGACGCCGGCACGCAAAGCACGGAACTGACGGGAAGCTTCACGGCCGCCGCCTGGGACAGGATTGCGCCCGTCATGGC CGAGATCGAGGTGCTGCCACTTCTCACGCGTCTTTCCGACGGCACGCTGCCGCCTCAGGTCTTCCGCCACTACATCCTCC AGGATGCGCTTTACCTCAAGCATTATGCCCGCTGCCTGGCGATCGTCGCAGCCAAGGCTCCTGACAATGCGCAGGTGCTG CGTTTCCTCGGTTCGGCGCAGAAGGCGATCACCGTCGAGCAGGGCCTGCATGCCGGCTTCCTCACCCAGTTCGGCATCAG CTCCGAGGATGTCACCGCAGCCGAACCCTCGCCCTCCTGTTTCGCCTATACGAATTTCCTGCTCGCCACCGCCTATCACA GCTCCTATGCAGTCGCACTTTCTTCAATCCTTCCCTGCTTCTGGATCTACTGGCATGTCGGCGAGGCGATCAAGAGCCGG CCGGCGATCGAGGGCAACGCCTTCCAGGCCTGGATCAACACCTATGGCGATCCGCAATTTGCCGCCGGCGCCCGCGAAGT GATCGCCCTGACCGATATCGCCGCCCGCGCCGCATCGCCTTCGGAGCGTGCTCAGATGATGGATGTTTTCGTGCGCGCCT CGCAATATGAATGGATGTTCTGGGATTCGGCCTGGCGGCTGGAGACCTGGCCGGTCTGA
Upstream 100 bases:
>100_bases TCTGATGATGGAATCAAGCCTCGGCAAGGCGGGCAAACCAACCTTGCTTTCGCCACAGCCTCGCCGATATATGACAGCGC AATTGAGATCGGAGAGAGTG
Downstream 100 bases:
>100_bases GACGCGTCCGACCGGCTGACAAAATAGCGTAAACAGCGGGATAATTACCGCTTTGCGGCAGGGGGCGGCGCTGCTATATG GCGCGCATGAGCACCAATTC
Product: TenA family transcriptional regulator
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MDAGTQSTELTGSFTAAAWDRIAPVMAEIEVLPLLTRLSDGTLPPQVFRHYILQDALYLKHYARCLAIVAAKAPDNAQVL RFLGSAQKAITVEQGLHAGFLTQFGISSEDVTAAEPSPSCFAYTNFLLATAYHSSYAVALSSILPCFWIYWHVGEAIKSR PAIEGNAFQAWINTYGDPQFAAGAREVIALTDIAARAASPSERAQMMDVFVRASQYEWMFWDSAWRLETWPV
Sequences:
>Translated_232_residues MDAGTQSTELTGSFTAAAWDRIAPVMAEIEVLPLLTRLSDGTLPPQVFRHYILQDALYLKHYARCLAIVAAKAPDNAQVL RFLGSAQKAITVEQGLHAGFLTQFGISSEDVTAAEPSPSCFAYTNFLLATAYHSSYAVALSSILPCFWIYWHVGEAIKSR PAIEGNAFQAWINTYGDPQFAAGAREVIALTDIAARAASPSERAQMMDVFVRASQYEWMFWDSAWRLETWPV >Mature_232_residues MDAGTQSTELTGSFTAAAWDRIAPVMAEIEVLPLLTRLSDGTLPPQVFRHYILQDALYLKHYARCLAIVAAKAPDNAQVL RFLGSAQKAITVEQGLHAGFLTQFGISSEDVTAAEPSPSCFAYTNFLLATAYHSSYAVALSSILPCFWIYWHVGEAIKSR PAIEGNAFQAWINTYGDPQFAAGAREVIALTDIAARAASPSERAQMMDVFVRASQYEWMFWDSAWRLETWPV
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324517, Length=201, Percent_Identity=24.3781094527363, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324997, Length=201, Percent_Identity=23.3830845771144, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6325378, Length=196, Percent_Identity=22.9591836734694, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 25603; Mature: 25603
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAGTQSTELTGSFTAAAWDRIAPVMAEIEVLPLLTRLSDGTLPPQVFRHYILQDALYLK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HYARCLAIVAAKAPDNAQVLRFLGSAQKAITVEQGLHAGFLTQFGISSEDVTAAEPSPSC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHCCCHHHHHHCCCCCCCCCCCCCCCCH FAYTNFLLATAYHSSYAVALSSILPCFWIYWHVGEAIKSRPAIEGNAFQAWINTYGDPQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCH AAGAREVIALTDIAARAASPSERAQMMDVFVRASQYEWMFWDSAWRLETWPV HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCC >Mature Secondary Structure MDAGTQSTELTGSFTAAAWDRIAPVMAEIEVLPLLTRLSDGTLPPQVFRHYILQDALYLK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH HYARCLAIVAAKAPDNAQVLRFLGSAQKAITVEQGLHAGFLTQFGISSEDVTAAEPSPSC HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEHHHCCCHHHHHHCCCCCCCCCCCCCCCCH FAYTNFLLATAYHSSYAVALSSILPCFWIYWHVGEAIKSRPAIEGNAFQAWINTYGDPQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCH AAGAREVIALTDIAARAASPSERAQMMDVFVRASQYEWMFWDSAWRLETWPV HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]