Click here to switch to the map view.

The map label for this gene is 209551815

Identifier: 209551815

GI number: 209551815

Start: 4422564

End: 4424267

Strand: Reverse

Name: 209551815

Synonym: Rleg2_4247

Alternate gene names: NA

Gene position: 4424267-4422564 (Counterclockwise)

Preceding gene: 209551817

Following gene: 209551812

Centisome position: 97.49

GC content: 58.98

Gene sequence:

>1704_bases
ATGGTAATGCGGATCTCCCGACCCATGAAGCGCGCTGGCACGAAGAACGAGCAATTTAAGAAGCGCGTGCCCACTGCTCT
CCTGCCGGTTTTACGCGGCAAGAAGTTCGCAGTTGACCTCCCTCAGACAGTCGCTCCTGACAGCCCGACATATACAGTCA
CGGTCACGCTTTCCGACATGATCACCTTTTCGCTGGGCGCTCCAGCCTCGCGTCTGGCTGCGATCCGTTACGCCGCAGCC
TTAGGCCATGTTGAAGCCTTCCTAGAGGCGGCGCAGCGCGGGCCTGAAGACCTTTCGCACTTGCAGATCACCGCACTGTT
AGGAGACGTCCACAAGGCACTCCTTGCCCAGTATGAGGCCAATCCCCCAGCGCGGCACAAGGTCGTCGTTGATGGTGGCG
TCGAAGAGTGGAGCGAGCTTTCAGAGTGGCAGGACATGATCGCTGACGCCGAGGTGGCCGTCCTAACGATGACACCGCAG
GGCAGAGCCGCCGCTATCTCACGGGTTAGGCGCATCATCGACATGGACGCCTTTCTGTCCGCACGCGCATTGCTGCTGTC
GGATAAGTCCTATCGCGATCTGGTCGAAGGACTTCCGGCAATCTTAAGGCGGGTCGTGGAAACCCTCTCAAATCGCAGCC
AGGGCAACTACTCGGCCGACCCTTACGCACCGCAATACCCCCAGTGGAAAGCCAAGACCGCTGCTAAACAGCGTGCGACT
GATGGCGATGTGAAGACCTTTGACGATCTCTTCGACCGCTGGAAGGCGGCAGATAAGCGCGCGGCTTCTACGCTCTCGAC
ATGGCGCGGCTACTTGGCGCGGTTTAAGCAGTTCGTGGGCCATGATGATCCGCACCGGGTCGAGCGTGTCGACGCCCTGC
GATGGAAAGACGCGCTGGTAGCCGAAGGTCTCAAGAAGATCTCAACAACCTACCTCGCAGCGCTCAACACGCTTTACCGC
TTCGGCCTCAATAACAGCGAGACGACTGGCATCACCCGCAATCCCTTCGATGGCGTGAAGGCACCGCAGAAGGCTACTGC
AGGGACAAAGCGTTTGCCTTTCACCCGCGTTGAGGTCGCGGTGATACTTAATGCTGGGCGCAAGGAAAAGCTTGCGCACC
TCCGTTGGATACCGTGGCTCCAAGCCCAGACAGGATCGCGTGTCGCAGAGATAGCACAGCTGTGGGCAACCATGGTTATC
ACCGATGATGCCGGTCACCCGTGCCTGCACATTACAACGGCACCGGATGGCGGGTCTCTCAAGAACGAAGGATCTGAGAG
GGTCGTACCGATCCACCCTGATCTCATTGAGGATGGCTTCCTTGAGTTCGTCAAGACACGCGGCAAGGGGCCGTTGTTCT
ACGGCGGCAGCAAGGGTAAGGCCGCAGTTCGGTTGCGAGATGACCAGAAGCACCCGTCGAAGGGTGTCAGCAATCGGGTT
GGAACTTGGGTGCGGGGACTGGGCATTACGGACCCGCGCAAGGGGCCAACGCATTCATTCCGGCATTGGTTTAAGTCAGA
GCTTCCGCGCCGGTCGGGGTGCAACATCCGCTTGGTTGATGCGATCCAAGGCCACTCTGCTGAAAGTGATGCGGCTGGAT
ATCATCATTCGGAAACATCGGAGATGCTTGAGGCTATCTCAAAGCTCGACCTCAAAGGGCTGGCCGACAGCGTGCCTATG
GCCGAGCAACCGGCAGACGCATAG

Upstream 100 bases:

>100_bases
TCTTCTGGGCACCATTCCAATTTGTCCCCCTTGAAATCGTTATTCATTTAGCATTTCAAGGGGTTGACGGCTCCTCAGTG
TCACACAGGAGCGCCCCACA

Downstream 100 bases:

>100_bases
CGCGTCGGGAGCACCACAGATCGCAGCGCGCCATATAGTCGGGCGCGCAGCAGGTTCAGATCAGCGTGGGCGGAGGCCGT
TGACCTTGGCGTTCCGCCGC

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase; Integrase Domain-Containing Protein; Phage Integrase Family Recombinase Protein; Phage-Related Integrase; Integrase/Resolvase Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Domain Protein SAM Domain Protein

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MVMRISRPMKRAGTKNEQFKKRVPTALLPVLRGKKFAVDLPQTVAPDSPTYTVTVTLSDMITFSLGAPASRLAAIRYAAA
LGHVEAFLEAAQRGPEDLSHLQITALLGDVHKALLAQYEANPPARHKVVVDGGVEEWSELSEWQDMIADAEVAVLTMTPQ
GRAAAISRVRRIIDMDAFLSARALLLSDKSYRDLVEGLPAILRRVVETLSNRSQGNYSADPYAPQYPQWKAKTAAKQRAT
DGDVKTFDDLFDRWKAADKRAASTLSTWRGYLARFKQFVGHDDPHRVERVDALRWKDALVAEGLKKISTTYLAALNTLYR
FGLNNSETTGITRNPFDGVKAPQKATAGTKRLPFTRVEVAVILNAGRKEKLAHLRWIPWLQAQTGSRVAEIAQLWATMVI
TDDAGHPCLHITTAPDGGSLKNEGSERVVPIHPDLIEDGFLEFVKTRGKGPLFYGGSKGKAAVRLRDDQKHPSKGVSNRV
GTWVRGLGITDPRKGPTHSFRHWFKSELPRRSGCNIRLVDAIQGHSAESDAAGYHHSETSEMLEAISKLDLKGLADSVPM
AEQPADA

Sequences:

>Translated_567_residues
MVMRISRPMKRAGTKNEQFKKRVPTALLPVLRGKKFAVDLPQTVAPDSPTYTVTVTLSDMITFSLGAPASRLAAIRYAAA
LGHVEAFLEAAQRGPEDLSHLQITALLGDVHKALLAQYEANPPARHKVVVDGGVEEWSELSEWQDMIADAEVAVLTMTPQ
GRAAAISRVRRIIDMDAFLSARALLLSDKSYRDLVEGLPAILRRVVETLSNRSQGNYSADPYAPQYPQWKAKTAAKQRAT
DGDVKTFDDLFDRWKAADKRAASTLSTWRGYLARFKQFVGHDDPHRVERVDALRWKDALVAEGLKKISTTYLAALNTLYR
FGLNNSETTGITRNPFDGVKAPQKATAGTKRLPFTRVEVAVILNAGRKEKLAHLRWIPWLQAQTGSRVAEIAQLWATMVI
TDDAGHPCLHITTAPDGGSLKNEGSERVVPIHPDLIEDGFLEFVKTRGKGPLFYGGSKGKAAVRLRDDQKHPSKGVSNRV
GTWVRGLGITDPRKGPTHSFRHWFKSELPRRSGCNIRLVDAIQGHSAESDAAGYHHSETSEMLEAISKLDLKGLADSVPM
AEQPADA
>Mature_567_residues
MVMRISRPMKRAGTKNEQFKKRVPTALLPVLRGKKFAVDLPQTVAPDSPTYTVTVTLSDMITFSLGAPASRLAAIRYAAA
LGHVEAFLEAAQRGPEDLSHLQITALLGDVHKALLAQYEANPPARHKVVVDGGVEEWSELSEWQDMIADAEVAVLTMTPQ
GRAAAISRVRRIIDMDAFLSARALLLSDKSYRDLVEGLPAILRRVVETLSNRSQGNYSADPYAPQYPQWKAKTAAKQRAT
DGDVKTFDDLFDRWKAADKRAASTLSTWRGYLARFKQFVGHDDPHRVERVDALRWKDALVAEGLKKISTTYLAALNTLYR
FGLNNSETTGITRNPFDGVKAPQKATAGTKRLPFTRVEVAVILNAGRKEKLAHLRWIPWLQAQTGSRVAEIAQLWATMVI
TDDAGHPCLHITTAPDGGSLKNEGSERVVPIHPDLIEDGFLEFVKTRGKGPLFYGGSKGKAAVRLRDDQKHPSKGVSNRV
GTWVRGLGITDPRKGPTHSFRHWFKSELPRRSGCNIRLVDAIQGHSAESDAAGYHHSETSEMLEAISKLDLKGLADSVPM
AEQPADA

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62468; Mature: 62468

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRISRPMKRAGTKNEQFKKRVPTALLPVLRGKKFAVDLPQTVAPDSPTYTVTVTLSDM
CCEECCCCHHHCCCCCHHHHHHCCHHHHHHHCCCEEEECCCHHCCCCCCCEEEEEEEHHH
ITFSLGAPASRLAAIRYAAALGHVEAFLEAAQRGPEDLSHLQITALLGDVHKALLAQYEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NPPARHKVVVDGGVEEWSELSEWQDMIADAEVAVLTMTPQGRAAAISRVRRIIDMDAFLS
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
ARALLLSDKSYRDLVEGLPAILRRVVETLSNRSQGNYSADPYAPQYPQWKAKTAAKQRAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
DGDVKTFDDLFDRWKAADKRAASTLSTWRGYLARFKQFVGHDDPHRVERVDALRWKDALV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AEGLKKISTTYLAALNTLYRFGLNNSETTGITRNPFDGVKAPQKATAGTKRLPFTRVEVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHEEEE
VILNAGRKEKLAHLRWIPWLQAQTGSRVAEIAQLWATMVITDDAGHPCLHITTAPDGGSL
EEECCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCC
KNEGSERVVPIHPDLIEDGFLEFVKTRGKGPLFYGGSKGKAAVRLRDDQKHPSKGVSNRV
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCCCCHHHHH
GTWVRGLGITDPRKGPTHSFRHWFKSELPRRSGCNIRLVDAIQGHSAESDAAGYHHSETS
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
EMLEAISKLDLKGLADSVPMAEQPADA
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVMRISRPMKRAGTKNEQFKKRVPTALLPVLRGKKFAVDLPQTVAPDSPTYTVTVTLSDM
CCEECCCCHHHCCCCCHHHHHHCCHHHHHHHCCCEEEECCCHHCCCCCCCEEEEEEEHHH
ITFSLGAPASRLAAIRYAAALGHVEAFLEAAQRGPEDLSHLQITALLGDVHKALLAQYEA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NPPARHKVVVDGGVEEWSELSEWQDMIADAEVAVLTMTPQGRAAAISRVRRIIDMDAFLS
CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
ARALLLSDKSYRDLVEGLPAILRRVVETLSNRSQGNYSADPYAPQYPQWKAKTAAKQRAT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
DGDVKTFDDLFDRWKAADKRAASTLSTWRGYLARFKQFVGHDDPHRVERVDALRWKDALV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AEGLKKISTTYLAALNTLYRFGLNNSETTGITRNPFDGVKAPQKATAGTKRLPFTRVEVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHEEEE
VILNAGRKEKLAHLRWIPWLQAQTGSRVAEIAQLWATMVITDDAGHPCLHITTAPDGGSL
EEECCCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCC
KNEGSERVVPIHPDLIEDGFLEFVKTRGKGPLFYGGSKGKAAVRLRDDQKHPSKGVSNRV
CCCCCCCEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCCCCHHHHH
GTWVRGLGITDPRKGPTHSFRHWFKSELPRRSGCNIRLVDAIQGHSAESDAAGYHHSETS
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
EMLEAISKLDLKGLADSVPMAEQPADA
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA