Click here to switch to the map view.

The map label for this gene is rfbV [H]

Identifier: 209551786

GI number: 209551786

Start: 4392767

End: 4394005

Strand: Reverse

Name: rfbV [H]

Synonym: Rleg2_4215

Alternate gene names: 209551786

Gene position: 4394005-4392767 (Counterclockwise)

Preceding gene: 209551787

Following gene: 209551784

Centisome position: 96.83

GC content: 56.82

Gene sequence:

>1239_bases
TTGAGCGGCATCAAACTCAGCATTTGCATCCCGACCTACAATCGTGAAGCCTATCTCAGAAACTCGCTGACCTACTGCGA
GAACGACTACAGGTTCGACTTTCCCTTTGAAGTCGTCATTTGCGACAATGCCTCCACGGATGGTACGCAGCAGGTGGTCG
AGGAATTCATCAGCCGCGGGCTGCCGATCCGCTACTACAAGCGTGAAACCAACGCCGGCGCCGCGGCGAACGTCACGAGC
GCTCTGCGCCTCGGCAAGGGCGAATATCTCATCTACCTGGCCGACGACGATATCCTGATTGCCGATGCGGTGGCCGATAC
CGTCTTATATCTCGACAACAATCCGGAAGTGACCTGCGCCCATGCGCCGTGGTTCCTCTACGACGAAGTCGCTAAAACCG
ACATCATGAAGTTCTACAATGTCGAGGAAGATCGGAAATTTCAGCGCGGCAGCTTTGGCGACGTCTTCCAATATCTCTGC
GAACGCCACATCTTTCCGGAAATCGCGATCTACCGCTCGTCAACGCTGCGGTCGGCCTGGGTCCCGCGGGAGTTCTGCTT
CTACCCGTTCGCGTTTTTTGCGCATTTTCTCGATCAGGGCGCGGTTACTTTCCTGCAGCGCCCGTTCTACCGCTCGATCG
CCAATTCGGCGATCACCCGCGATCGCCCGCAGGAAGGCACCAATGACGTCATGACGAGCTGGGATCGCTATCGTGGCGGG
CTTGAATATTTCCTCTATACGGGCGTCAGGCGCGGGGCGCTGGCCCTGACGCCCGAGACGCGTCTCAAATATGACGAGAT
GTGCAGGATCTTCACGCTCAATCGAATGGCGGTCGCCTTCCGCTTCTGGGCAGAGCGCAAAAATTTCATCAAGGCCTATG
AACTCTATACCCGCATCATGTGGGGCGGGATGCTCGACCACCCGGAAATCCGCGCCTTCCGTGAAAGGCTACCCCTGATG
GTCGTCATTCAGACGCTGGTGAGCGAAGTGAATTCGGCAATCGGTATCGATACGCTGCTTCTTGCCGGCTTCTCGGAAAT
CGCGGTGCTCGAAGACCTGATGCGCGAACTCGGTCTCAATGAAAAAGTAAGGTTTACCACAGAACTCAGCGACCGCGCGC
TCGATAGCACCGCGGTCTTCGTCACCGTCGACAGAGACCGGGAATATTTCGTAGCCCTCGGCTACCTGCCCAATCTGGTG
TTCCACGAGCACGATCTTGCCCGGCACATTATCATGTGA

Upstream 100 bases:

>100_bases
GCTGGGACGATCCCGCCTTTTCCATCGCCTGGCCGTTCGCGCCGAGCGTCATCAGCGAGCGCGACGCCGTGCTTGAAAGC
TATAGCCAGGAAACAAGCGT

Downstream 100 bases:

>100_bases
GCCTCGCGCCAGTTTCAAAAACTAGCGTCGTGGCGGGCGCCTGCGATAGCCTGCCCATTTAAGCCCGTGATGCTCCCAGT
TCTTTCTCAAGGATCAGAAG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSGIKLSICIPTYNREAYLRNSLTYCENDYRFDFPFEVVICDNASTDGTQQVVEEFISRGLPIRYYKRETNAGAAANVTS
ALRLGKGEYLIYLADDDILIADAVADTVLYLDNNPEVTCAHAPWFLYDEVAKTDIMKFYNVEEDRKFQRGSFGDVFQYLC
ERHIFPEIAIYRSSTLRSAWVPREFCFYPFAFFAHFLDQGAVTFLQRPFYRSIANSAITRDRPQEGTNDVMTSWDRYRGG
LEYFLYTGVRRGALALTPETRLKYDEMCRIFTLNRMAVAFRFWAERKNFIKAYELYTRIMWGGMLDHPEIRAFRERLPLM
VVIQTLVSEVNSAIGIDTLLLAGFSEIAVLEDLMRELGLNEKVRFTTELSDRALDSTAVFVTVDRDREYFVALGYLPNLV
FHEHDLARHIIM

Sequences:

>Translated_412_residues
MSGIKLSICIPTYNREAYLRNSLTYCENDYRFDFPFEVVICDNASTDGTQQVVEEFISRGLPIRYYKRETNAGAAANVTS
ALRLGKGEYLIYLADDDILIADAVADTVLYLDNNPEVTCAHAPWFLYDEVAKTDIMKFYNVEEDRKFQRGSFGDVFQYLC
ERHIFPEIAIYRSSTLRSAWVPREFCFYPFAFFAHFLDQGAVTFLQRPFYRSIANSAITRDRPQEGTNDVMTSWDRYRGG
LEYFLYTGVRRGALALTPETRLKYDEMCRIFTLNRMAVAFRFWAERKNFIKAYELYTRIMWGGMLDHPEIRAFRERLPLM
VVIQTLVSEVNSAIGIDTLLLAGFSEIAVLEDLMRELGLNEKVRFTTELSDRALDSTAVFVTVDRDREYFVALGYLPNLV
FHEHDLARHIIM
>Mature_411_residues
SGIKLSICIPTYNREAYLRNSLTYCENDYRFDFPFEVVICDNASTDGTQQVVEEFISRGLPIRYYKRETNAGAAANVTSA
LRLGKGEYLIYLADDDILIADAVADTVLYLDNNPEVTCAHAPWFLYDEVAKTDIMKFYNVEEDRKFQRGSFGDVFQYLCE
RHIFPEIAIYRSSTLRSAWVPREFCFYPFAFFAHFLDQGAVTFLQRPFYRSIANSAITRDRPQEGTNDVMTSWDRYRGGL
EYFLYTGVRRGALALTPETRLKYDEMCRIFTLNRMAVAFRFWAERKNFIKAYELYTRIMWGGMLDHPEIRAFRERLPLMV
VIQTLVSEVNSAIGIDTLLLAGFSEIAVLEDLMRELGLNEKVRFTTELSDRALDSTAVFVTVDRDREYFVALGYLPNLVF
HEHDLARHIIM

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 47816; Mature: 47685

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIKLSICIPTYNREAYLRNSLTYCENDYRFDFPFEVVICDNASTDGTQQVVEEFISRG
CCCCEEEEEEECCCCHHHHHCCHHHCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHCC
LPIRYYKRETNAGAAANVTSALRLGKGEYLIYLADDDILIADAVADTVLYLDNNPEVTCA
CCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCEEEE
HAPWFLYDEVAKTDIMKFYNVEEDRKFQRGSFGDVFQYLCERHIFPEIAIYRSSTLRSAW
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHEEECCCHHHHHC
VPREFCFYPFAFFAHFLDQGAVTFLQRPFYRSIANSAITRDRPQEGTNDVMTSWDRYRGG
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHCC
LEYFLYTGVRRGALALTPETRLKYDEMCRIFTLNRMAVAFRFWAERKNFIKAYELYTRIM
HHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGMLDHPEIRAFRERLPLMVVIQTLVSEVNSAIGIDTLLLAGFSEIAVLEDLMRELGLN
HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EKVRFTTELSDRALDSTAVFVTVDRDREYFVALGYLPNLVFHEHDLARHIIM
CCEEEEECHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGIKLSICIPTYNREAYLRNSLTYCENDYRFDFPFEVVICDNASTDGTQQVVEEFISRG
CCCEEEEEEECCCCHHHHHCCHHHCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHCC
LPIRYYKRETNAGAAANVTSALRLGKGEYLIYLADDDILIADAVADTVLYLDNNPEVTCA
CCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCEEEEECCCCCEEEE
HAPWFLYDEVAKTDIMKFYNVEEDRKFQRGSFGDVFQYLCERHIFPEIAIYRSSTLRSAW
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHEEECCCHHHHHC
VPREFCFYPFAFFAHFLDQGAVTFLQRPFYRSIANSAITRDRPQEGTNDVMTSWDRYRGG
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHCC
LEYFLYTGVRRGALALTPETRLKYDEMCRIFTLNRMAVAFRFWAERKNFIKAYELYTRIM
HHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGGMLDHPEIRAFRERLPLMVVIQTLVSEVNSAIGIDTLLLAGFSEIAVLEDLMRELGLN
HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EKVRFTTELSDRALDSTAVFVTVDRDREYFVALGYLPNLVFHEHDLARHIIM
CCEEEEECHHHHCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]