| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551783
Identifier: 209551783
GI number: 209551783
Start: 4389852
End: 4390610
Strand: Reverse
Name: 209551783
Synonym: Rleg2_4212
Alternate gene names: NA
Gene position: 4390610-4389852 (Counterclockwise)
Preceding gene: 209551784
Following gene: 209551780
Centisome position: 96.75
GC content: 59.03
Gene sequence:
>759_bases ATGACCACGAAGGACGATCGTCTCGAATTCGAAGCCCACAAGCGGGAAATGTCGCTTGCGCTCGGCAAGGATGAGGCAAG TTTCCAACAATCGCTGAACACACTGATCGGGCTCGATAAGTTCGACTATTCCTATCTCTGGTCATGGATGGGCGTGCCTA TCATCCAGCTTCCGGTCGATATCCTGGCAACCCAGGAAGTCATCTGGGCGACCAAGCCCGATGTCATCATCGAAACCGGC ATCGCGCGCGGCGGCTCGCTAATCTTCATGGCGTCGATCCTCGCTGCCATGGGCAACGACGCGGCCAAGGTTGTCGGCGT CGACATCGACATCCGCGCCCATAATCGCGAGTCGATCGAATCCCATCCGATGTCGAGCCGGATCAAGATGATCCAGGGCG GTTCCGTCGACGACGAGGTGCTTGCTGCCGTGAAAGCCGAGATCCCGCCGGGCGCCCGTGTGATGGTAGTGCTCGACAGC GACCATTCCTACGAGCATGTTCTGGCGGAATGCCGCGCCTACGGTCCGCTGGTGACGGAAGGTTGCTACTTGGTCGTCGC CGACACGTTCATCGGTCACCTGAGCGAAGAACAGGCTTTCACAAAACGTTCCAAGGTCTGGCTGCGCGGCAATGAGCCGC TGAAGGCCATCACCGATTATCTGGCGGAAACCGACCGCTTCGAAGTTGATCCGGTTCTGAACGGCAAGCTCGTGCTGTCT TCCTCGCCGGGCGGTTACTGCGTCTGCCGCAAGACGTGA
Upstream 100 bases:
>100_bases AACGTTGCTCGATGTGGCGGCAGGGCGGATCTATCACAACAGCAAGGCATTACGGCAGTCGGGCTAAGGCAGCCCCTACA ACGAAGGACAAGAAACAGTC
Downstream 100 bases:
>100_bases GCGGACAATCAGGGATCGTCGTTTCGACTATCTGAGGACGGAGTTTCCGATCGAACGTTTCCGGCAAGCGCATCCGGCGG CTTTGCCGACAGGCCAAAGC
Product: Cephalosporin hydroxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTTKDDRLEFEAHKREMSLALGKDEASFQQSLNTLIGLDKFDYSYLWSWMGVPIIQLPVDILATQEVIWATKPDVIIETG IARGGSLIFMASILAAMGNDAAKVVGVDIDIRAHNRESIESHPMSSRIKMIQGGSVDDEVLAAVKAEIPPGARVMVVLDS DHSYEHVLAECRAYGPLVTEGCYLVVADTFIGHLSEEQAFTKRSKVWLRGNEPLKAITDYLAETDRFEVDPVLNGKLVLS SSPGGYCVCRKT
Sequences:
>Translated_252_residues MTTKDDRLEFEAHKREMSLALGKDEASFQQSLNTLIGLDKFDYSYLWSWMGVPIIQLPVDILATQEVIWATKPDVIIETG IARGGSLIFMASILAAMGNDAAKVVGVDIDIRAHNRESIESHPMSSRIKMIQGGSVDDEVLAAVKAEIPPGARVMVVLDS DHSYEHVLAECRAYGPLVTEGCYLVVADTFIGHLSEEQAFTKRSKVWLRGNEPLKAITDYLAETDRFEVDPVLNGKLVLS SSPGGYCVCRKT >Mature_251_residues TTKDDRLEFEAHKREMSLALGKDEASFQQSLNTLIGLDKFDYSYLWSWMGVPIIQLPVDILATQEVIWATKPDVIIETGI ARGGSLIFMASILAAMGNDAAKVVGVDIDIRAHNRESIESHPMSSRIKMIQGGSVDDEVLAAVKAEIPPGARVMVVLDSD HSYEHVLAECRAYGPLVTEGCYLVVADTFIGHLSEEQAFTKRSKVWLRGNEPLKAITDYLAETDRFEVDPVLNGKLVLSS SPGGYCVCRKT
Specific function: Catalyzes the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) [H]
COG id: COG3510
COG function: function code V; Cephalosporin hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rhamnosyl O-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007072 [H]
Pfam domain/function: PF04989 CmcI [H]
EC number: NA
Molecular weight: Translated: 27746; Mature: 27615
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKDDRLEFEAHKREMSLALGKDEASFQQSLNTLIGLDKFDYSYLWSWMGVPIIQLPVD CCCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECHH ILATQEVIWATKPDVIIETGIARGGSLIFMASILAAMGNDAAKVVGVDIDIRAHNRESIE HHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHH SHPMSSRIKMIQGGSVDDEVLAAVKAEIPPGARVMVVLDSDHSYEHVLAECRAYGPLVTE CCCCHHHEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHC GCYLVVADTFIGHLSEEQAFTKRSKVWLRGNEPLKAITDYLAETDRFEVDPVLNGKLVLS CEEEEEEHHHHHHCCHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCEEEEE SSPGGYCVCRKT CCCCCEEEEECC >Mature Secondary Structure TTKDDRLEFEAHKREMSLALGKDEASFQQSLNTLIGLDKFDYSYLWSWMGVPIIQLPVD CCCCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECHH ILATQEVIWATKPDVIIETGIARGGSLIFMASILAAMGNDAAKVVGVDIDIRAHNRESIE HHHCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCHH SHPMSSRIKMIQGGSVDDEVLAAVKAEIPPGARVMVVLDSDHSYEHVLAECRAYGPLVTE CCCCHHHEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHC GCYLVVADTFIGHLSEEQAFTKRSKVWLRGNEPLKAITDYLAETDRFEVDPVLNGKLVLS CEEEEEEHHHHHHCCHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCEEEEE SSPGGYCVCRKT CCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]