| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pepA [H]
Identifier: 209551767
GI number: 209551767
Start: 4370407
End: 4371798
Strand: Direct
Name: pepA [H]
Synonym: Rleg2_4196
Alternate gene names: 209551767
Gene position: 4370407-4371798 (Clockwise)
Preceding gene: 209551765
Following gene: 209551768
Centisome position: 96.31
GC content: 63.36
Gene sequence:
>1392_bases ATGGCCCCCTATCAGTTTATCGAGAGATCGACCCCTTTCAACGCGAAGGGCGGTTCGACGCTGCCGATCTTCGCCGTCAC CCCTGCCCATATCGAGACCGGCACGATCGATCCGATCGCGCTCGATTGGGCGCAGAGGGCGGGCTACAAGGCCGAAAGCG GGTCGCTGCTCTTGATCCCGACGGCCGACGGCCATCTCGGCGGCGCGCTTTTCGGTCTCGGCACCAATCCATCCGAGCAG CCCTATATCACCGGCAGGCTCGCGCGGGCGCTGCCCGCCGGCGACTGGCACATCGAGACCGCACCGCTGACGGCAAACCG CCTGGCTCTTGGTTTTGGTCTCGGCAGCTATCGTTTCGACCGTTACAAGTCTGAAAAATCGCCTGCGGCGACGCTGATGA TCCCCCGCGATGCCGACAGTGCCGACATCAAGCGCCAGCTCGCCGGCGTCTTTCTCGCCCGCGACCTCATCAATACGCCG ACGAACGACATGGGGCCGAACCAGCTCGAAACCGTGTTCCGTGGCTTGGCTGCACATTACAAGGCTGATGTATCGGTTAT CACCGGCGACGAGCTGCTCGAGCAGAATTTCCCCCTCGTCCATACCGTCGGCCGCGCCAGCGCCGATGCACCACGCCTTC TCGAACTACGCTGGGGCAAGAAGGGCCATCGCAAGGTGACGCTCGTCGGCAAGGGTGTCTGCTTCGATACCGGCGGTCTC GATATCAAGCCCGCCGCCTCCATGCTGCTGATGAAGAAGGACATGGGCGGCGCGGCGAACGTCATGGGCCTTGCCCTGAT GATCATGGACGCCAAGCTGAAAGTCGATCTGCGTGTCATCGTCCCGGTCGTCGAAAACGCCATCTCGTCCAATGCCTTCC GCCCCGGCGACATTTATAAGAGCCGCAAGGGCCTGACCGTCCAGATCGACAATACCGACGCCGAAGGCCGTCTGATCCTT GCCGATGCGCTTGCCTATGCCGACGAGGAAGAGCCCGATCTCCTGATCGACATGGCGACGCTGACCGGTGCTGCCCGCGT CGCCCTCGGTCCGGACCTCCCGCCCTTCTTCACCGATGACGCCAATCTGGCGCATGACCTGACCGAAGCGAGCCTGGAAA CGGACGATCCGATCTGGCGGCTGCCGCTCTATTCCGGTTACGAAAAGGATATCCGCACCAAATTCGCCGATCTCACCAAC GCGCCGGCCGGCGGCATGGCGGGGGCGATCACCGCGGCGCTCTTCCTCAAGCGTTTCGTCGGCAAGACGAAGAGCTGGGC GCATTTCGACATTTACGGCTGGGCGCAATCCGAGCGGCCGCATTCGCCGGGCGGCGGTGAAGCGCAGGCCATCCGCGCGC TCTTCCATCATATCCGCGAGAGCCTGCGCTGA
Upstream 100 bases:
>100_bases GGAACAGGGAAAGGTTTGACGCAATCTTCGCTCCAGCAATAGTCTGTTAACCCTAACAGACCGTTAAGGAGTGATTCCTT GCGACCGCCGAAGGACAATC
Downstream 100 bases:
>100_bases CGGCTGCAAACGAGGGCTGAGGGGCGGTGGCATAGTCAAGCATTGCCCCTCCCTGCTGATCGTTAAAATTTTATTCACCC TGCCGGGCGGCAATTCCTGC
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MAPYQFIERSTPFNAKGGSTLPIFAVTPAHIETGTIDPIALDWAQRAGYKAESGSLLLIPTADGHLGGALFGLGTNPSEQ PYITGRLARALPAGDWHIETAPLTANRLALGFGLGSYRFDRYKSEKSPAATLMIPRDADSADIKRQLAGVFLARDLINTP TNDMGPNQLETVFRGLAAHYKADVSVITGDELLEQNFPLVHTVGRASADAPRLLELRWGKKGHRKVTLVGKGVCFDTGGL DIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENAISSNAFRPGDIYKSRKGLTVQIDNTDAEGRLIL ADALAYADEEEPDLLIDMATLTGAARVALGPDLPPFFTDDANLAHDLTEASLETDDPIWRLPLYSGYEKDIRTKFADLTN APAGGMAGAITAALFLKRFVGKTKSWAHFDIYGWAQSERPHSPGGGEAQAIRALFHHIRESLR
Sequences:
>Translated_463_residues MAPYQFIERSTPFNAKGGSTLPIFAVTPAHIETGTIDPIALDWAQRAGYKAESGSLLLIPTADGHLGGALFGLGTNPSEQ PYITGRLARALPAGDWHIETAPLTANRLALGFGLGSYRFDRYKSEKSPAATLMIPRDADSADIKRQLAGVFLARDLINTP TNDMGPNQLETVFRGLAAHYKADVSVITGDELLEQNFPLVHTVGRASADAPRLLELRWGKKGHRKVTLVGKGVCFDTGGL DIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENAISSNAFRPGDIYKSRKGLTVQIDNTDAEGRLIL ADALAYADEEEPDLLIDMATLTGAARVALGPDLPPFFTDDANLAHDLTEASLETDDPIWRLPLYSGYEKDIRTKFADLTN APAGGMAGAITAALFLKRFVGKTKSWAHFDIYGWAQSERPHSPGGGEAQAIRALFHHIRESLR >Mature_462_residues APYQFIERSTPFNAKGGSTLPIFAVTPAHIETGTIDPIALDWAQRAGYKAESGSLLLIPTADGHLGGALFGLGTNPSEQP YITGRLARALPAGDWHIETAPLTANRLALGFGLGSYRFDRYKSEKSPAATLMIPRDADSADIKRQLAGVFLARDLINTPT NDMGPNQLETVFRGLAAHYKADVSVITGDELLEQNFPLVHTVGRASADAPRLLELRWGKKGHRKVTLVGKGVCFDTGGLD IKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENAISSNAFRPGDIYKSRKGLTVQIDNTDAEGRLILA DALAYADEEEPDLLIDMATLTGAARVALGPDLPPFFTDDANLAHDLTEASLETDDPIWRLPLYSGYEKDIRTKFADLTNA PAGGMAGAITAALFLKRFVGKTKSWAHFDIYGWAQSERPHSPGGGEAQAIRALFHHIRESLR
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=375, Percent_Identity=37.0666666666667, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI47155554, Length=295, Percent_Identity=32.5423728813559, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI87082123, Length=323, Percent_Identity=38.0804953560372, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1790710, Length=288, Percent_Identity=39.5833333333333, Blast_Score=189, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17556903, Length=293, Percent_Identity=37.2013651877133, Blast_Score=141, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17565172, Length=215, Percent_Identity=32.5581395348837, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI21355725, Length=339, Percent_Identity=31.5634218289086, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24661038, Length=282, Percent_Identity=34.0425531914894, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI221379063, Length=292, Percent_Identity=35.2739726027397, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI221379062, Length=292, Percent_Identity=35.2739726027397, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI21357381, Length=292, Percent_Identity=35.2739726027397, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24662227, Length=341, Percent_Identity=26.099706744868, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI20129969, Length=342, Percent_Identity=27.4853801169591, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355645, Length=363, Percent_Identity=23.4159779614325, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24662223, Length=363, Percent_Identity=23.4159779614325, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI19922386, Length=324, Percent_Identity=26.2345679012346, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI161077148, Length=286, Percent_Identity=29.020979020979, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI20130057, Length=286, Percent_Identity=29.020979020979, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI20129963, Length=335, Percent_Identity=27.1641791044776, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI24646701, Length=217, Percent_Identity=35.0230414746544, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24646703, Length=217, Percent_Identity=35.0230414746544, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI21358201, Length=217, Percent_Identity=35.0230414746544, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 49954; Mature: 49822
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPYQFIERSTPFNAKGGSTLPIFAVTPAHIETGTIDPIALDWAQRAGYKAESGSLLLIP CCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCCCCCEEEEE TADGHLGGALFGLGTNPSEQPYITGRLARALPAGDWHIETAPLTANRLALGFGLGSYRFD CCCCCCCCEEEECCCCCCCCCEEHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCHHHH RYKSEKSPAATLMIPRDADSADIKRQLAGVFLARDLINTPTNDMGPNQLETVFRGLAAHY HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KADVSVITGDELLEQNFPLVHTVGRASADAPRLLELRWGKKGHRKVTLVGKGVCFDTGGL HCCEEEEECHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCEEEECCCC DIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENAISSNAFRPGDIYK CCCHHHHHHEEHHCCCCHHHHHHHHHHEECCCEEEEEEEEHHHHHHHHHCCCCCCCHHHH SRKGLTVQIDNTDAEGRLILADALAYADEEEPDLLIDMATLTGAARVALGPDLPPFFTDD CCCCCEEEECCCCCCCEEEEEEHHHHCCCCCCCEEEEEHHHCCCEEEEECCCCCCCCCCC ANLAHDLTEASLETDDPIWRLPLYSGYEKDIRTKFADLTNAPAGGMAGAITAALFLKRFV CHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GKTKSWAHFDIYGWAQSERPHSPGGGEAQAIRALFHHIRESLR CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure APYQFIERSTPFNAKGGSTLPIFAVTPAHIETGTIDPIALDWAQRAGYKAESGSLLLIP CCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCCCCCEEEEE TADGHLGGALFGLGTNPSEQPYITGRLARALPAGDWHIETAPLTANRLALGFGLGSYRFD CCCCCCCCEEEECCCCCCCCCEEHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCHHHH RYKSEKSPAATLMIPRDADSADIKRQLAGVFLARDLINTPTNDMGPNQLETVFRGLAAHY HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH KADVSVITGDELLEQNFPLVHTVGRASADAPRLLELRWGKKGHRKVTLVGKGVCFDTGGL HCCEEEEECHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEEECCEEEECCCC DIKPAASMLLMKKDMGGAANVMGLALMIMDAKLKVDLRVIVPVVENAISSNAFRPGDIYK CCCHHHHHHEEHHCCCCHHHHHHHHHHEECCCEEEEEEEEHHHHHHHHHCCCCCCCHHHH SRKGLTVQIDNTDAEGRLILADALAYADEEEPDLLIDMATLTGAARVALGPDLPPFFTDD CCCCCEEEECCCCCCCEEEEEEHHHHCCCCCCCEEEEEHHHCCCEEEEECCCCCCCCCCC ANLAHDLTEASLETDDPIWRLPLYSGYEKDIRTKFADLTNAPAGGMAGAITAALFLKRFV CHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GKTKSWAHFDIYGWAQSERPHSPGGGEAQAIRALFHHIRESLR CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA