| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551670
Identifier: 209551670
GI number: 209551670
Start: 4274863
End: 4275561
Strand: Reverse
Name: 209551670
Synonym: Rleg2_4099
Alternate gene names: NA
Gene position: 4275561-4274863 (Counterclockwise)
Preceding gene: 209551671
Following gene: 209551669
Centisome position: 94.22
GC content: 61.95
Gene sequence:
>699_bases GTGAAAAATCTCATTGTTAAAATCGCCGCGGCTGGCCTGTTTGTGCTGGCGCCGGTGATCGCACAGGCCGCCGAGGGCTA CTCAACGGCGAACGTCAACATGCGAGCGGGTCCGAGCACCCGCTACCCTGCCGTCGCAGTCGTGCCTGCCGGTTCCCCCG TCGAAATTCGTGGATGTCTTTCCAACGTCAACTGGTGCGACGTCGAATTCTATGGCGGTCGCGGCTGGGTGTCCGGCCAA TATGTACAGGCCGTCTACCAGCAACGCCGTGTCTATGTCGGTCCGCAATATTACCGCCCGCTCGGCATTCCGATGATCAG CTTCAGTGTCGGCAATTATTGGGACCGCAACTACCGCGACCGCGATTTCTACCGCGAGCGCGACCGCTGGAGCCGCGGCC CTGATTATTACTACCGTAACCGGGATCGGGATCGCGACTACGAAGACCGCAACCGGGATCGCGATTACGGGGATCGCAAT CGGGATCGCGACCGGGACTGGCGCGACGACAATCGAAGGGACGACCGCAGAGACGAAAGCCGCAGGTCGGACCGTCGGGA TGACAACAGAGGTAACACCAGGAGTTCGGATTTCCGCGACCTGCCGCAGTTCAAGGGCGGGAAGGCCGATACCTACAATC GCCCGGACCCCAGGGCTTCGCCCTTCGTCTGCCGCCCGGGCGATCCGTCCTGCGACTGA
Upstream 100 bases:
>100_bases AACAAATGCGGGCGATCGCTCTATCTTTCCTACAGATGGCATATGCCAAGAAAAGGCAGCGCCGCGCTGCCTGAAAACGC GCCAACCAGGAGTGAGAAGC
Downstream 100 bases:
>100_bases GATATCAGGAGCGGCGGCCGCAAGGCCGCCGCTTATCTTAATGACAGCGTCCTTCGCGCGGAAAAGGCGAGAAGGGCGCT ATAAGAAAAAGCCCGGCGCT
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: SH3 Type 3 Domain-Containing Protein
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKNLIVKIAAAGLFVLAPVIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCLSNVNWCDVEFYGGRGWVSGQ YVQAVYQQRRVYVGPQYYRPLGIPMISFSVGNYWDRNYRDRDFYRERDRWSRGPDYYYRNRDRDRDYEDRNRDRDYGDRN RDRDRDWRDDNRRDDRRDESRRSDRRDDNRGNTRSSDFRDLPQFKGGKADTYNRPDPRASPFVCRPGDPSCD
Sequences:
>Translated_232_residues MKNLIVKIAAAGLFVLAPVIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCLSNVNWCDVEFYGGRGWVSGQ YVQAVYQQRRVYVGPQYYRPLGIPMISFSVGNYWDRNYRDRDFYRERDRWSRGPDYYYRNRDRDRDYEDRNRDRDYGDRN RDRDRDWRDDNRRDDRRDESRRSDRRDDNRGNTRSSDFRDLPQFKGGKADTYNRPDPRASPFVCRPGDPSCD >Mature_232_residues MKNLIVKIAAAGLFVLAPVIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCLSNVNWCDVEFYGGRGWVSGQ YVQAVYQQRRVYVGPQYYRPLGIPMISFSVGNYWDRNYRDRDFYRERDRWSRGPDYYYRNRDRDRDYEDRNRDRDYGDRN RDRDRDWRDDNRRDDRRDESRRSDRRDDNRGNTRSSDFRDLPQFKGGKADTYNRPDPRASPFVCRPGDPSCD
Specific function: Unknown
COG id: COG4991
COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27258; Mature: 27258
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLIVKIAAAGLFVLAPVIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCL CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCEEHHHHH SNVNWCDVEFYGGRGWVSGQYVQAVYQQRRVYVGPQYYRPLGIPMISFSVGNYWDRNYRD CCCCEEEEEEECCCCCCCHHHHHHHHHHCEEEECCHHHCCCCCCEEEEECCCCCCCCCCC RDFYRERDRWSRGPDYYYRNRDRDRDYEDRNRDRDYGDRNRDRDRDWRDDNRRDDRRDES HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RRSDRRDDNRGNTRSSDFRDLPQFKGGKADTYNRPDPRASPFVCRPGDPSCD HHHHCCCCCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MKNLIVKIAAAGLFVLAPVIAQAAEGYSTANVNMRAGPSTRYPAVAVVPAGSPVEIRGCL CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCEEHHHHH SNVNWCDVEFYGGRGWVSGQYVQAVYQQRRVYVGPQYYRPLGIPMISFSVGNYWDRNYRD CCCCEEEEEEECCCCCCCHHHHHHHHHHCEEEECCHHHCCCCCCEEEEECCCCCCCCCCC RDFYRERDRWSRGPDYYYRNRDRDRDYEDRNRDRDYGDRNRDRDRDWRDDNRRDDRRDES HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RRSDRRDDNRGNTRSSDFRDLPQFKGGKADTYNRPDPRASPFVCRPGDPSCD HHHHCCCCCCCCCCCCHHHHCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA