| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209551642
Identifier: 209551642
GI number: 209551642
Start: 4247299
End: 4248930
Strand: Direct
Name: 209551642
Synonym: Rleg2_4071
Alternate gene names: NA
Gene position: 4247299-4248930 (Clockwise)
Preceding gene: 209551631
Following gene: 209551643
Centisome position: 93.6
GC content: 64.95
Gene sequence:
>1632_bases GTGGCCTACACTTCGTCGACATTGGCGCCTTTGCGGCACGATACCTACCGCACCATCTGGTTCGCCAGCCTGTCGTCGAA TTTCGGCGGCCTGATCCAGGCGGTCGGTGCCGCCTGGATGATGACGACGATCACCGCCTCGGAGGACATGGTCGCGCTGG TGCAGACCTCGACGGCGCTGCCGATCATGCTGTTTTCGCTGATTTCAGGGGCGCTCGCCGACAATTACGATCGCCGCCGG GTGATGCTGACTGCGCAGTGTATGATGCTGACAGTCTCGGCGCTTTTGACGGCCACGGCCCTTCTCGGCTGGATCACACC CTGGCTGCTGCTCTTCTTCACCTTCCTGATCGGCTGCGGCACCGCGCTCAACAACCCTTCCTGGCAGGCCTCGGTCGGCG ACATGGTGCCGCGCGCCGATCTGCCGGGCGCCGTCACGCTGAACAGCATGGGTTTCAACATTACCCGCAGCGTCGGCCCG GCCATCGGCGGTGTCATCGTCGCCGCCGCCGGCGCGGCGGCGGCCTTCGCGGTGAACACCGTGAGCTACCTCGCTTTGAT CTATGCCCTGCTGCGCTGGCGCCCAAGCACGCCGGTCTCGACCCTGCCGCGCGAGGCGCTCGGCAGCGCCATCTTCGCCG GCCTGCGTTATGTCTCGATGTCGCCCAATCTCGAAAAGGTTCTCCTCCGGGGGCTGCTCTTCGGCATCGGCGCCAGCTCG ATCCTGGCGCTGCTGCCGGTCGTGGCACTCGATCTCGTCGGCGGCGGCCCGCTGACCTATGGTTTCATGCTCGGCGCCTT CGGCATCGGCGCGATCGGCGGCGCGGTGTTGAATGCGCGGCTGCGCCAGATGCTGTCGAGCGAGATGATCATCCGTCTGG CCTTTACAGGCTTCGCGCTGAGCGCCGTCATCGCTGCCTTCAGCCCAAGCGCAGTGCTGACCTCGGCCGGGTTGCTCATC TCCGGCGCCTGCTGGGTCTCCGCACTGTCGCTCTTCAACACCATCGTCCAGCTGTCGACGCCGCGCTGGGTGGTGGGACG GGCGCTGTCGCTCTACCAGACCGTCACCTTCGGCGGCATCGCCGGCGGCAGCTGGCTCTGGGGTGTGGCCGCCGATCGCT ACGGTGTCGCCGACGCGCTGCTGATGTCATCGGTCGTCATGCTGCTCGGCATCGTGATCGGCCTGCGCTTTTCCATGCCG GCCTTTGCCTCGCTCAATCTCGATCCGCTGAACCGCTTCACCGAGCCGGCTCTCAGCCTCGACATCACCCCCCGCAGCGG CCCGATCGTCATCCAGGTCGATTATGAGATCGGAGATGACGACCTTGCCGAATTCATGCAGCTGATGGGCGAACGCCGCC GTATCCGCATCCGCGACGGCGCCCGCAACTGGGCTTTGATGCGCGATCTCGAAAATCCCGGGCTCTGGACGGAAACCTAC CATACGCCGACCTGGGTCGAATATATAAGACACAACCAGCGGCGCACGCAGGCCGATGCCGAAAACACCGACAGGCTTCG TGCGCTTCATCGCGGCGAAGGTCCGCTGCATGTCCACCGCATGATCGAACGCCAGGCCATTCCATCCGGCGACGACGTCT TCCATAAAGCGCCGATCGATCTGCATCATTGA
Upstream 100 bases:
>100_bases ATTCCGCCAATTCGTGCCGGGCGATGCCGGTGGGCCTTTGGCCAGCGCCGATCTTACGCATATATTGCCGTTGCGGCGCA ATAACAAAAGCGGAGAAATC
Downstream 100 bases:
>100_bases GGTGAGGCATGTATAATTTCAGGCTCGCCCGCCAATCCGATCTTGGCACCATCGTCCGGCTTCTGGCCGATGACGATCTC GGCGGTACCAGAGAGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; Transmembrane Efflux Protein; MFS Transporter; Arabinose Efflux Permease Family Protein; Multidrug ABC Transporter; Permease; Facilitator Superfamily; Facilitator Superfamily Transporter; Transport Transmembrane Protein; Drug Resistance Efflux Protein; Permeases Of Facilitator Superfamily; MFS Family Transporter Protein; Mfs Transporter; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Permease Of Facilitator Superfamily Protein; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Dioxygenase; MFS Family Diterpenoid Transporter; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MAYTSSTLAPLRHDTYRTIWFASLSSNFGGLIQAVGAAWMMTTITASEDMVALVQTSTALPIMLFSLISGALADNYDRRR VMLTAQCMMLTVSALLTATALLGWITPWLLLFFTFLIGCGTALNNPSWQASVGDMVPRADLPGAVTLNSMGFNITRSVGP AIGGVIVAAAGAAAAFAVNTVSYLALIYALLRWRPSTPVSTLPREALGSAIFAGLRYVSMSPNLEKVLLRGLLFGIGASS ILALLPVVALDLVGGGPLTYGFMLGAFGIGAIGGAVLNARLRQMLSSEMIIRLAFTGFALSAVIAAFSPSAVLTSAGLLI SGACWVSALSLFNTIVQLSTPRWVVGRALSLYQTVTFGGIAGGSWLWGVAADRYGVADALLMSSVVMLLGIVIGLRFSMP AFASLNLDPLNRFTEPALSLDITPRSGPIVIQVDYEIGDDDLAEFMQLMGERRRIRIRDGARNWALMRDLENPGLWTETY HTPTWVEYIRHNQRRTQADAENTDRLRALHRGEGPLHVHRMIERQAIPSGDDVFHKAPIDLHH
Sequences:
>Translated_543_residues MAYTSSTLAPLRHDTYRTIWFASLSSNFGGLIQAVGAAWMMTTITASEDMVALVQTSTALPIMLFSLISGALADNYDRRR VMLTAQCMMLTVSALLTATALLGWITPWLLLFFTFLIGCGTALNNPSWQASVGDMVPRADLPGAVTLNSMGFNITRSVGP AIGGVIVAAAGAAAAFAVNTVSYLALIYALLRWRPSTPVSTLPREALGSAIFAGLRYVSMSPNLEKVLLRGLLFGIGASS ILALLPVVALDLVGGGPLTYGFMLGAFGIGAIGGAVLNARLRQMLSSEMIIRLAFTGFALSAVIAAFSPSAVLTSAGLLI SGACWVSALSLFNTIVQLSTPRWVVGRALSLYQTVTFGGIAGGSWLWGVAADRYGVADALLMSSVVMLLGIVIGLRFSMP AFASLNLDPLNRFTEPALSLDITPRSGPIVIQVDYEIGDDDLAEFMQLMGERRRIRIRDGARNWALMRDLENPGLWTETY HTPTWVEYIRHNQRRTQADAENTDRLRALHRGEGPLHVHRMIERQAIPSGDDVFHKAPIDLHH >Mature_542_residues AYTSSTLAPLRHDTYRTIWFASLSSNFGGLIQAVGAAWMMTTITASEDMVALVQTSTALPIMLFSLISGALADNYDRRRV MLTAQCMMLTVSALLTATALLGWITPWLLLFFTFLIGCGTALNNPSWQASVGDMVPRADLPGAVTLNSMGFNITRSVGPA IGGVIVAAAGAAAAFAVNTVSYLALIYALLRWRPSTPVSTLPREALGSAIFAGLRYVSMSPNLEKVLLRGLLFGIGASSI LALLPVVALDLVGGGPLTYGFMLGAFGIGAIGGAVLNARLRQMLSSEMIIRLAFTGFALSAVIAAFSPSAVLTSAGLLIS GACWVSALSLFNTIVQLSTPRWVVGRALSLYQTVTFGGIAGGSWLWGVAADRYGVADALLMSSVVMLLGIVIGLRFSMPA FASLNLDPLNRFTEPALSLDITPRSGPIVIQVDYEIGDDDLAEFMQLMGERRRIRIRDGARNWALMRDLENPGLWTETYH TPTWVEYIRHNQRRTQADAENTDRLRALHRGEGPLHVHRMIERQAIPSGDDVFHKAPIDLHH
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58473; Mature: 58342
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTSSTLAPLRHDTYRTIWFASLSSNFGGLIQAVGAAWMMTTITASEDMVALVQTSTAL CCCCCCCCCHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHEEECCCCCEEEHHCCCHH PIMLFSLISGALADNYDRRRVMLTAQCMMLTVSALLTATALLGWITPWLLLFFTFLIGCG HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TALNNPSWQASVGDMVPRADLPGAVTLNSMGFNITRSVGPAIGGVIVAAAGAAAAFAVNT CCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH VSYLALIYALLRWRPSTPVSTLPREALGSAIFAGLRYVSMSPNLEKVLLRGLLFGIGASS HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHH ILALLPVVALDLVGGGPLTYGFMLGAFGIGAIGGAVLNARLRQMLSSEMIIRLAFTGFAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVIAAFSPSAVLTSAGLLISGACWVSALSLFNTIVQLSTPRWVVGRALSLYQTVTFGGI HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC AGGSWLWGVAADRYGVADALLMSSVVMLLGIVIGLRFSMPAFASLNLDPLNRFTEPALSL CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEE DITPRSGPIVIQVDYEIGDDDLAEFMQLMGERRRIRIRDGARNWALMRDLENPGLWTETY EECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC HTPTWVEYIRHNQRRTQADAENTDRLRALHRGEGPLHVHRMIERQAIPSGDDVFHKAPID CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEECCCC LHH CCC >Mature Secondary Structure AYTSSTLAPLRHDTYRTIWFASLSSNFGGLIQAVGAAWMMTTITASEDMVALVQTSTAL CCCCCCCCHHHCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHEEECCCCCEEEHHCCCHH PIMLFSLISGALADNYDRRRVMLTAQCMMLTVSALLTATALLGWITPWLLLFFTFLIGCG HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TALNNPSWQASVGDMVPRADLPGAVTLNSMGFNITRSVGPAIGGVIVAAAGAAAAFAVNT CCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH VSYLALIYALLRWRPSTPVSTLPREALGSAIFAGLRYVSMSPNLEKVLLRGLLFGIGASS HHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCHHH ILALLPVVALDLVGGGPLTYGFMLGAFGIGAIGGAVLNARLRQMLSSEMIIRLAFTGFAL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVIAAFSPSAVLTSAGLLISGACWVSALSLFNTIVQLSTPRWVVGRALSLYQTVTFGGI HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC AGGSWLWGVAADRYGVADALLMSSVVMLLGIVIGLRFSMPAFASLNLDPLNRFTEPALSL CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEE DITPRSGPIVIQVDYEIGDDDLAEFMQLMGERRRIRIRDGARNWALMRDLENPGLWTETY EECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCC HTPTWVEYIRHNQRRTQADAENTDRLRALHRGEGPLHVHRMIERQAIPSGDDVFHKAPID CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEECCCC LHH CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA