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The map label for this gene is rimP [H]

Identifier: 209551641

GI number: 209551641

Start: 4246449

End: 4247054

Strand: Reverse

Name: rimP [H]

Synonym: Rleg2_4070

Alternate gene names: 209551641

Gene position: 4247054-4246449 (Counterclockwise)

Preceding gene: 209551644

Following gene: 209551640

Centisome position: 93.59

GC content: 58.25

Gene sequence:

>606_bases
TTGTCGGACATGACAAACGCAGGCAACGAACTTGAGCCGCGGCTGATTACCGAAACCGGGCTCGACCAGCGTCTTGCCGA
TATCATCGAACCCGTCCTCATCGGCATCGGCTTCCGGCTTATCCGCGTCCGTATGCTGAACCAGAACGGCGTGACGATGC
AGGTAATGGCCGAACGCAACGACGGGACGATGACCGTTCAGGATTGCGAAGAAGTCTCGATGGCGATTTCTCCTGTCCTC
GATGTGGAAGATCCGGTCGATAAAGAGTATCATCTCGAAGTGTCTTCGCCCGGCATCGACCGTCCGATGGTGCGGAAATC
CGATTTCGTCCGCTGGCAGGGCCACCTTGTGAAATGCGAGACGTCGATCTTGATCGACAATCGCAAGCGCTTCCGCGGCA
AGATCGTCGAAGCAGGCGTCGATGGTTTCACGCTCGAGCGTGACCAGGTCGCTTACGGGGAAGAGCAGAAGGTCACCATT
CCCTTCACGGCGCTTAGCGATGCGAAGCTCATTCTGACCGACGACCTGATCCGCGACGCGTTGCGCGCCGACAAGCTGGC
GAAAGCCGAGGCCGCCAACCAGAACGAAGCGGACGACCAGGAATAA

Upstream 100 bases:

>100_bases
CTCAAATTCTTGATCGCTTGATGAAGAGTGGGCCGCAAGGACCCGCTCTTTTTTATTAGCGCGATCCCTAAAAAGCATGA
AATTGCGAGGAGCGCACCGC

Downstream 100 bases:

>100_bases
CCGATCAACAGACCGCTACAGGGACGGGAACCCTGGAGTAAAGACGGAGAAACAAGACAATGGCAGTCAGTGCGAACCGG
CTCGAACTTCTGCAGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERNDGTMTVQDCEEVSMAISPVL
DVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNRKRFRGKIVEAGVDGFTLERDQVAYGEEQKVTI
PFTALSDAKLILTDDLIRDALRADKLAKAEAANQNEADDQE

Sequences:

>Translated_201_residues
MSDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERNDGTMTVQDCEEVSMAISPVL
DVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNRKRFRGKIVEAGVDGFTLERDQVAYGEEQKVTI
PFTALSDAKLILTDDLIRDALRADKLAKAEAANQNEADDQE
>Mature_200_residues
SDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERNDGTMTVQDCEEVSMAISPVLD
VEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCETSILIDNRKRFRGKIVEAGVDGFTLERDQVAYGEEQKVTIP
FTALSDAKLILTDDLIRDALRADKLAKAEAANQNEADDQE

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=122, Percent_Identity=36.0655737704918, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 22531; Mature: 22400

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERN
CCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCEEEEEEECC
DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE
CCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEE
TSILIDNRKRFRGKIVEAGVDGFTLERDQVAYGEEQKVTIPFTALSDAKLILTDDLIRDA
EEEEECCCHHHHCEEEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHH
LRADKLAKAEAANQNEADDQE
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDMTNAGNELEPRLITETGLDQRLADIIEPVLIGIGFRLIRVRMLNQNGVTMQVMAERN
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCEEEEEEECC
DGTMTVQDCEEVSMAISPVLDVEDPVDKEYHLEVSSPGIDRPMVRKSDFVRWQGHLVKCE
CCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEE
TSILIDNRKRFRGKIVEAGVDGFTLERDQVAYGEEQKVTIPFTALSDAKLILTDDLIRDA
EEEEECCCHHHHCEEEECCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEHHHHHHH
LRADKLAKAEAANQNEADDQE
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA