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The map label for this gene is ydiK [C]

Identifier: 209551614

GI number: 209551614

Start: 4217813

End: 4218970

Strand: Direct

Name: ydiK [C]

Synonym: Rleg2_4043

Alternate gene names: 209551614

Gene position: 4217813-4218970 (Clockwise)

Preceding gene: 209551613

Following gene: 209551618

Centisome position: 92.95

GC content: 60.1

Gene sequence:

>1158_bases
ATGGCGGAGAACACAGGCGATACGGCAGCGCAGGGAGCCGGGTCAGGGCAGATTTCAGTAGAGGCGAGAATAAGCGATCT
TGTCCGGTTGGGCATCATCGGGCTTTTCGCCTATTGGACGATCGTCTTGATTGCTCCCTTCGCGCTGATCGTTATTTGGT
CGGCCATTCTGGCGGTGGCGCTATTCCCGATATTCCAAGCGCTCTGCAGGCTGCTTGGAAACAGGCCCGTCATCGCAGCC
AGTATCATCGTCGTCTTTTGCCTCGTCCTGATCATTGCGCCCCTGGCTCTGGTCGCGGTCAATTTTGCCGACACCGCGCA
GGCATTGATCGGCAAGTTGCGGGTGGGGGAATTCACGCTCCCCTCGGCGCCGGCCGCCATTCGGGAGTGGCCCGTTGTCG
GCGAGCGGCTCCATGACGCGTGGAATCAGATTGCAAGCGATCTGGCCGCAACGATTATCAAGTTTCAGGCGCCCATTCGT
GAAGTGACGGCCGTTATCGTCACAAAGCTTGCCTCGATCGGCGGCGGCGTGTTGAGCTTTGTCGTTTCGATCATGCTTTC
GGGAATATTTCTCACGCGGTCAGCACGCCTGGCGGCGGCCATACAAGTGCTGGCAAACCGGATCGCCGGTGAAAAGGGTG
TCGGCTTTGCCCGGCTGGCGGGAGCCACGGTGCGCAATGTATCGCGGGGTGTCATCGGCGTTGCCTTCCTGCAGACATTG
CTCTGCGGATTGTGCTTTGCTTTCTTTGGCGTCCCGGCGCGTGGGGCGCTGACATTCGTGATCTTCATGTTTTGCCTGAT
GCAGCTGGGGCCTGGGCTCGTGCTTCTTCCCGTTATCATCTGGTCGTGGTTTTCGTGGTCGCCCGCCGCTGCTTTTGCCT
TTACCGCCATTACCGTGCCCATCATGCTCATCGACAACATATTGAAGCCCGTGCTGATGGCGCGGGGGCTCTCGACCCCG
ATGCCGGTCATCCTGATCGGAGTCATCGGCGGCACACTTTCCCACGGGCTGCTGGGCTTATTTCTGGGGCCGGTCGTGCT
CAGCGTCTTCTACGAGCTGCTGAAAGCCTGGGCCTGGCCCTCAGTCCAGACCGCGTCGGAAAACAGCGGCCCAGCCAAGC
TCGATGCTCTGCCGGAACGCATCGAGCACAGGCAATGA

Upstream 100 bases:

>100_bases
ATCTCGGCAAACGTCAGAAGCGGCCGGCGGATTTCGTGGAGGACCTCAGCGTCCGCCATGTTGTGCCCGACGCGACGTCA
TAACACGGCTTTAGCCGAAC

Downstream 100 bases:

>100_bases
CGGTCTGCCGATAGGTCGCAGTGAGCGTTTTCGGGGTCACCGGTTCTTGCAGTAGACGACAACCTCCTGCTCGATTTCGC
GGCAGAGCTGTTCATACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAENTGDTAAQGAGSGQISVEARISDLVRLGIIGLFAYWTIVLIAPFALIVIWSAILAVALFPIFQALCRLLGNRPVIAA
SIIVVFCLVLIIAPLALVAVNFADTAQALIGKLRVGEFTLPSAPAAIREWPVVGERLHDAWNQIASDLAATIIKFQAPIR
EVTAVIVTKLASIGGGVLSFVVSIMLSGIFLTRSARLAAAIQVLANRIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTL
LCGLCFAFFGVPARGALTFVIFMFCLMQLGPGLVLLPVIIWSWFSWSPAAAFAFTAITVPIMLIDNILKPVLMARGLSTP
MPVILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAWAWPSVQTASENSGPAKLDALPERIEHRQ

Sequences:

>Translated_385_residues
MAENTGDTAAQGAGSGQISVEARISDLVRLGIIGLFAYWTIVLIAPFALIVIWSAILAVALFPIFQALCRLLGNRPVIAA
SIIVVFCLVLIIAPLALVAVNFADTAQALIGKLRVGEFTLPSAPAAIREWPVVGERLHDAWNQIASDLAATIIKFQAPIR
EVTAVIVTKLASIGGGVLSFVVSIMLSGIFLTRSARLAAAIQVLANRIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTL
LCGLCFAFFGVPARGALTFVIFMFCLMQLGPGLVLLPVIIWSWFSWSPAAAFAFTAITVPIMLIDNILKPVLMARGLSTP
MPVILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAWAWPSVQTASENSGPAKLDALPERIEHRQ
>Mature_384_residues
AENTGDTAAQGAGSGQISVEARISDLVRLGIIGLFAYWTIVLIAPFALIVIWSAILAVALFPIFQALCRLLGNRPVIAAS
IIVVFCLVLIIAPLALVAVNFADTAQALIGKLRVGEFTLPSAPAAIREWPVVGERLHDAWNQIASDLAATIIKFQAPIRE
VTAVIVTKLASIGGGVLSFVVSIMLSGIFLTRSARLAAAIQVLANRIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTLL
CGLCFAFFGVPARGALTFVIFMFCLMQLGPGLVLLPVIIWSWFSWSPAAAFAFTAITVPIMLIDNILKPVLMARGLSTPM
PVILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAWAWPSVQTASENSGPAKLDALPERIEHRQ

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=317, Percent_Identity=30.9148264984227, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40757; Mature: 40626

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AENTGDTAAQGAGSGQISVEARISDLVRLGIIGLFAYWTIVLIAPFALIVIWSAILAVA
CCCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPIFQALCRLLGNRPVIAASIIVVFCLVLIIAPLALVAVNFADTAQALIGKLRVGEFTL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PSAPAAIREWPVVGERLHDAWNQIASDLAATIIKFQAPIREVTAVIVTKLASIGGGVLSF
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VVSIMLSGIFLTRSARLAAAIQVLANRIAGEKGVGFARLAGATVRNVSRGVIGVAFLQTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LCGLCFAFFGVPARGALTFVIFMFCLMQLGPGLVLLPVIIWSWFSWSPAAAFAFTAITVP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IMLIDNILKPVLMARGLSTPMPVILIGVIGGTLSHGLLGLFLGPVVLSVFYELLKAWAWP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SVQTASENSGPAKLDALPERIEHRQ
CCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]