| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is yesP [H]
Identifier: 209551587
GI number: 209551587
Start: 4186463
End: 4187422
Strand: Direct
Name: yesP [H]
Synonym: Rleg2_4016
Alternate gene names: 209551587
Gene position: 4186463-4187422 (Clockwise)
Preceding gene: 209551586
Following gene: 209551588
Centisome position: 92.25
GC content: 59.58
Gene sequence:
>960_bases ATGAGCAATGCGATGCGCACGCCCGCAGGGGCTATATCAGTGGAACGATATCAGGGGGCCGTGGCCGAGGGACGCTTCCG GCGTCTCTGGAACGCCAATGCTCCCGGCTATCTCTTCCTCCTGCCATGGCTTATCGGCTTTTTCGGGCTGACGCTGGGGC CGGCCCTGATTTCGCTCTACCTCTCCTTCACCGACTTCGACATGCTGCAGTCGCCGCGGTGGGTGGGTATTTCGAATTAC GTGCGCATCGCCACGGCGGATCCGAAATTTTCGGCCGCCATGCACGTCACCCTGACTTATGTTGTCTTCTCGGTGCCGTT CAAACTGACCTTCGCCTTGCTGGTTGCCATGGCGCTGAATCGTGGCCTGCGCGGGCTGACCTTCTATCGCGCCATCTTCT ACCTCCCTTCGTTGCTGGGTGGCAGCGTGGCGATCGCCGTGCTCTGGCGCCAGCTTTTCGCCAGCGATGGTCTCGTCAAT GCCGCGCTCTCGCAGTTCGGCATAGAAGGTCCGAGCTGGATCTCGCATCCGAACTATTCGATCTACACGCTGGTGGCGCT GTCGGTCTGGCAGTTCGGCTCGCCGATGATCATCTTTCTCGCCGGTCTGCGCCAGATCCCGCAGGATATGTATGAAGCGG CAAGCCTCGACGGGGCCTCGAAATTCCGCCAGTTCTACAAAATCACCCTGCCGCTGCTGACCCCGGTCATCTTCTTCAAC GCCGTGGTCCAGACAATCGACGCCTTCAAGGCATTTACCCCGGCCTTCATCATATCAGGCGGTACCGGCGGCCCGATCAA CTCGACGCTGTTCTACACGCTCTACCTCTATCAGGAAGCCTTCGGCAATTTCCGCATGGGTTATGCCTCGGCGCTCGCCT GGATCCTGGTCGTGATCATCGCGATCTTCACGGCCTTTTCCTTCCTGACCTCGCGCTATTGGGTGCACTACGATGACTGA
Upstream 100 bases:
>100_bases CATCGCCGAACAGGTCGGCTTCGGCCAGCTGTCTCCTTCCGATGGCGGCAAACAGCTTGTCACCGAAATCACGCAGATTC TCGCACGAGGCTGATCCCGT
Downstream 100 bases:
>100_bases GATGACCGCTTCCGTCACTGCGGCCAGGCCGCCATCGGACATCACCAAACGCAGCCTGCCGGCGTCGCTTGTCATCCACG CACTATTGATCGCCGCATCG
Product: binding-protein-dependent transporters inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSNAMRTPAGAISVERYQGAVAEGRFRRLWNANAPGYLFLLPWLIGFFGLTLGPALISLYLSFTDFDMLQSPRWVGISNY VRIATADPKFSAAMHVTLTYVVFSVPFKLTFALLVAMALNRGLRGLTFYRAIFYLPSLLGGSVAIAVLWRQLFASDGLVN AALSQFGIEGPSWISHPNYSIYTLVALSVWQFGSPMIIFLAGLRQIPQDMYEAASLDGASKFRQFYKITLPLLTPVIFFN AVVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVVIIAIFTAFSFLTSRYWVHYDD
Sequences:
>Translated_319_residues MSNAMRTPAGAISVERYQGAVAEGRFRRLWNANAPGYLFLLPWLIGFFGLTLGPALISLYLSFTDFDMLQSPRWVGISNY VRIATADPKFSAAMHVTLTYVVFSVPFKLTFALLVAMALNRGLRGLTFYRAIFYLPSLLGGSVAIAVLWRQLFASDGLVN AALSQFGIEGPSWISHPNYSIYTLVALSVWQFGSPMIIFLAGLRQIPQDMYEAASLDGASKFRQFYKITLPLLTPVIFFN AVVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVVIIAIFTAFSFLTSRYWVHYDD >Mature_318_residues SNAMRTPAGAISVERYQGAVAEGRFRRLWNANAPGYLFLLPWLIGFFGLTLGPALISLYLSFTDFDMLQSPRWVGISNYV RIATADPKFSAAMHVTLTYVVFSVPFKLTFALLVAMALNRGLRGLTFYRAIFYLPSLLGGSVAIAVLWRQLFASDGLVNA ALSQFGIEGPSWISHPNYSIYTLVALSVWQFGSPMIIFLAGLRQIPQDMYEAASLDGASKFRQFYKITLPLLTPVIFFNA VVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVVIIAIFTAFSFLTSRYWVHYDD
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787570, Length=231, Percent_Identity=31.1688311688312, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=29.9651567944251, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790465, Length=258, Percent_Identity=29.8449612403101, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35489; Mature: 35358
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAMRTPAGAISVERYQGAVAEGRFRRLWNANAPGYLFLLPWLIGFFGLTLGPALISLY CCCCCCCCCCCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSFTDFDMLQSPRWVGISNYVRIATADPKFSAAMHVTLTYVVFSVPFKLTFALLVAMALN HHHHHHHHHCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLRGLTFYRAIFYLPSLLGGSVAIAVLWRQLFASDGLVNAALSQFGIEGPSWISHPNYS CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCH IYTLVALSVWQFGSPMIIFLAGLRQIPQDMYEAASLDGASKFRQFYKITLPLLTPVIFFN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AVVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVVII HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AIFTAFSFLTSRYWVHYDD HHHHHHHHHHHCCCEEECC >Mature Secondary Structure SNAMRTPAGAISVERYQGAVAEGRFRRLWNANAPGYLFLLPWLIGFFGLTLGPALISLY CCCCCCCCCCEEHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LSFTDFDMLQSPRWVGISNYVRIATADPKFSAAMHVTLTYVVFSVPFKLTFALLVAMALN HHHHHHHHHCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGLRGLTFYRAIFYLPSLLGGSVAIAVLWRQLFASDGLVNAALSQFGIEGPSWISHPNYS CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCH IYTLVALSVWQFGSPMIIFLAGLRQIPQDMYEAASLDGASKFRQFYKITLPLLTPVIFFN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH AVVQTIDAFKAFTPAFIISGGTGGPINSTLFYTLYLYQEAFGNFRMGYASALAWILVVII HHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AIFTAFSFLTSRYWVHYDD HHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]