| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is narP [C]
Identifier: 209551570
GI number: 209551570
Start: 4166767
End: 4167549
Strand: Direct
Name: narP [C]
Synonym: Rleg2_3999
Alternate gene names: 209551570
Gene position: 4166767-4167549 (Clockwise)
Preceding gene: 209551559
Following gene: 209551572
Centisome position: 91.82
GC content: 55.17
Gene sequence:
>783_bases ATGTTCATGACAGGCTCAGAGACGGAGAATTCTGACCAGGGACGGAAGTTGGAGTCATCGAGAAATACTATACTGGTGGT CGCCAAGGCGGATCTGTTTTCTGAATGCATGGTAGAAGCGCTGGCGAAGAAATTTCCGAACTGTGAGGTGTCAAGCATAA CGAGCACAAAGCCGATGCTGGACAAGGATGCCAACGATATAAAGCTTGTTTTATTCTATCACATACCTGCGCCCGAGCTT CATGAAGCGCTGCAGGCCGCCCGCGAAAATCACCCGGAAACATCCGTCGGACTCGTCGTCGAAGCGATCGACATGCTCGA ACCCTATGTCAGCCGCCTGGTGGAGGCAAGGATCATCGATGGCGTCCTGCCGCTCAACCTGCGGCTCGATGTCTTCATGG CCGCGGTCGATCTGCTGATGAAGGGTGGCGAACATTTTCCGTCAGCCCTTCTCAATCGCCTCACCAACAAGAACACCCCG CTCGAGCCTTCGCTCTATCAGACAAAATCGGTCGATGCGGCGCGCACCAATGCGCTGAAGCTGAGACGCGACAGCATCTC CTCCTTGACCACGCGCGAGGTTCAGATCCTGGACCTCATATGCAAGGGCACGCAAAACAAGATCATCGCCGACAAGCTGC ATCTTTCGGAAAACACCGTGAAGGTTCACGTCCGCAACATCTACAAGAAGATGAACGTCCGAAACCGCACGGAAGCTGCA TCCCGTTTCTTCAACGAGCATCCCGCCGGCGAGGACGACATGTCCGGCCGCTGGCGCAACTGA
Upstream 100 bases:
>100_bases TAAAAAATAAGGCGGTGACATCCGGGGCCGGCATTTCATACTATTGAATACCCGCCATCGCTCCACGTTTGAGTAAAGTG TAACGCTAGGGGAGGCGTAT
Downstream 100 bases:
>100_bases TCCAGAGCAAGTCCGGCAAAATTGCCTAGCGGATTTGCCAGGCAAAGCACAAAGCGCATTTGCCGGGAATGGCGTGAAAA CAAGAAGATTGAGCATCTTC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator Protein LuxR Family; Response Regulator Receiver Protein; GerE Family Transcriptional Regulator; Transcriptional Regulator LuxR Family; Two Component Transcriptional Regulator LuxR Family; Transcriptional Regulator LuxR Family Protein; LuxR Family Transcriptional Regulator; Transcriptional Regulator; Transcription Regulator Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MFMTGSETENSDQGRKLESSRNTILVVAKADLFSECMVEALAKKFPNCEVSSITSTKPMLDKDANDIKLVLFYHIPAPEL HEALQAARENHPETSVGLVVEAIDMLEPYVSRLVEARIIDGVLPLNLRLDVFMAAVDLLMKGGEHFPSALLNRLTNKNTP LEPSLYQTKSVDAARTNALKLRRDSISSLTTREVQILDLICKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAA SRFFNEHPAGEDDMSGRWRN
Sequences:
>Translated_260_residues MFMTGSETENSDQGRKLESSRNTILVVAKADLFSECMVEALAKKFPNCEVSSITSTKPMLDKDANDIKLVLFYHIPAPEL HEALQAARENHPETSVGLVVEAIDMLEPYVSRLVEARIIDGVLPLNLRLDVFMAAVDLLMKGGEHFPSALLNRLTNKNTP LEPSLYQTKSVDAARTNALKLRRDSISSLTTREVQILDLICKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAA SRFFNEHPAGEDDMSGRWRN >Mature_260_residues MFMTGSETENSDQGRKLESSRNTILVVAKADLFSECMVEALAKKFPNCEVSSITSTKPMLDKDANDIKLVLFYHIPAPEL HEALQAARENHPETSVGLVVEAIDMLEPYVSRLVEARIIDGVLPLNLRLDVFMAAVDLLMKGGEHFPSALLNRLTNKNTP LEPSLYQTKSVDAARTNALKLRRDSISSLTTREVQILDLICKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAA SRFFNEHPAGEDDMSGRWRN
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788521, Length=66, Percent_Identity=45.4545454545455, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29203; Mature: 29203
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2 ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMTGSETENSDQGRKLESSRNTILVVAKADLFSECMVEALAKKFPNCEVSSITSTKPML CCCCCCCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DKDANDIKLVLFYHIPAPELHEALQAARENHPETSVGLVVEAIDMLEPYVSRLVEARIID CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVLPLNLRLDVFMAAVDLLMKGGEHFPSALLNRLTNKNTPLEPSLYQTKSVDAARTNALK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHH LRRDSISSLTTREVQILDLICKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHH SRFFNEHPAGEDDMSGRWRN HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFMTGSETENSDQGRKLESSRNTILVVAKADLFSECMVEALAKKFPNCEVSSITSTKPML CCCCCCCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DKDANDIKLVLFYHIPAPELHEALQAARENHPETSVGLVVEAIDMLEPYVSRLVEARIID CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GVLPLNLRLDVFMAAVDLLMKGGEHFPSALLNRLTNKNTPLEPSLYQTKSVDAARTNALK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHH LRRDSISSLTTREVQILDLICKGTQNKIIADKLHLSENTVKVHVRNIYKKMNVRNRTEAA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHH SRFFNEHPAGEDDMSGRWRN HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA