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The map label for this gene is regB [H]

Identifier: 209551561

GI number: 209551561

Start: 4142174

End: 4143502

Strand: Reverse

Name: regB [H]

Synonym: Rleg2_3990

Alternate gene names: 209551561

Gene position: 4143502-4142174 (Counterclockwise)

Preceding gene: 209551562

Following gene: 209551560

Centisome position: 91.31

GC content: 61.7

Gene sequence:

>1329_bases
ATGATCGACACGCCTGGCACGATTGACAAGACGCAAAGCCTTGCACTGGAGGACCGATACAGCAGCCGCAGGCTGCGCCT
GCAGACGCTGGTGCGGCTGCGCTGGCTTGCCGTCTGCGGACAAGCGCTGACGGTGTTCATCGTGGCCTTCTGGCTGAAAT
TTTCCTTGCCGCTGATTGCCAGCTCTTCGCTGATCGCCGCCCTTGCCTGGGTGAATTTCTACCTGACGATCCGCTATCCG
CCGACCCACCGGCTGGGACCGCCGGCCGCCTTTGCGCTGCTCGGCTTCGATCTTCTGCAGCTGTGCGCGCTGCTCTTCAT
CACCGGCGGCCTCGCCAATCCTTTCGCAGCCCTCGTCTGCGTGCCTGTTATCATCTCGTTTGCCTCGCAGCCGATCCGTT
ACAGCACGGCGCTGATCGGCTTCGCGATGGTGTGCATCACGGTGCTTGCCTTTTCGCCTTTTCCGCTGCCGTGGTTCGAC
GGTGTCGAGATCAACGTCCATAACGTCATGCAGTTCGGCGTCTGGTGTTCGATCGCCTCGACGATGGCCTTCGCCGCCTT
CTATGCCTACCGTGTCTCGCTGGAAGCGAGCCAGCTTGCCGATGCGCTGGCTGCGACCGAACTGGTGCTGCAGCGGGAAA
AGCATCTTTCCCAGCTCGACGGACTGGCGGCGGCCGCTGCCCACGAACTCGGCACGCCGCTTGCCACGATCAGCGTCGTC
GCCAAGGAAATGGAGCGGGAACTCAAGGATGACGATCGTTTCCGCGAGGACGTGATGCTGCTGCGCAGCCAGAGCGAGCG
CTGCCGTGACATCCTGCGGCGGCTGACGACACTGTCCTCGGAAGGCGAAGCGCATATGCGACGGCTGCCGCTTTCCTCGA
TGATCGAAGAGATCGTCGCGCCCCACCGGGAATTCGGCATTGCGCTGGAGCTGATCGAAAAGAGCCCGCGCAAGGACGAG
CCGGTGACCGACCGCAACGCCGGCATCATGTACGGGCTCGGCAATCTGATCGAAAACGCCGTCGATTATGCCCGGGAGAA
AGTGAGGATCACTGTCGAGCATGATCACGATAAAGTGCTGATCATCATCGAGGACGACGGCAACGGTTACGCCCCCGATA
TTCTGACACGGATCGGCGAGCCTTACATGACCAAACGGCAGAAAGAGGATACGGCGGGCGGCCTTGGGCTCGGGCTTTTC
ATCGCCAAGACGCTGCTGGAGCGCTCGGGCGCATCGCTGATTTTCGAGAATCGCGACCCGGAAAGTGCGGGCGCGCGCAT
CCGGATCGAATGGCCGCGCATGCTGATCGACGCAAATTCGACAAAGTGA

Upstream 100 bases:

>100_bases
GTTATCCCCGGCATCCCTGGCCGGAGCGGCCGGAAGAGGCGTTGCCGACGACACGGGCAAAACCGCGTGGTACATGAGCG
CCATCCAAGGAGACCCTGGC

Downstream 100 bases:

>100_bases
CTTTGTCGGCATAAGTAGGATATAAGCGGTTGACGCAGATCGGGCGTTCAAGCGCCAGGGCCAAGACGATGACAGAACAA
ACTCACGAAAATTTCGCCGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIDTPGTIDKTQSLALEDRYSSRRLRLQTLVRLRWLAVCGQALTVFIVAFWLKFSLPLIASSSLIAALAWVNFYLTIRYP
PTHRLGPPAAFALLGFDLLQLCALLFITGGLANPFAALVCVPVIISFASQPIRYSTALIGFAMVCITVLAFSPFPLPWFD
GVEINVHNVMQFGVWCSIASTMAFAAFYAYRVSLEASQLADALAATELVLQREKHLSQLDGLAAAAAHELGTPLATISVV
AKEMERELKDDDRFREDVMLLRSQSERCRDILRRLTTLSSEGEAHMRRLPLSSMIEEIVAPHREFGIALELIEKSPRKDE
PVTDRNAGIMYGLGNLIENAVDYAREKVRITVEHDHDKVLIIIEDDGNGYAPDILTRIGEPYMTKRQKEDTAGGLGLGLF
IAKTLLERSGASLIFENRDPESAGARIRIEWPRMLIDANSTK

Sequences:

>Translated_442_residues
MIDTPGTIDKTQSLALEDRYSSRRLRLQTLVRLRWLAVCGQALTVFIVAFWLKFSLPLIASSSLIAALAWVNFYLTIRYP
PTHRLGPPAAFALLGFDLLQLCALLFITGGLANPFAALVCVPVIISFASQPIRYSTALIGFAMVCITVLAFSPFPLPWFD
GVEINVHNVMQFGVWCSIASTMAFAAFYAYRVSLEASQLADALAATELVLQREKHLSQLDGLAAAAAHELGTPLATISVV
AKEMERELKDDDRFREDVMLLRSQSERCRDILRRLTTLSSEGEAHMRRLPLSSMIEEIVAPHREFGIALELIEKSPRKDE
PVTDRNAGIMYGLGNLIENAVDYAREKVRITVEHDHDKVLIIIEDDGNGYAPDILTRIGEPYMTKRQKEDTAGGLGLGLF
IAKTLLERSGASLIFENRDPESAGARIRIEWPRMLIDANSTK
>Mature_442_residues
MIDTPGTIDKTQSLALEDRYSSRRLRLQTLVRLRWLAVCGQALTVFIVAFWLKFSLPLIASSSLIAALAWVNFYLTIRYP
PTHRLGPPAAFALLGFDLLQLCALLFITGGLANPFAALVCVPVIISFASQPIRYSTALIGFAMVCITVLAFSPFPLPWFD
GVEINVHNVMQFGVWCSIASTMAFAAFYAYRVSLEASQLADALAATELVLQREKHLSQLDGLAAAAAHELGTPLATISVV
AKEMERELKDDDRFREDVMLLRSQSERCRDILRRLTTLSSEGEAHMRRLPLSSMIEEIVAPHREFGIALELIEKSPRKDE
PVTDRNAGIMYGLGNLIENAVDYAREKVRITVEHDHDKVLIIIEDDGNGYAPDILTRIGEPYMTKRQKEDTAGGLGLGLF
IAKTLLERSGASLIFENRDPESAGARIRIEWPRMLIDANSTK

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49121; Mature: 49121

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTPGTIDKTQSLALEDRYSSRRLRLQTLVRLRWLAVCGQALTVFIVAFWLKFSLPLIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SSSLIAALAWVNFYLTIRYPPTHRLGPPAAFALLGFDLLQLCALLFITGGLANPFAALVC
HHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VPVIISFASQPIRYSTALIGFAMVCITVLAFSPFPLPWFDGVEINVHNVMQFGVWCSIAS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
TMAFAAFYAYRVSLEASQLADALAATELVLQREKHLSQLDGLAAAAAHELGTPLATISVV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AKEMERELKDDDRFREDVMLLRSQSERCRDILRRLTTLSSEGEAHMRRLPLSSMIEEIVA
HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHC
PHREFGIALELIEKSPRKDEPVTDRNAGIMYGLGNLIENAVDYAREKVRITVEHDHDKVL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEE
IIIEDDGNGYAPDILTRIGEPYMTKRQKEDTAGGLGLGLFIAKTLLERSGASLIFENRDP
EEEECCCCCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
ESAGARIRIEWPRMLIDANSTK
CCCCCEEEEECCEEEEECCCCC
>Mature Secondary Structure
MIDTPGTIDKTQSLALEDRYSSRRLRLQTLVRLRWLAVCGQALTVFIVAFWLKFSLPLIA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SSSLIAALAWVNFYLTIRYPPTHRLGPPAAFALLGFDLLQLCALLFITGGLANPFAALVC
HHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VPVIISFASQPIRYSTALIGFAMVCITVLAFSPFPLPWFDGVEINVHNVMQFGVWCSIAS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH
TMAFAAFYAYRVSLEASQLADALAATELVLQREKHLSQLDGLAAAAAHELGTPLATISVV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
AKEMERELKDDDRFREDVMLLRSQSERCRDILRRLTTLSSEGEAHMRRLPLSSMIEEIVA
HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHC
PHREFGIALELIEKSPRKDEPVTDRNAGIMYGLGNLIENAVDYAREKVRITVEHDHDKVL
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEE
IIIEDDGNGYAPDILTRIGEPYMTKRQKEDTAGGLGLGLFIAKTLLERSGASLIFENRDP
EEEECCCCCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCC
ESAGARIRIEWPRMLIDANSTK
CCCCCEEEEECCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]