| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yjeE [H]
Identifier: 209551533
GI number: 209551533
Start: 4114702
End: 4116213
Strand: Reverse
Name: yjeE [H]
Synonym: Rleg2_3962
Alternate gene names: 209551533
Gene position: 4116213-4114702 (Counterclockwise)
Preceding gene: 209551534
Following gene: 209551532
Centisome position: 90.71
GC content: 61.38
Gene sequence:
>1512_bases ATGACGACCGGCGATACGATCTCGCTTTTCCTGAAGGACGAAGCCGCGACCATCCGCTTCGGCGAAGACCTGGCGCTCGC CCTGAAAGCCGGCGATTGTCTCGCCCTTTCCGGCGATCTCGGCGCCGGCAAATCCTCGCTCGCCCGGGCGATCCTGCGCG CCATGGCCGATGACGAGGGGCTCGAAGTCCCAAGCCCGACCTTCACGCTGGTGCAATCCTACGATCTGCGCATCCCGGTT TCGCACTTCGATCTCTATCGGCTCGGCGATCCGGCCGAACTGACGGAACTCGGCTTCGACGAAGCCCTGGAGAACGGCAT CTGTCTCGTCGAATGGCCCGAGATGGCTGAGGGCGAACTGCCGGCCGATCGTATCGCACTGAGGCTGGACCATGAAGACA GCGGCCGCCGGGCAACGATCAAAGCCGCAGAGCCGCAGGCCTCACGCATCCGCAGGGTCCTGGCGATCCGCGCCTTCCTC GACGAAGCCGGCTATCCCGATGTCAAACGCCGCTTCCTGACCGGCGATGCTTCGCTGCGCGCCTATGAAGCGATCTATCC GGACGGTGGGCCGCGAAAAATACTGATGGATTGGCGCCCGCATCCCGAGGGACCGCCGGTCTATGACGGCAAGCCCTATC CCAAGGTCGCGCATCTGGCACAAAACGCCTATCCTTTCGTTGCGATTGCCGATGCCTTGCGCGAGCGGGGTTTTGCGACG CCGGAGATTTATAAGGTCGATTATGAGCAGGGCATCCTGCTGATCGAGGATCTCGGCACCGAAGGCGTGCTCGATGACGA CGGGAGGCCGATCGCCGAACGTTACCGGCAAAGCGTCGCCTGTCTTGCCCATCTTCATTCCATGCAGATCCCGCAGGATA TCCCGGTTTCCCAGACGCACACGCATCACATTCCCGACTTCGACCGCACGGCAATGAAGATGGAAGTGCAGCTTGTGCTC GATTGGCATATTGCCTGGAAGCGCGGCACACCTCCCACCGATACCGAACGGGCGGAGTATCTGGCGATCTGGGACGCGCT TATCGACGAGCTCGCGACAGCTGAGAAGAACCTGCTGCTGCGCGACTTCCATTCGCCTAATATCATCTGGCGCGACGAGA AAAGCGGTGTTGGCAAAATCGGCATCATCGACTTCCAGGATGCGATGATCGGCCCGACGGCCTATGACCTTGCTTCCATC GTCCAGGATGCGCGCGTGACGATCGAACCGGCGCTCTTCCGGCAGCTAATGGATGATTATCTCGCTCGTCGCCGCGCCCA GGACGGCTTTGACGAAGCCGAATTCATGAAGGCCTGGGCGATCATGTCGGCGCAGCGCAATTGCAAGCTTGCCGGTCTCT GGGTGCGGCTGTTGCAGCGCGACGGGAAGCCTGGCTACCTCAAACATATGCCGCGAACGCTCGCCTATCTCCAGGTCGCG TTCGAGCACGAAGCGCTTGCCCCCTTGCGCGATTGGTGCGCAAGGGCTGGAATAGGCCAAAGCGAATCATAA
Upstream 100 bases:
>100_bases TGCATCATGGCGACGTGACGATCGACAGCGAGCCGGGCAAGGGCACGACCGTCGTCTGCCGCATTCCCTCGGTCGATATC CCGCATTCCGCTGCCGCCGA
Downstream 100 bases:
>100_bases GTTCCGGATCAGGATGACCATCAGACAAGCAATGGTACTGGCCGCGGGTCTTGGGACCCGTATGCGCCCGATCACCGACA CGATCCCGAAGCCGCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MTTGDTISLFLKDEAATIRFGEDLALALKAGDCLALSGDLGAGKSSLARAILRAMADDEGLEVPSPTFTLVQSYDLRIPV SHFDLYRLGDPAELTELGFDEALENGICLVEWPEMAEGELPADRIALRLDHEDSGRRATIKAAEPQASRIRRVLAIRAFL DEAGYPDVKRRFLTGDASLRAYEAIYPDGGPRKILMDWRPHPEGPPVYDGKPYPKVAHLAQNAYPFVAIADALRERGFAT PEIYKVDYEQGILLIEDLGTEGVLDDDGRPIAERYRQSVACLAHLHSMQIPQDIPVSQTHTHHIPDFDRTAMKMEVQLVL DWHIAWKRGTPPTDTERAEYLAIWDALIDELATAEKNLLLRDFHSPNIIWRDEKSGVGKIGIIDFQDAMIGPTAYDLASI VQDARVTIEPALFRQLMDDYLARRRAQDGFDEAEFMKAWAIMSAQRNCKLAGLWVRLLQRDGKPGYLKHMPRTLAYLQVA FEHEALAPLRDWCARAGIGQSES
Sequences:
>Translated_503_residues MTTGDTISLFLKDEAATIRFGEDLALALKAGDCLALSGDLGAGKSSLARAILRAMADDEGLEVPSPTFTLVQSYDLRIPV SHFDLYRLGDPAELTELGFDEALENGICLVEWPEMAEGELPADRIALRLDHEDSGRRATIKAAEPQASRIRRVLAIRAFL DEAGYPDVKRRFLTGDASLRAYEAIYPDGGPRKILMDWRPHPEGPPVYDGKPYPKVAHLAQNAYPFVAIADALRERGFAT PEIYKVDYEQGILLIEDLGTEGVLDDDGRPIAERYRQSVACLAHLHSMQIPQDIPVSQTHTHHIPDFDRTAMKMEVQLVL DWHIAWKRGTPPTDTERAEYLAIWDALIDELATAEKNLLLRDFHSPNIIWRDEKSGVGKIGIIDFQDAMIGPTAYDLASI VQDARVTIEPALFRQLMDDYLARRRAQDGFDEAEFMKAWAIMSAQRNCKLAGLWVRLLQRDGKPGYLKHMPRTLAYLQVA FEHEALAPLRDWCARAGIGQSES >Mature_502_residues TTGDTISLFLKDEAATIRFGEDLALALKAGDCLALSGDLGAGKSSLARAILRAMADDEGLEVPSPTFTLVQSYDLRIPVS HFDLYRLGDPAELTELGFDEALENGICLVEWPEMAEGELPADRIALRLDHEDSGRRATIKAAEPQASRIRRVLAIRAFLD EAGYPDVKRRFLTGDASLRAYEAIYPDGGPRKILMDWRPHPEGPPVYDGKPYPKVAHLAQNAYPFVAIADALRERGFATP EIYKVDYEQGILLIEDLGTEGVLDDDGRPIAERYRQSVACLAHLHSMQIPQDIPVSQTHTHHIPDFDRTAMKMEVQLVLD WHIAWKRGTPPTDTERAEYLAIWDALIDELATAEKNLLLRDFHSPNIIWRDEKSGVGKIGIIDFQDAMIGPTAYDLASIV QDARVTIEPALFRQLMDDYLARRRAQDGFDEAEFMKAWAIMSAQRNCKLAGLWVRLLQRDGKPGYLKHMPRTLAYLQVAF EHEALAPLRDWCARAGIGQSES
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=135, Percent_Identity=42.962962962963, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 56286; Mature: 56154
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGDTISLFLKDEAATIRFGEDLALALKAGDCLALSGDLGAGKSSLARAILRAMADDEG CCCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQSYDLRIPVSHFDLYRLGDPAELTELGFDEALENGICLVEWPEMAEGEL CCCCCCCEEEEECCCCEEEHHHCCCEECCCCHHHHHCCHHHHHHCCEEEEECCCCCCCCC PADRIALRLDHEDSGRRATIKAAEPQASRIRRVLAIRAFLDEAGYPDVKRRFLTGDASLR CCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCE AYEAIYPDGGPRKILMDWRPHPEGPPVYDGKPYPKVAHLAQNAYPFVAIADALRERGFAT EEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCC PEIYKVDYEQGILLIEDLGTEGVLDDDGRPIAERYRQSVACLAHLHSMQIPQDIPVSQTH CCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC THHIPDFDRTAMKMEVQLVLDWHIAWKRGTPPTDTERAEYLAIWDALIDELATAEKNLLL CCCCCCCCCHHHEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE RDFHSPNIIWRDEKSGVGKIGIIDFQDAMIGPTAYDLASIVQDARVTIEPALFRQLMDDY EECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHH LARRRAQDGFDEAEFMKAWAIMSAQRNCKLAGLWVRLLQRDGKPGYLKHMPRTLAYLQVA HHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FEHEALAPLRDWCARAGIGQSES HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTGDTISLFLKDEAATIRFGEDLALALKAGDCLALSGDLGAGKSSLARAILRAMADDEG CCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHCCCCC LEVPSPTFTLVQSYDLRIPVSHFDLYRLGDPAELTELGFDEALENGICLVEWPEMAEGEL CCCCCCCEEEEECCCCEEEHHHCCCEECCCCHHHHHCCHHHHHHCCEEEEECCCCCCCCC PADRIALRLDHEDSGRRATIKAAEPQASRIRRVLAIRAFLDEAGYPDVKRRFLTGDASLR CCCCEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCE AYEAIYPDGGPRKILMDWRPHPEGPPVYDGKPYPKVAHLAQNAYPFVAIADALRERGFAT EEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCC PEIYKVDYEQGILLIEDLGTEGVLDDDGRPIAERYRQSVACLAHLHSMQIPQDIPVSQTH CCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC THHIPDFDRTAMKMEVQLVLDWHIAWKRGTPPTDTERAEYLAIWDALIDELATAEKNLLL CCCCCCCCCHHHEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE RDFHSPNIIWRDEKSGVGKIGIIDFQDAMIGPTAYDLASIVQDARVTIEPALFRQLMDDY EECCCCCEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHH LARRRAQDGFDEAEFMKAWAIMSAQRNCKLAGLWVRLLQRDGKPGYLKHMPRTLAYLQVA HHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FEHEALAPLRDWCARAGIGQSES HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]