| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is mnmG [H]
Identifier: 209551501
GI number: 209551501
Start: 4079465
End: 4081342
Strand: Reverse
Name: mnmG [H]
Synonym: Rleg2_3930
Alternate gene names: 209551501
Gene position: 4081342-4079465 (Counterclockwise)
Preceding gene: 209551502
Following gene: 209551500
Centisome position: 89.94
GC content: 59.96
Gene sequence:
>1878_bases ATGACCGATAAAGTCTATGATGTCATTGTGATCGGTGGTGGCCATGCGGGGTCGGAAGCTGCCAGTGCGGCCGCGCGCCT TGGCGCCAAAACCGCTTTGGTGACACATAGACGCGATACGATCGGGGTGATGTCCTGCAATCCGGCGATCGGCGGTCTCG GCAAGGGCCATTTGGTTCGCGAGATCGACGCGATGGACGGGCTCATGGGTCGCGTCGCCGATGTCGCCGGCATCCAGTTC AGGATGCTGAACAAGAAAAAAGGTGCGGCCGTGCGCGGACCGCGGACCCAGGCCGATCGAAAACTTTATCGTTTGGCGAT GTTGGCGGCGATCGAGGCCACAGCAGGTTTGGATATCGTCGAAGGCGACGCCTTTGATCTGAAAGTCGTCGATGGCCGCG TGGCCGGGGTGATCATGCAGGACGGCCGCGTGCTTGGAGCGGCCGCCGTTGTTCTGACGACCGGGACCTTTCTTCGCGGC CTCATTCATATCGGTTCAGAAAAGACGCCGGCTGGTCGCGTTGGCGAAGCACCGTCGATCGGGCTGTCGGCCACCCTGGC GAGGCTTGGATTGCGGCTGGGACGGTTGAAGACCGGGACGCCGGCGCGGCTGGATGGAAAGACCATCGACTGGCAGGCCG TTGGCCGGCAAGGGGCCGACGAGGAGCTTACCCCCTTCTCGCTGATGACCGATGCAATTACCACTCCGCAGATCGAATGC GGGGTCACCCGGACGACCGAGGCGACACACCGCATCATCGTCGACAACATCATGCGGTCGGCCATGTATTCCGGCCAGAT CGAAGGGGTGGGTCCGCGCTATTGTCCGTCGATCGAAGACAAGCTCGTTAAGTTCGGAGAGCGGGACGGACATCAGGTCT TTCTCGAGCCAGAAGGTCTCGACGATGATACCGTCTATCCAAACGGGATCTCGACATCTCTGCCGGCAGAGGTCCAGGCC GAATTCATTAAGACGATTCCCGGGCTTGAGAGGGCGAGAATCATTCAGCCGGGTTACGCGATCGAATATGATCATGTCGA TCCGAGAGAGCTGACACCCTCGCTCGAGGTCAAACGGCTGAAAGGCCTGTTTCTCGCCGGTCAGATCAATGGCACCACGG GTTACGAGGAAGCGGCCGCCCAAGGCCTGGCCGCCGGAATCAATGCTGCATTGCGAAGCAGCGATTCGGATCCGTTTCAT TTCAGCCGCACAAATTCCTATATCGGCGTGATGATCGATGACTTGACGTCGCGCGGCGTTACGGAACCGTATCGAATGTT TACATCGCGTGCGGAATATCGGCTGATGCTAAGGGCTGACAATGCCGATATGCGGCTGACGCCGTTGGCGATGCAGCTCG GATGTGTGAGCGGCGAACGAGAGCGGCGATTCACACGCTATCAGACAGAGATCGAAGCGGGTCGAGTGCTGCTGCAGTCA CTGGCGGTGACGCCGAACGAAGCGCGGCGCGTCGGTTTGAACATCAATCTCGACGGCCAGCGCCGAACGGCTTATGACCT GCTCTCCTATCCGAATTATGATTTTGATGTCCTTCGGAAGGTGTGGCCTGACGAGCTGGGGGCGGTTGCCGGAAAAGTCG CGGAGGCATTGGAAATCGAAGCGGGCTATTCGGTCTATCTCGACCGGCAGGCCGCGGCGATTGCCGATCAGCAGCGCGAC GAGGACCGGCATATACCGGCTGATTTCGACTATACCGCGCTGTCCGGCCTTTCGAACGAGCTTAAGGCAAAGCTCGGCGC TGCTCGGCCTTTCAACATTGCCCAGGCCGCAATCGTTGAAGGGATGACGCCTGCGGCCGTCGCACTATTGCTCGTGCATC TGCGTCGGCGCAACACCTCCGAGCGATATAGCGCCTAG
Upstream 100 bases:
>100_bases GTGATCTTCTCAGAGTTTTGTATCGGCAAGTGATTCACGTGAAACACCGGGGTATATTGCCGCGGTTTCACCTGAAACGA CGGGTGGGTTGGAGTATCGG
Downstream 100 bases:
>100_bases ATACAAGATATTGAGAGTGAGAATGGAATTAAACGGCTTACGTGTTTCACGTGAAACACAGGAACGGCTGCAACACTTCG CGGCGCTCTTTCAGAAATGG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MTDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADVAGIQF RMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIVEGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRG LIHIGSEKTPAGRVGEAPSIGLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIEC GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGLDDDTVYPNGISTSLPAEVQA EFIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRLKGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFH FSRTNSYIGVMIDDLTSRGVTEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQS LAVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIEAGYSVYLDRQAAAIADQQRD EDRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVEGMTPAAVALLLVHLRRRNTSERYSA
Sequences:
>Translated_625_residues MTDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADVAGIQF RMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIVEGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRG LIHIGSEKTPAGRVGEAPSIGLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIEC GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGLDDDTVYPNGISTSLPAEVQA EFIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRLKGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFH FSRTNSYIGVMIDDLTSRGVTEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQS LAVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIEAGYSVYLDRQAAAIADQQRD EDRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVEGMTPAAVALLLVHLRRRNTSERYSA >Mature_624_residues TDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVREIDAMDGLMGRVADVAGIQFR MLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIVEGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRGL IHIGSEKTPAGRVGEAPSIGLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIECG VTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGLDDDTVYPNGISTSLPAEVQAE FIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRLKGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFHF SRTNSYIGVMIDDLTSRGVTEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQSL AVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIEAGYSVYLDRQAAAIADQQRDE DRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVEGMTPAAVALLLVHLRRRNTSERYSA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=639, Percent_Identity=46.9483568075117, Blast_Score=544, Evalue=1e-155, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=45.1807228915663, Blast_Score=530, Evalue=1e-150, Organism=Homo sapiens, GI183227703, Length=679, Percent_Identity=44.1826215022091, Blast_Score=525, Evalue=1e-149, Organism=Escherichia coli, GI2367273, Length=621, Percent_Identity=51.8518518518518, Blast_Score=619, Evalue=1e-178, Organism=Caenorhabditis elegans, GI17534255, Length=616, Percent_Identity=43.0194805194805, Blast_Score=491, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6321202, Length=634, Percent_Identity=44.4794952681388, Blast_Score=533, Evalue=1e-152, Organism=Drosophila melanogaster, GI24658174, Length=632, Percent_Identity=46.6772151898734, Blast_Score=539, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 67582; Mature: 67451
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVR CCCCEEEEEEEECCCCCCHHHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCCCCCHHHH EIDAMDGLMGRVADVAGIQFRMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIV HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE EGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI ECCCEEEEEECCEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIEC CHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCHHHHHHCCCCCCEEC GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL CCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCC DDDTVYPNGISTSLPAEVQAEFIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCHHHCCCCHHHHHH KGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFHFSRTNSYIGVMIDDLTSRGV CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECHHCCCC TEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQS CHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LAVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIE HCCCCCHHHEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHEEC AGYSVYLDRQAAAIADQQRDEDRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVE CCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHC GMTPAAVALLLVHLRRRNTSERYSA CCCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure TDKVYDVIVIGGGHAGSEAASAAARLGAKTALVTHRRDTIGVMSCNPAIGGLGKGHLVR CCCEEEEEEEECCCCCCHHHHHHHHHCCHHEEEEECCCEEEEEECCCCCCCCCCCHHHH EIDAMDGLMGRVADVAGIQFRMLNKKKGAAVRGPRTQADRKLYRLAMLAAIEATAGLDIV HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE EGDAFDLKVVDGRVAGVIMQDGRVLGAAAVVLTTGTFLRGLIHIGSEKTPAGRVGEAPSI ECCCEEEEEECCEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC GLSATLARLGLRLGRLKTGTPARLDGKTIDWQAVGRQGADEELTPFSLMTDAITTPQIEC CHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHCCCCCCCCCCCHHHHHHCCCCCCEEC GVTRTTEATHRIIVDNIMRSAMYSGQIEGVGPRYCPSIEDKLVKFGERDGHQVFLEPEGL CCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCC DDDTVYPNGISTSLPAEVQAEFIKTIPGLERARIIQPGYAIEYDHVDPRELTPSLEVKRL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCHHHCCCCHHHHHH KGLFLAGQINGTTGYEEAAAQGLAAGINAALRSSDSDPFHFSRTNSYIGVMIDDLTSRGV CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECHHCCCC TEPYRMFTSRAEYRLMLRADNADMRLTPLAMQLGCVSGERERRFTRYQTEIEAGRVLLQS CHHHHHHHCCCCEEEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LAVTPNEARRVGLNINLDGQRRTAYDLLSYPNYDFDVLRKVWPDELGAVAGKVAEALEIE HCCCCCHHHEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHEEC AGYSVYLDRQAAAIADQQRDEDRHIPADFDYTALSGLSNELKAKLGAARPFNIAQAAIVE CCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHCCCCCCHHHHHHHHC GMTPAAVALLLVHLRRRNTSERYSA CCCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA