| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yxiO [H]
Identifier: 209551485
GI number: 209551485
Start: 4059839
End: 4061227
Strand: Direct
Name: yxiO [H]
Synonym: Rleg2_3914
Alternate gene names: 209551485
Gene position: 4059839-4061227 (Clockwise)
Preceding gene: 209551484
Following gene: 209551490
Centisome position: 89.46
GC content: 61.77
Gene sequence:
>1389_bases ATGTTGAATCGCATTGACTGGACAGGAACACAGCCGCCGAAAGCCACGGAGAAGGGCATCTGGGGGTGGATGTTCTTCGA TTGGGCAGCCCAGCCCTTCTTTACCGTGGTCACGACCTTCATCTTCGGTCCCTATTTCGTTTCCCGTCTGACCGATGACC CGGTTTCCGCGCAGACGACGTGGAGCAACATGGCGACGATCTCCTCGGTGATCATCGCCCTGCTTTCGCCCATCCTCGGC TCGATCGCCGACCAGTCGGGCGCGCGCAAACCCTGGATCGGCTTTTTTGCGATCATCAAGATCGTCAGCCTGTTCTGCCT GTGGTTCGCAGCCCCCGGCTCGCCTGTTCTTTATCCGGTCATTTTCATGATCCTTGCCTCGATCTCGGCCGAGTTTTCGA TCGTCTTCAACGATTCGATGATGCCGCGGCTGGTCGCCAAACACGAGGTCGGCAAGCTCTCCAACACAGCCTGGGGGCTC GGTTATCTCGGCGGCATCATCGTGCTCATTGCCGTCGTGACGCTTTTGGCGGCGAGCCCGGAGAGCGGCAAGACCATCCT CGGCCTCGATCCGCTCTTCGGTCTCGATCCTCGGACCGGCCAGGATGCACGCATCACCGGGCCGATCTCGGCCGTCTGGT ATCTGATCTTCATCCTGCCGATGTTCTTCTTCACGCCGGATGTCGACAGAGGTCTTCCGTTCGGCACCGCCGTCCGTGCC GGCCTGCGGGAAGTGAAAAACACGCTTGGCGAACTCAAGGAACGCCGCGGCATCCTGAGATTTCTCATCGCCCGGATGAT CTATCAGGACGGCGTCAACGGCCTGCTGATCCTCGGCGGTATCTTCGCCGCCGGCATGTTCGGCTGGGCAACGATCGAGA TCGGCATTTACGGCATCATCCTGAATGTGGTCGCGATCTTCGGCTGCCTGATCGCCGGCCGCATCGACAAGGGTGTCGGG TCGAAGGTGACCGTCGTCATCAGCCTCACCATGCTGCTTCTCGCCACCATCGGCATCATCTCGACAGGGCCGGGTTACAC CCTGTTCGGCCTGCTGCCGCTGCCGACGGCGGATTCTGGCGGCCTCTTCGGCACCGCGGCGGAAAAAGCCTATATCCTCT ACGGCCTGCTGATCGGGTTCGCCTTCGGGCCGGTGCAGGCCTCGTCGCGCTCCTATCTCGCCCGCAGCGTCAGCCCTGAG GAAGCCGGCCGCTACTTCGGCATCTACGCGCTTTCGGGGCGCGCCACGAGTTTCATGGCGACGCTCCTTTTCTCGCTCAT GACCTATATGAGCGGGTCACCGCGGCTTGGAATGGCCACACTGATCCTGTTTCTCGCCGGTGGCCTGGTGCTGCTCGTCC GCACGCCCTATCCGGCCGATCGCGCGTAG
Upstream 100 bases:
>100_bases CGGCGATCCCAATCTTGCGCGTATTACCGTTGCTGCAGGTATCCTGACCGATCTTGCGCGCGACCGGGCGAGGTGAGACA GTCCGCGGAAAAAGGAGCGG
Downstream 100 bases:
>100_bases GGTCACGCGCGTCGGACCATGACAGAAGCATGGCGCAGTCCTCATTCAGTGCCGGAAATGGCGCATGCCGGTAAAGACCA TCGCAATGCCGTGTTCGTCG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLNRIDWTGTQPPKATEKGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRLTDDPVSAQTTWSNMATISSVIIALLSPILG SIADQSGARKPWIGFFAIIKIVSLFCLWFAAPGSPVLYPVIFMILASISAEFSIVFNDSMMPRLVAKHEVGKLSNTAWGL GYLGGIIVLIAVVTLLAASPESGKTILGLDPLFGLDPRTGQDARITGPISAVWYLIFILPMFFFTPDVDRGLPFGTAVRA GLREVKNTLGELKERRGILRFLIARMIYQDGVNGLLILGGIFAAGMFGWATIEIGIYGIILNVVAIFGCLIAGRIDKGVG SKVTVVISLTMLLLATIGIISTGPGYTLFGLLPLPTADSGGLFGTAAEKAYILYGLLIGFAFGPVQASSRSYLARSVSPE EAGRYFGIYALSGRATSFMATLLFSLMTYMSGSPRLGMATLILFLAGGLVLLVRTPYPADRA
Sequences:
>Translated_462_residues MLNRIDWTGTQPPKATEKGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRLTDDPVSAQTTWSNMATISSVIIALLSPILG SIADQSGARKPWIGFFAIIKIVSLFCLWFAAPGSPVLYPVIFMILASISAEFSIVFNDSMMPRLVAKHEVGKLSNTAWGL GYLGGIIVLIAVVTLLAASPESGKTILGLDPLFGLDPRTGQDARITGPISAVWYLIFILPMFFFTPDVDRGLPFGTAVRA GLREVKNTLGELKERRGILRFLIARMIYQDGVNGLLILGGIFAAGMFGWATIEIGIYGIILNVVAIFGCLIAGRIDKGVG SKVTVVISLTMLLLATIGIISTGPGYTLFGLLPLPTADSGGLFGTAAEKAYILYGLLIGFAFGPVQASSRSYLARSVSPE EAGRYFGIYALSGRATSFMATLLFSLMTYMSGSPRLGMATLILFLAGGLVLLVRTPYPADRA >Mature_462_residues MLNRIDWTGTQPPKATEKGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRLTDDPVSAQTTWSNMATISSVIIALLSPILG SIADQSGARKPWIGFFAIIKIVSLFCLWFAAPGSPVLYPVIFMILASISAEFSIVFNDSMMPRLVAKHEVGKLSNTAWGL GYLGGIIVLIAVVTLLAASPESGKTILGLDPLFGLDPRTGQDARITGPISAVWYLIFILPMFFFTPDVDRGLPFGTAVRA GLREVKNTLGELKERRGILRFLIARMIYQDGVNGLLILGGIFAAGMFGWATIEIGIYGIILNVVAIFGCLIAGRIDKGVG SKVTVVISLTMLLLATIGIISTGPGYTLFGLLPLPTADSGGLFGTAAEKAYILYGLLIGFAFGPVQASSRSYLARSVSPE EAGRYFGIYALSGRATSFMATLLFSLMTYMSGSPRLGMATLILFLAGGLVLLVRTPYPADRA
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49672; Mature: 49672
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRIDWTGTQPPKATEKGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRLTDDPVSAQTT CCCCCCCCCCCCCCCHHCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH WSNMATISSVIIALLSPILGSIADQSGARKPWIGFFAIIKIVSLFCLWFAAPGSPVLYPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IFMILASISAEFSIVFNDSMMPRLVAKHEVGKLSNTAWGLGYLGGIIVLIAVVTLLAASP HHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ESGKTILGLDPLFGLDPRTGQDARITGPISAVWYLIFILPMFFFTPDVDRGLPFGTAVRA CCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GLREVKNTLGELKERRGILRFLIARMIYQDGVNGLLILGGIFAAGMFGWATIEIGIYGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNVVAIFGCLIAGRIDKGVGSKVTVVISLTMLLLATIGIISTGPGYTLFGLLPLPTADSG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC GLFGTAAEKAYILYGLLIGFAFGPVQASSRSYLARSVSPEEAGRYFGIYALSGRATSFMA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCEEEEEEECCCHHHHHH TLLFSLMTYMSGSPRLGMATLILFLAGGLVLLVRTPYPADRA HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC >Mature Secondary Structure MLNRIDWTGTQPPKATEKGIWGWMFFDWAAQPFFTVVTTFIFGPYFVSRLTDDPVSAQTT CCCCCCCCCCCCCCCHHCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHH WSNMATISSVIIALLSPILGSIADQSGARKPWIGFFAIIKIVSLFCLWFAAPGSPVLYPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH IFMILASISAEFSIVFNDSMMPRLVAKHEVGKLSNTAWGLGYLGGIIVLIAVVTLLAASP HHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC ESGKTILGLDPLFGLDPRTGQDARITGPISAVWYLIFILPMFFFTPDVDRGLPFGTAVRA CCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH GLREVKNTLGELKERRGILRFLIARMIYQDGVNGLLILGGIFAAGMFGWATIEIGIYGII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNVVAIFGCLIAGRIDKGVGSKVTVVISLTMLLLATIGIISTGPGYTLFGLLPLPTADSG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC GLFGTAAEKAYILYGLLIGFAFGPVQASSRSYLARSVSPEEAGRYFGIYALSGRATSFMA CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCCEEEEEEECCCHHHHHH TLLFSLMTYMSGSPRLGMATLILFLAGGLVLLVRTPYPADRA HHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]