| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551464
Identifier: 209551464
GI number: 209551464
Start: 4036007
End: 4036444
Strand: Direct
Name: 209551464
Synonym: Rleg2_3893
Alternate gene names: NA
Gene position: 4036007-4036444 (Clockwise)
Preceding gene: 209551458
Following gene: 209551467
Centisome position: 88.94
GC content: 59.13
Gene sequence:
>438_bases ATGGCCCGCATAGACCAGAGCGATGATTGGCGGGACCGCCATGCGCCGACGATCAGCACCTTCGAGTCGCTGGCCATGGA GGCCTATAGCCATCTGCCGGATGAATTTCGCCAGCTGACGACCAACCTCACAATCGAGATCGAAGATTTCCCCGATGACG ACGTTTTCGAGGACATGGCGCTGGAAACCCCTTTCGATCTTCTCGGTCTTTTCGAGGGCAGGGGTATTTCCGAACGTTTC ACGCTGGAAACCGGCGAGATGCCGAACCGCATCCGTCTCTACCGGCGCCCCATTCTCGATTACTGGGCCGAGAACGACGA GACACTCGGCGATATCATCACCCACGTCCTGATCCACGAGATCGGCCACCATTTCGGGCTGAGCGACGACGATATGGAGC GGATCGAGGCTAGCGCCGAGGAAGCCGCCGAGCGCTAA
Upstream 100 bases:
>100_bases GAGTCAACGGCCATTTTCTATGAATTTATTCCTGCCTTTGATTCCGCACTCGAAAATCGGCGAGAAAGGTTCTATATGGC CCGCAAAGGAAGGAATATTC
Downstream 100 bases:
>100_bases TGCATGTCGCCCGGAAGTGTGCACGGTTCCGGGATAACGACATGCATAGAACAAAGAGCTGAAGCCGTGCTTCCGGCAGC ACGCGTTATTGCTCGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MARIDQSDDWRDRHAPTISTFESLAMEAYSHLPDEFRQLTTNLTIEIEDFPDDDVFEDMALETPFDLLGLFEGRGISERF TLETGEMPNRIRLYRRPILDYWAENDETLGDIITHVLIHEIGHHFGLSDDDMERIEASAEEAAER
Sequences:
>Translated_145_residues MARIDQSDDWRDRHAPTISTFESLAMEAYSHLPDEFRQLTTNLTIEIEDFPDDDVFEDMALETPFDLLGLFEGRGISERF TLETGEMPNRIRLYRRPILDYWAENDETLGDIITHVLIHEIGHHFGLSDDDMERIEASAEEAAER >Mature_144_residues ARIDQSDDWRDRHAPTISTFESLAMEAYSHLPDEFRQLTTNLTIEIEDFPDDDVFEDMALETPFDLLGLFEGRGISERFT LETGEMPNRIRLYRRPILDYWAENDETLGDIITHVLIHEIGHHFGLSDDDMERIEASAEEAAER
Specific function: Unknown
COG id: COG3824
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16873; Mature: 16742
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIDQSDDWRDRHAPTISTFESLAMEAYSHLPDEFRQLTTNLTIEIEDFPDDDVFEDMA CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCHHHHHHH LETPFDLLGLFEGRGISERFTLETGEMPNRIRLYRRPILDYWAENDETLGDIITHVLIHE HCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGHHFGLSDDDMERIEASAEEAAER HHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ARIDQSDDWRDRHAPTISTFESLAMEAYSHLPDEFRQLTTNLTIEIEDFPDDDVFEDMA CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCHHHHHHH LETPFDLLGLFEGRGISERFTLETGEMPNRIRLYRRPILDYWAENDETLGDIITHVLIHE HCCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IGHHFGLSDDDMERIEASAEEAAER HHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA