| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phbB [H]
Identifier: 209551392
GI number: 209551392
Start: 3955148
End: 3955873
Strand: Reverse
Name: phbB [H]
Synonym: Rleg2_3821
Alternate gene names: 209551392
Gene position: 3955873-3955148 (Counterclockwise)
Preceding gene: 209551393
Following gene: 209551388
Centisome position: 87.17
GC content: 60.88
Gene sequence:
>726_bases ATGAGCAGAGTGGCTGTGGTCACCGGGGGTACGCGCGGCATTGGTGCGGCCATATCCGTGGCGCTGAAAAACGCCGGTTA CAGGGTTGCCGCCAATTATGCCGGCAACGACGAGAAGGCCAAAGCCTTCCACGACGCCACCGGCGTGCCGGTATTCAAAT GGGATGTTTCGGATTACGCCGCCTGCGGCGAGGGGATCGCCCGGATCGAGAGTGAGATCGGGCCGGTCGAAGTGCTCGTC AACAATGCCGGCATCACCCGCGACGCCATGTTCCACAAGATGACGCCGCAGCAATGGCACGAGGTGATCAATACCAACCT CACCGGCCTGTTCAACATGACGCATCAGGTCTGGACCGGTATGCGCGACCGCAGCTTCGGCCGCATTGTCAATATCTCGT CGATCAACGGCCAGAAGGGCCAGATGGGTCAGGCGAACTATTCGGCGGCAAAAGCCGGCGATCTCGGCTTCACCAAGGCG CTGGCCCAGGAAGGGGCGGCGAAGAACATCACCGTCAACGCCATTTGCCCCGGTTACATCGGAACCGAGATGGTGCTTGC CGTGCCGGAGAAGGTGCTGAACGAACGCATCATTCCGCAGATTCCCGTCGGTCGTCTCGGCGAGCCTGAGGAAATCGCGC GTTGCGTTACCTTCCTCGCCTCTGACGATGCCGGCTTCATCACCGGTTCGACGCTAACCGCCAATGGCGGGCAGTTCTTC GTCTAA
Upstream 100 bases:
>100_bases GGGTGTCGCCATGTGCTTCGAAGCACTTTAAACAGCATACGATCCGTCATTGATTGAAAAATCCCGCCACGGCGGGGCGA AAACAAAAGGGGAGCGGAAC
Downstream 100 bases:
>100_bases CCTGCCCCGATAATTGCAATCGACTTGAAAGCGATAGCGCGTCCCGCGGGACGCGCTATCGCTTTTTGTATGGATGCTCT CCGTGCGGGCATCAGGAACG
Product: acetoacetyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSRVAVVTGGTRGIGAAISVALKNAGYRVAANYAGNDEKAKAFHDATGVPVFKWDVSDYAACGEGIARIESEIGPVEVLV NNAGITRDAMFHKMTPQQWHEVINTNLTGLFNMTHQVWTGMRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKA LAQEGAAKNITVNAICPGYIGTEMVLAVPEKVLNERIIPQIPVGRLGEPEEIARCVTFLASDDAGFITGSTLTANGGQFF V
Sequences:
>Translated_241_residues MSRVAVVTGGTRGIGAAISVALKNAGYRVAANYAGNDEKAKAFHDATGVPVFKWDVSDYAACGEGIARIESEIGPVEVLV NNAGITRDAMFHKMTPQQWHEVINTNLTGLFNMTHQVWTGMRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKA LAQEGAAKNITVNAICPGYIGTEMVLAVPEKVLNERIIPQIPVGRLGEPEEIARCVTFLASDDAGFITGSTLTANGGQFF V >Mature_240_residues SRVAVVTGGTRGIGAAISVALKNAGYRVAANYAGNDEKAKAFHDATGVPVFKWDVSDYAACGEGIARIESEIGPVEVLVN NAGITRDAMFHKMTPQQWHEVINTNLTGLFNMTHQVWTGMRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKAL AQEGAAKNITVNAICPGYIGTEMVLAVPEKVLNERIIPQIPVGRLGEPEEIARCVTFLASDDAGFITGSTLTANGGQFFV
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=38.0952380952381, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=37.6569037656904, Blast_Score=137, Evalue=8e-33, Organism=Homo sapiens, GI4504505, Length=249, Percent_Identity=32.1285140562249, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=30.5439330543933, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=32.6693227091633, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=31.4741035856574, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=31.2, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=30.3643724696356, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI66933014, Length=242, Percent_Identity=28.099173553719, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI109715829, Length=239, Percent_Identity=28.0334728033473, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI59889578, Length=178, Percent_Identity=32.5842696629214, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI83715985, Length=251, Percent_Identity=29.4820717131474, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=30.0813008130081, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4503817, Length=181, Percent_Identity=30.3867403314917, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI31542939, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723750, Length=144, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI226371731, Length=190, Percent_Identity=33.1578947368421, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI20149619, Length=191, Percent_Identity=30.8900523560209, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4503301, Length=187, Percent_Identity=26.2032085561497, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=43.2098765432099, Blast_Score=195, Evalue=2e-51, Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=33.7164750957854, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1790717, Length=239, Percent_Identity=31.3807531380753, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=34.2857142857143, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI87082160, Length=244, Percent_Identity=32.7868852459016, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=28.8065843621399, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=30.0813008130081, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=30, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI2367365, Length=235, Percent_Identity=28.5106382978723, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=28.4615384615385, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787905, Length=239, Percent_Identity=26.7782426778243, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=32.0441988950276, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26.4, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25147288, Length=240, Percent_Identity=44.5833333333333, Blast_Score=169, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=43.0894308943089, Blast_Score=166, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17568967, Length=233, Percent_Identity=32.1888412017167, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=31.7073170731707, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=31.404958677686, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=32.6693227091633, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193203115, Length=232, Percent_Identity=28.448275862069, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI193203117, Length=232, Percent_Identity=28.448275862069, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=29.5546558704453, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17561272, Length=193, Percent_Identity=29.0155440414508, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538182, Length=247, Percent_Identity=27.5303643724696, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17536025, Length=247, Percent_Identity=27.1255060728745, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562990, Length=255, Percent_Identity=28.2352941176471, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=29.1187739463602, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=28.3464566929134, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=27.3764258555133, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=26.6917293233083, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17562904, Length=261, Percent_Identity=28.735632183908, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=25.968992248062, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=28.0769230769231, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=26.0377358490566, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=27.8225806451613, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=27.2030651340996, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=25, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=25.3846153846154, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17565030, Length=260, Percent_Identity=28.8461538461538, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=22.8682170542636, Blast_Score=64, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=28.6259541984733, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=233, Percent_Identity=35.6223175965665, Blast_Score=123, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6324126, Length=188, Percent_Identity=26.5957446808511, Blast_Score=72, Evalue=8e-14, Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=36.3636363636364, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=33.6032388663968, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=32.3770491803279, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859837, Length=230, Percent_Identity=33.4782608695652, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=246, Percent_Identity=30.8943089430894, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=33.0578512396694, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=33.0645161290323, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=30.4166666666667, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24649181, Length=187, Percent_Identity=32.620320855615, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737361, Length=237, Percent_Identity=32.9113924050633, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI116007236, Length=197, Percent_Identity=29.9492385786802, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641232, Length=215, Percent_Identity=29.7674418604651, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI21358495, Length=192, Percent_Identity=29.6875, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24644337, Length=183, Percent_Identity=32.2404371584699, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI161076933, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24584748, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281364494, Length=210, Percent_Identity=32.3809523809524, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24581726, Length=164, Percent_Identity=28.0487804878049, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221331218, Length=236, Percent_Identity=29.2372881355932, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24665243, Length=236, Percent_Identity=29.2372881355932, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21356301, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI221331216, Length=237, Percent_Identity=28.2700421940928, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665247, Length=237, Percent_Identity=28.2700421940928, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=200, Percent_Identity=29, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007238, Length=174, Percent_Identity=29.8850574712644, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 25578; Mature: 25447
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVAVVTGGTRGIGAAISVALKNAGYRVAANYAGNDEKAKAFHDATGVPVFKWDVSDYA CCEEEEEECCCCCHHHHHHEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCHHHH ACGEGIARIESEIGPVEVLVNNAGITRDAMFHKMTPQQWHEVINTNLTGLFNMTHQVWTG HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCC MRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKALAQEGAAKNITVNAICPGYI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC GTEMVLAVPEKVLNERIIPQIPVGRLGEPEEIARCVTFLASDDAGFITGSTLTANGGQFF CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEECCCEEC V C >Mature Secondary Structure SRVAVVTGGTRGIGAAISVALKNAGYRVAANYAGNDEKAKAFHDATGVPVFKWDVSDYA CEEEEEECCCCCHHHHHHEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCHHHH ACGEGIARIESEIGPVEVLVNNAGITRDAMFHKMTPQQWHEVINTNLTGLFNMTHQVWTG HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCC MRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKALAQEGAAKNITVNAICPGYI CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC GTEMVLAVPEKVLNERIIPQIPVGRLGEPEEIARCVTFLASDDAGFITGSTLTANGGQFF CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCEEEECCCEEC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7582015; 11481430 [H]