Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is yebQ [C]

Identifier: 209551382

GI number: 209551382

Start: 3943488

End: 3945026

Strand: Direct

Name: yebQ [C]

Synonym: Rleg2_3811

Alternate gene names: 209551382

Gene position: 3943488-3945026 (Clockwise)

Preceding gene: 209551377

Following gene: 209551383

Centisome position: 86.9

GC content: 63.29

Gene sequence:

>1539_bases
ATGGACATGCAACTCGCGCCTCAGCCGCTCGTGACGGATCCTCGTCGCCGGCTTATCCTCTTCTTCTTCCTGATGACAGC
CATGTTCATGGCGACGCTCGATAATCAGATCGTTTCGACGGCGCTGCCGACGATCGTCGGCGAATTCGGCCATCTCGAGC
GTTTCGGCTGGATCGGCTCGGCCTATCTCCTGGCGCTCAGCGCCGTCATGCCGCTCTATGGCAAGCTCGGCGATCTCTTC
GGTCGCAAATATGTGATGATGACGGCGATCATGATTTTCACCGCCGGCTCGGCGGTCTGCGGCCTCGCGGTCTCGATGAA
CACGCTGATCGCCGCCCGTGTGCTGCAGGGTCTCGGCGGCGGCGGCATCATGGTGTCGATCTTCGCCGTCAATGCCGATC
TGTTCGAGCCGCGCGAGCGGGCGCGTTACCAGAGTTATTCCAGCCTCGTGCTGATGGCGTCGGGCGCGATCGGTCCGGTG
CTCGGCGGCACGATGAGCGACCTTTTCGGCTGGCGTTCGATTTTCCTCGTCAACGTGCCGATCGGCCTGATCGCGCTTGC
CGGCCTTGCCGTGATGTTGCCCTATCGCAAGCCGCATCGCCGCCCGAGGATCGATTATGCCGGTGCGCTGCTGCTCGCCC
TGACGACGACCAGTATCGTGCTTGCCACCGACAGCAGCGAACTGTTCGGCGCATTGGTCTCGCCGCAGAGTATCGGCATC
GTCGCCTTCGGCGTCGTCTGCGCCGTCACCTGGGTATTCGTCGAGCGCCGCGCGCCGGAGCCGATCGTACCGCTGGAGCT
CTTTCGTAATTCGACCTTCAACCTGCTCCTGGTGATCTCGATCATGGGCGGCGCCATCGCCATCGGCATGGTCAATTACC
TCGCGCTCTTTCTGCAGACCACCACCGGCCTTTCGCCCTCTGCCGCCGGCCTTCTCTTCATCCTTCTGACGGGCGGCCTC
GTCTGCGGGTCGCTGTCCGCAGGCCGCATTATCTCAAAAACGGGCCGCTACAAGCCCTTCGCCGTTGCAAGCCTGACCTG
CAGCGCCATCGCCTTCGCATTGATGTCGCAGATCCATGCGGGAACGCCGATCGCCTTCATCGGCGCGATTATGATGCTGC
ATGGCATCGGCATCGGCCTTGCCCAGCAGGTTCCCGTCATCGGCGTGCAGAATGCAGCACCGGCCCGCGACGTCGGCGCC
GCCACCGGGTCGGTGACGCTGTCGCGCATGGGAGGCGCGTCGATCGCTATCTCCATCTATGGCGCCATCATCGCCTCTCA
GCTTAACAAGGTCGGCGTGTCCATTCCCGGTGTCGCCGATATCGAGCAGCTGACGCCGAAGATGATGGCTTCCCTTCCCG
AAGCAAGCCGCCAGTCTGTCGCCGATCTCTATGCCGCCGCCTTCTCGCCGCTCTTCATGACCGCCTGCGCCATTGCGCTG
ATCGGCCTTGTGGCCGCTCTCATGCTGAAGCCGGTGCAACTACCCCGCGCCGGCGAGACTTTAAGACCACAACCGACGAC
GGCCGAAGCCGCGGAATAA

Upstream 100 bases:

>100_bases
GAGCCGTTTCGGATTTTGAATATGCCGATGTCATTAATGTGCCATTGACAAATATATGCTGTCAGCACATAAAAGGCGAC
CAACCCGGAATGATGCTCCC

Downstream 100 bases:

>100_bases
CGAATCGGGGCCGATACCCCATCAGAAGGCGTTTCTTTTGGGTCACAACTATCAAAGATTGCACTTTTCTCGTTTAGCCT
CCGTCATCGGCTCGATTGCT

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MDMQLAPQPLVTDPRRRLILFFFLMTAMFMATLDNQIVSTALPTIVGEFGHLERFGWIGSAYLLALSAVMPLYGKLGDLF
GRKYVMMTAIMIFTAGSAVCGLAVSMNTLIAARVLQGLGGGGIMVSIFAVNADLFEPRERARYQSYSSLVLMASGAIGPV
LGGTMSDLFGWRSIFLVNVPIGLIALAGLAVMLPYRKPHRRPRIDYAGALLLALTTTSIVLATDSSELFGALVSPQSIGI
VAFGVVCAVTWVFVERRAPEPIVPLELFRNSTFNLLLVISIMGGAIAIGMVNYLALFLQTTTGLSPSAAGLLFILLTGGL
VCGSLSAGRIISKTGRYKPFAVASLTCSAIAFALMSQIHAGTPIAFIGAIMMLHGIGIGLAQQVPVIGVQNAAPARDVGA
ATGSVTLSRMGGASIAISIYGAIIASQLNKVGVSIPGVADIEQLTPKMMASLPEASRQSVADLYAAAFSPLFMTACAIAL
IGLVAALMLKPVQLPRAGETLRPQPTTAEAAE

Sequences:

>Translated_512_residues
MDMQLAPQPLVTDPRRRLILFFFLMTAMFMATLDNQIVSTALPTIVGEFGHLERFGWIGSAYLLALSAVMPLYGKLGDLF
GRKYVMMTAIMIFTAGSAVCGLAVSMNTLIAARVLQGLGGGGIMVSIFAVNADLFEPRERARYQSYSSLVLMASGAIGPV
LGGTMSDLFGWRSIFLVNVPIGLIALAGLAVMLPYRKPHRRPRIDYAGALLLALTTTSIVLATDSSELFGALVSPQSIGI
VAFGVVCAVTWVFVERRAPEPIVPLELFRNSTFNLLLVISIMGGAIAIGMVNYLALFLQTTTGLSPSAAGLLFILLTGGL
VCGSLSAGRIISKTGRYKPFAVASLTCSAIAFALMSQIHAGTPIAFIGAIMMLHGIGIGLAQQVPVIGVQNAAPARDVGA
ATGSVTLSRMGGASIAISIYGAIIASQLNKVGVSIPGVADIEQLTPKMMASLPEASRQSVADLYAAAFSPLFMTACAIAL
IGLVAALMLKPVQLPRAGETLRPQPTTAEAAE
>Mature_512_residues
MDMQLAPQPLVTDPRRRLILFFFLMTAMFMATLDNQIVSTALPTIVGEFGHLERFGWIGSAYLLALSAVMPLYGKLGDLF
GRKYVMMTAIMIFTAGSAVCGLAVSMNTLIAARVLQGLGGGGIMVSIFAVNADLFEPRERARYQSYSSLVLMASGAIGPV
LGGTMSDLFGWRSIFLVNVPIGLIALAGLAVMLPYRKPHRRPRIDYAGALLLALTTTSIVLATDSSELFGALVSPQSIGI
VAFGVVCAVTWVFVERRAPEPIVPLELFRNSTFNLLLVISIMGGAIAIGMVNYLALFLQTTTGLSPSAAGLLFILLTGGL
VCGSLSAGRIISKTGRYKPFAVASLTCSAIAFALMSQIHAGTPIAFIGAIMMLHGIGIGLAQQVPVIGVQNAAPARDVGA
ATGSVTLSRMGGASIAISIYGAIIASQLNKVGVSIPGVADIEQLTPKMMASLPEASRQSVADLYAAAFSPLFMTACAIAL
IGLVAALMLKPVQLPRAGETLRPQPTTAEAAE

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=436, Percent_Identity=26.3761467889908, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1790195, Length=424, Percent_Identity=27.122641509434, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788392, Length=342, Percent_Identity=34.5029239766082, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1789042, Length=287, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788710, Length=289, Percent_Identity=27.3356401384083, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1790146, Length=178, Percent_Identity=30.8988764044944, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323735, Length=328, Percent_Identity=29.5731707317073, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6319770, Length=422, Percent_Identity=26.303317535545, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6322958, Length=177, Percent_Identity=31.0734463276836, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325455, Length=168, Percent_Identity=31.547619047619, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=34.8684210526316, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320324, Length=185, Percent_Identity=28.6486486486486, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324954, Length=400, Percent_Identity=22.5, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829
- InterPro:   IPR001958
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 53631; Mature: 53631

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMQLAPQPLVTDPRRRLILFFFLMTAMFMATLDNQIVSTALPTIVGEFGHLERFGWIGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYLLALSAVMPLYGKLGDLFGRKYVMMTAIMIFTAGSAVCGLAVSMNTLIAARVLQGLGG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
GGIMVSIFAVNADLFEPRERARYQSYSSLVLMASGAIGPVLGGTMSDLFGWRSIFLVNVP
CCEEEEEEEECCHHCCHHHHHHHHHHHCEEEEECCCCHHHHCCHHHHHHHHHHEEEEECC
IGLIALAGLAVMLPYRKPHRRPRIDYAGALLLALTTTSIVLATDSSELFGALVSPQSIGI
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHCCCCCCHH
VAFGVVCAVTWVFVERRAPEPIVPLELFRNSTFNLLLVISIMGGAIAIGMVNYLALFLQT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTGLSPSAAGLLFILLTGGLVCGSLSAGRIISKTGRYKPFAVASLTCSAIAFALMSQIHA
HCCCCCHHHHHHHHHHHCCHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GTPIAFIGAIMMLHGIGIGLAQQVPVIGVQNAAPARDVGAATGSVTLSRMGGASIAISIY
CCCHHHHHHHHHHHHCCCCHHCCCCEEECCCCCCCHHHCCCCCCEEHHHCCCCEEHHHHH
GAIIASQLNKVGVSIPGVADIEQLTPKMMASLPEASRQSVADLYAAAFSPLFMTACAIAL
HHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLVAALMLKPVQLPRAGETLRPQPTTAEAAE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDMQLAPQPLVTDPRRRLILFFFLMTAMFMATLDNQIVSTALPTIVGEFGHLERFGWIGS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYLLALSAVMPLYGKLGDLFGRKYVMMTAIMIFTAGSAVCGLAVSMNTLIAARVLQGLGG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
GGIMVSIFAVNADLFEPRERARYQSYSSLVLMASGAIGPVLGGTMSDLFGWRSIFLVNVP
CCEEEEEEEECCHHCCHHHHHHHHHHHCEEEEECCCCHHHHCCHHHHHHHHHHEEEEECC
IGLIALAGLAVMLPYRKPHRRPRIDYAGALLLALTTTSIVLATDSSELFGALVSPQSIGI
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHCCCCCCHH
VAFGVVCAVTWVFVERRAPEPIVPLELFRNSTFNLLLVISIMGGAIAIGMVNYLALFLQT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTGLSPSAAGLLFILLTGGLVCGSLSAGRIISKTGRYKPFAVASLTCSAIAFALMSQIHA
HCCCCCHHHHHHHHHHHCCHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GTPIAFIGAIMMLHGIGIGLAQQVPVIGVQNAAPARDVGAATGSVTLSRMGGASIAISIY
CCCHHHHHHHHHHHHCCCCHHCCCCEEECCCCCCCHHHCCCCCCEEHHHCCCCEEHHHHH
GAIIASQLNKVGVSIPGVADIEQLTPKMMASLPEASRQSVADLYAAAFSPLFMTACAIAL
HHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLVAALMLKPVQLPRAGETLRPQPTTAEAAE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]