| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is metA [H]
Identifier: 209551376
GI number: 209551376
Start: 3936361
End: 3937284
Strand: Reverse
Name: metA [H]
Synonym: Rleg2_3805
Alternate gene names: 209551376
Gene position: 3937284-3936361 (Counterclockwise)
Preceding gene: 209551378
Following gene: 209551375
Centisome position: 86.76
GC content: 57.47
Gene sequence:
>924_bases ATGCCCATCAAGATTCCTGACACGCTGCCCGCCTTTGAAACCCTCGTTCAAGAGGGTGTGCGGGTGATGACCGAGACGCT GGCGATTCGTCAGGATATTCGTCCGCTGCAGATCGGACTGCTCAACTTGATGCCGAACAAGATCAAGACCGAATTGCAGA TGGCCCGCCTTGTCGGCGCCTCGCCGCTGCAGGTCGAGCTGTCGCTGATCCGCATCGGCGGCCACAAGGCGAAGAACACC TCCGAAGATCACCTGCTTGCCTTCTACCAGACCTGGGAGGAGGTGAAGCACCGCAAATTCGACGGCTTCATCATCACCGG GGCGCCGATCGAGTTATTGCCCTACGAGGACGTGACCTATTGGCCGGAGATGCAGGAGATTCTCGACTGGACGGAAACGA ATGTGCATTCGACGATGAACGTCTGCTGGGGCGCGATGGCGGCAATCTATCATTTCCACGGCGTGCCGAAATACGAGCTG AAGGAGAAGGCTTTCGGCGTCTATCGCCACCGCAACCTGAAGCCCTCGTCCATCTATCTCAACGGCTTTTCCGACAATTT CGAGGTGCCGGTGTCGCGCTGGACCGAGGTGCGCCGCGACGATATCGAGAAATCGGACGAGCTGGAGATCCTGATGGAAT CCAGCGAGATGGGCGTCTGCCTCGTGCACGAGAAGCGCGGCCGTCGGCTCTATATGTTCAACCACGTCGAATATGATTCC ACCTCGCTGTCCGACGAGTATTTCCGCGACGTCAATACCGGCGTGCCGATCAAGATGCCGCACAATTATTTCCCGCATAA TGATCCGGCGCTTGCGCCGCAGAACCGCTGGCGCAGCCATGCGCATCTTTTGTTCGGCAACTGGATCAACGAGATCTACC AGACGACGCCGTTTGATGTAGAGGAGATCGGAATGGATCTGTGA
Upstream 100 bases:
>100_bases CGGCTTGCAGCCACGTTAAAAAATTCGCTAAAGGGCCGCGTGCGGACCGGTAGCGATTTTTTTCGCCGCCGGTTTTTTGC TTTTTGATCGAGTGACCGCA
Downstream 100 bases:
>100_bases GGGGCATCCCTTTCTGATCTCGGCCGGTTGCGGTTTGGAACAAATGCGGGCAGGTTCCGGTCGGAATGCTAGATATCAAA CGGACGGTCGATCATGTCGG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPIKIPDTLPAFETLVQEGVRVMTETLAIRQDIRPLQIGLLNLMPNKIKTELQMARLVGASPLQVELSLIRIGGHKAKNT SEDHLLAFYQTWEEVKHRKFDGFIITGAPIELLPYEDVTYWPEMQEILDWTETNVHSTMNVCWGAMAAIYHFHGVPKYEL KEKAFGVYRHRNLKPSSIYLNGFSDNFEVPVSRWTEVRRDDIEKSDELEILMESSEMGVCLVHEKRGRRLYMFNHVEYDS TSLSDEYFRDVNTGVPIKMPHNYFPHNDPALAPQNRWRSHAHLLFGNWINEIYQTTPFDVEEIGMDL
Sequences:
>Translated_307_residues MPIKIPDTLPAFETLVQEGVRVMTETLAIRQDIRPLQIGLLNLMPNKIKTELQMARLVGASPLQVELSLIRIGGHKAKNT SEDHLLAFYQTWEEVKHRKFDGFIITGAPIELLPYEDVTYWPEMQEILDWTETNVHSTMNVCWGAMAAIYHFHGVPKYEL KEKAFGVYRHRNLKPSSIYLNGFSDNFEVPVSRWTEVRRDDIEKSDELEILMESSEMGVCLVHEKRGRRLYMFNHVEYDS TSLSDEYFRDVNTGVPIKMPHNYFPHNDPALAPQNRWRSHAHLLFGNWINEIYQTTPFDVEEIGMDL >Mature_306_residues PIKIPDTLPAFETLVQEGVRVMTETLAIRQDIRPLQIGLLNLMPNKIKTELQMARLVGASPLQVELSLIRIGGHKAKNTS EDHLLAFYQTWEEVKHRKFDGFIITGAPIELLPYEDVTYWPEMQEILDWTETNVHSTMNVCWGAMAAIYHFHGVPKYELK EKAFGVYRHRNLKPSSIYLNGFSDNFEVPVSRWTEVRRDDIEKSDELEILMESSEMGVCLVHEKRGRRLYMFNHVEYDST SLSDEYFRDVNTGVPIKMPHNYFPHNDPALAPQNRWRSHAHLLFGNWINEIYQTTPFDVEEIGMDL
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=308, Percent_Identity=44.1558441558442, Blast_Score=283, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 35736; Mature: 35605
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIPDTLPAFETLVQEGVRVMTETLAIRQDIRPLQIGLLNLMPNKIKTELQMARLVGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELSLIRIGGHKAKNTSEDHLLAFYQTWEEVKHRKFDGFIITGAPIELLPYEDVTY CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCC WPEMQEILDWTETNVHSTMNVCWGAMAAIYHFHGVPKYELKEKAFGVYRHRNLKPSSIYL CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE NGFSDNFEVPVSRWTEVRRDDIEKSDELEILMESSEMGVCLVHEKRGRRLYMFNHVEYDS ECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC TSLSDEYFRDVNTGVPIKMPHNYFPHNDPALAPQNRWRSHAHLLFGNWINEIYQTTPFDV CCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EEIGMDL HHCCCCC >Mature Secondary Structure PIKIPDTLPAFETLVQEGVRVMTETLAIRQDIRPLQIGLLNLMPNKIKTELQMARLVGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELSLIRIGGHKAKNTSEDHLLAFYQTWEEVKHRKFDGFIITGAPIELLPYEDVTY CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCC WPEMQEILDWTETNVHSTMNVCWGAMAAIYHFHGVPKYELKEKAFGVYRHRNLKPSSIYL CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE NGFSDNFEVPVSRWTEVRRDDIEKSDELEILMESSEMGVCLVHEKRGRRLYMFNHVEYDS ECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC TSLSDEYFRDVNTGVPIKMPHNYFPHNDPALAPQNRWRSHAHLLFGNWINEIYQTTPFDV CCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EEIGMDL HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA