| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ywrD [H]
Identifier: 209551350
GI number: 209551350
Start: 3903145
End: 3904926
Strand: Direct
Name: ywrD [H]
Synonym: Rleg2_3779
Alternate gene names: 209551350
Gene position: 3903145-3904926 (Clockwise)
Preceding gene: 209551349
Following gene: 209551351
Centisome position: 86.01
GC content: 64.59
Gene sequence:
>1782_bases ATGACCGAATTCACGACCCGTCCCGAAATCCTCGGCACCTTCGGTGTCGTTACCTCGACGCACTGGATTGGCTCGGCGGT CGGCATTAGCATTCTCGAAAAGGGCGGCAATGCCTTCGATGCCGCGGTAGCGACGGGATTCGTACTGCAGATCGTCGAGC CGCATCTCTGCGGCCCGGGCGGCGACCTGCCCGCGGTGATCTATTCGAAGAAAAAGGACAAGGTCGAGGTCATCTCAGCG CAAGGGCCGGCACCCGCCGGCGCGACGATCGAGCACTATACCAGCGAAGGCCTGACGCTGATCCCCGGTGACGGCCTGCT TGCGACAGTCATCCCCGGCGCCTTCGACGGCTGGATGCTGATGCTGCGTGACTACGGCACGATGAGCGTGCGCGACGTTC TGGAACCGGCGATCTATTACGCCGAGCACGGCCATCCCCTGCTGCCGCGCGTCTCCGCGACCATCAAGGGGCTTGCGGCC TTCTTCGAAAAGGAATGGCCGACCTCCTACGCGACCTGGCTGCCCGGCGGCAGCGTCCCCGCAGCACAGGCGAATTTCAG GAATCCGGTGCTTGCCGAAACCTGGAAACGGGTCATTGCCGAAGCCGAGGCAAAAAGCGGCCGGGAGGCACAGGTGGAGG CGGCGCGCGACGCCTTCTACCGCGGCTTCATCGCTGAAAAGATCGATGCCTATCTGAAGATTGCCGAAGTGATGGATGCG AGCGGCAGCCGCCACAAGGGCGTGCTGACCGCCAACGACATGGCGACCTGGTCGGCAGCGATCGAGGCGCCGCTGACCTA TGACTATCACGGCTGGACCATCGCCAAGACCGGTCCCTGGGGCCAGGGCCCGGTCTTCCTGCAGGCCCTGTCGATCCTCA AGGAGTTGGATCTCGCCGCGATGGACCCTGATGGCGCCGATTTCGTCCATACCGTTACCGAGGCGATGAAGCTCGCCTTC GCCGACCGCGAGGTCTATTACGGCGATCCCGATTTTTCCGACGTCCCCGTCGCGCATCTGCTGTCGGATGCCTATGCGAG CGAGCGCCGCAAGCTGATCGGCGCCGACGCCTCCTTCGATCTTCGCCCCGGCATCGTTCCAGGCTTCGAGGCGCAGCATG ATCTGACGATGAAGATGCTCGGCGCCGCTTCCGGGACCGGGACGGTTTACGAGCCGACCATGGCGCATCTGGAAAAACGC GGCGACACCGTGCATATCGACGTGATCGACCGCGACGGCAACATGGTCTCCGTCACCCCCTCCGGCGGCTGGCTGCAGTC TTCACCAACCGTTCCCGGCCTCGGCTTCTGCCTCAATTCCCGCGCCCAGATGTTCTGGCTGAAGGCTGGCCTGCCGACCT CGCTGGCGCCGGGAAAGCGGCCGCGCACGACGCTGACGCCTTCGCTCGGCCTTTACGAGGGCCGCCCGACCCTGGCTTTC GGCACGCCGGGCGGCGACCAGCAGGAACAATGGCAGCTCTCCTTTTTCTTGCGCCATGTTAATCACAAGCTGAACCTGCA GGCAGCAATCGATCACCCGCTGTTTCACACCGCCCATTTTCCGAGCTCCTTCTATCCGCGCACCCGCGAACCCGGCAGCC TGATGGCCGAAGCGAATTTCGGCCCCGATGTGCTCGATGCGCTCACCCGCAAAGGCCACAAGCTGACTGTCACCGATCCC TGGACCATCGGCCGGCTGACCGCAGCGCGGCGCGATACCGACGGGCTGCTGCGTGCCGCGGCCACCCCGCGCCTCATGCA GGCCTATGCGGTCGGACGATAG
Upstream 100 bases:
>100_bases TCCTCTCCGCGCGCTCGGCACACGCCGGAGCTTCGAGCCATCCGACTTCCTAGAAAAGACATTCGGCCAGAAAAGACATC CGGCCAGAAGGGCATCCCGA
Downstream 100 bases:
>100_bases CGCCTGAGCGCGCGTCGTCGACCGCTTCCAAGAGGGGTGGAGGCAACAAGTATTACGGGAAAATAACCCGGGCCGGTGGT GCGCGACCGGCTCTTTTTGC
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MTEFTTRPEILGTFGVVTSTHWIGSAVGISILEKGGNAFDAAVATGFVLQIVEPHLCGPGGDLPAVIYSKKKDKVEVISA QGPAPAGATIEHYTSEGLTLIPGDGLLATVIPGAFDGWMLMLRDYGTMSVRDVLEPAIYYAEHGHPLLPRVSATIKGLAA FFEKEWPTSYATWLPGGSVPAAQANFRNPVLAETWKRVIAEAEAKSGREAQVEAARDAFYRGFIAEKIDAYLKIAEVMDA SGSRHKGVLTANDMATWSAAIEAPLTYDYHGWTIAKTGPWGQGPVFLQALSILKELDLAAMDPDGADFVHTVTEAMKLAF ADREVYYGDPDFSDVPVAHLLSDAYASERRKLIGADASFDLRPGIVPGFEAQHDLTMKMLGAASGTGTVYEPTMAHLEKR GDTVHIDVIDRDGNMVSVTPSGGWLQSSPTVPGLGFCLNSRAQMFWLKAGLPTSLAPGKRPRTTLTPSLGLYEGRPTLAF GTPGGDQQEQWQLSFFLRHVNHKLNLQAAIDHPLFHTAHFPSSFYPRTREPGSLMAEANFGPDVLDALTRKGHKLTVTDP WTIGRLTAARRDTDGLLRAAATPRLMQAYAVGR
Sequences:
>Translated_593_residues MTEFTTRPEILGTFGVVTSTHWIGSAVGISILEKGGNAFDAAVATGFVLQIVEPHLCGPGGDLPAVIYSKKKDKVEVISA QGPAPAGATIEHYTSEGLTLIPGDGLLATVIPGAFDGWMLMLRDYGTMSVRDVLEPAIYYAEHGHPLLPRVSATIKGLAA FFEKEWPTSYATWLPGGSVPAAQANFRNPVLAETWKRVIAEAEAKSGREAQVEAARDAFYRGFIAEKIDAYLKIAEVMDA SGSRHKGVLTANDMATWSAAIEAPLTYDYHGWTIAKTGPWGQGPVFLQALSILKELDLAAMDPDGADFVHTVTEAMKLAF ADREVYYGDPDFSDVPVAHLLSDAYASERRKLIGADASFDLRPGIVPGFEAQHDLTMKMLGAASGTGTVYEPTMAHLEKR GDTVHIDVIDRDGNMVSVTPSGGWLQSSPTVPGLGFCLNSRAQMFWLKAGLPTSLAPGKRPRTTLTPSLGLYEGRPTLAF GTPGGDQQEQWQLSFFLRHVNHKLNLQAAIDHPLFHTAHFPSSFYPRTREPGSLMAEANFGPDVLDALTRKGHKLTVTDP WTIGRLTAARRDTDGLLRAAATPRLMQAYAVGR >Mature_592_residues TEFTTRPEILGTFGVVTSTHWIGSAVGISILEKGGNAFDAAVATGFVLQIVEPHLCGPGGDLPAVIYSKKKDKVEVISAQ GPAPAGATIEHYTSEGLTLIPGDGLLATVIPGAFDGWMLMLRDYGTMSVRDVLEPAIYYAEHGHPLLPRVSATIKGLAAF FEKEWPTSYATWLPGGSVPAAQANFRNPVLAETWKRVIAEAEAKSGREAQVEAARDAFYRGFIAEKIDAYLKIAEVMDAS GSRHKGVLTANDMATWSAAIEAPLTYDYHGWTIAKTGPWGQGPVFLQALSILKELDLAAMDPDGADFVHTVTEAMKLAFA DREVYYGDPDFSDVPVAHLLSDAYASERRKLIGADASFDLRPGIVPGFEAQHDLTMKMLGAASGTGTVYEPTMAHLEKRG DTVHIDVIDRDGNMVSVTPSGGWLQSSPTVPGLGFCLNSRAQMFWLKAGLPTSLAPGKRPRTTLTPSLGLYEGRPTLAFG TPGGDQQEQWQLSFFLRHVNHKLNLQAAIDHPLFHTAHFPSSFYPRTREPGSLMAEANFGPDVLDALTRKGHKLTVTDPW TIGRLTAARRDTDGLLRAAATPRLMQAYAVGR
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=526, Percent_Identity=24.5247148288973, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915090, Length=526, Percent_Identity=24.5247148288973, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915096, Length=526, Percent_Identity=24.5247148288973, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI73915094, Length=526, Percent_Identity=24.5247148288973, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI113429324, Length=518, Percent_Identity=22.5868725868726, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI113429326, Length=529, Percent_Identity=23.062381852552, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI153266885, Length=568, Percent_Identity=22.3591549295775, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI153266901, Length=569, Percent_Identity=22.3198594024605, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789856, Length=588, Percent_Identity=27.891156462585, Blast_Score=191, Evalue=1e-49, Organism=Caenorhabditis elegans, GI72000294, Length=537, Percent_Identity=23.463687150838, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI212646519, Length=537, Percent_Identity=23.463687150838, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI18859893, Length=562, Percent_Identity=24.7330960854093, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI161077496, Length=513, Percent_Identity=25.9259259259259, Blast_Score=103, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 64071; Mature: 63940
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFTTRPEILGTFGVVTSTHWIGSAVGISILEKGGNAFDAAVATGFVLQIVEPHLCGPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC GDLPAVIYSKKKDKVEVISAQGPAPAGATIEHYTSEGLTLIPGDGLLATVIPGAFDGWML CCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEECCCCEEEEECCCCCHHHHH MLRDYGTMSVRDVLEPAIYYAEHGHPLLPRVSATIKGLAAFFEKEWPTSYATWLPGGSVP HHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC AAQANFRNPVLAETWKRVIAEAEAKSGREAQVEAARDAFYRGFIAEKIDAYLKIAEVMDA CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGSRHKGVLTANDMATWSAAIEAPLTYDYHGWTIAKTGPWGQGPVFLQALSILKELDLAA CCCCCCCEEEECCCHHHHHHHCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCEE MDPDGADFVHTVTEAMKLAFADREVYYGDPDFSDVPVAHLLSDAYASERRKLIGADASFD ECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC LRPGIVPGFEAQHDLTMKMLGAASGTGTVYEPTMAHLEKRGDTVHIDVIDRDGNMVSVTP CCCCCCCCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHCCCEEEEEEEECCCCEEEECC SGGWLQSSPTVPGLGFCLNSRAQMFWLKAGLPTSLAPGKRPRTTLTPSLGLYEGRPTLAF CCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE GTPGGDQQEQWQLSFFLRHVNHKLNLQAAIDHPLFHTAHFPSSFYPRTREPGSLMAEANF CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCC GPDVLDALTRKGHKLTVTDPWTIGRLTAARRDTDGLLRAAATPRLMQAYAVGR CHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure TEFTTRPEILGTFGVVTSTHWIGSAVGISILEKGGNAFDAAVATGFVLQIVEPHLCGPG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC GDLPAVIYSKKKDKVEVISAQGPAPAGATIEHYTSEGLTLIPGDGLLATVIPGAFDGWML CCCCEEEECCCCCCEEEEECCCCCCCCCCHHHHCCCCCEEECCCCEEEEECCCCCHHHHH MLRDYGTMSVRDVLEPAIYYAEHGHPLLPRVSATIKGLAAFFEKEWPTSYATWLPGGSVP HHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC AAQANFRNPVLAETWKRVIAEAEAKSGREAQVEAARDAFYRGFIAEKIDAYLKIAEVMDA CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SGSRHKGVLTANDMATWSAAIEAPLTYDYHGWTIAKTGPWGQGPVFLQALSILKELDLAA CCCCCCCEEEECCCHHHHHHHCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCEE MDPDGADFVHTVTEAMKLAFADREVYYGDPDFSDVPVAHLLSDAYASERRKLIGADASFD ECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC LRPGIVPGFEAQHDLTMKMLGAASGTGTVYEPTMAHLEKRGDTVHIDVIDRDGNMVSVTP CCCCCCCCCCCCCCHHHHHHHCCCCCCCEECHHHHHHHHCCCEEEEEEEECCCCEEEECC SGGWLQSSPTVPGLGFCLNSRAQMFWLKAGLPTSLAPGKRPRTTLTPSLGLYEGRPTLAF CCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCEEEE GTPGGDQQEQWQLSFFLRHVNHKLNLQAAIDHPLFHTAHFPSSFYPRTREPGSLMAEANF CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCC GPDVLDALTRKGHKLTVTDPWTIGRLTAARRDTDGLLRAAATPRLMQAYAVGR CHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]