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The map label for this gene is visC [C]

Identifier: 209551343

GI number: 209551343

Start: 3896174

End: 3897388

Strand: Direct

Name: visC [C]

Synonym: Rleg2_3772

Alternate gene names: 209551343

Gene position: 3896174-3897388 (Clockwise)

Preceding gene: 209551335

Following gene: 209551349

Centisome position: 85.86

GC content: 64.53

Gene sequence:

>1215_bases
ATGCTGGATATGCTGGTTGTGGGCGGGGGTTATGTCGGCCTTTCCGCCGCTGTCGCGGTCAAGCAGGCAGCACCGCATCT
CAACGTCGCGGTCGTCGAGGCGGCCCCCGAACATGTTTGGAAAAACGACACGCGCGCTTCGGCCGTCATTGCGGCGGCGG
CAAAGATGCTGGAAATCTTCGGCATCTGGAACGAGATCGAGCCGGAGGCTCAGCCGATCACCAAGATGATCGTCACCGAT
TCCAAAACCTCCGATCCGGTCCGCCCGGTTTTTCTGACCTTCGACGGCGAAGTGGCCGAAGGCCGGCCTTTCGCCCACAT
GATCCCGAATGTGGCGATGGTCGCAGCCCTGCGCGGCGTCTGCGAACGCCTCGGCATCGACATCCGCCATGGGCTCGGCG
CCACCGAGCTAAAGACCGAAGACAGCCATGTGACTGTCACGCTTTCGGACGGCAGCACGTTGGAGAGCCGGCTGCTGGTC
GCCTGCGACGGCGTGCGCTCGAAACTGCGCGACCTCGCCGGCATCAAGACCGTCACCTGGGACTACGGCCAGTCGGGCAT
CGTTGCGACGGTCGAACATGAGCGGCCGCATGAGGGCTGCGCAGAAGAGCATTTCCTGCCGGCCGGCCCCTTTGCCATCC
TGCCGCTCCGCAACAACCGCTCCTCGCTGGTCTGGACGGAGCGGACGCATGATGCGGACCGGCTGGTTGGCGCCGACGAT
CTGGTCTTCGAGGAGGAATTGGAGCGCCGCTTCGGCCACAAGCTCGGGGCACTGAAGGTCATCGGCGACAAACGCGCCTT
TCCGCTCGGCCTGACACTGGCGCGCGCCTTCGTTGCACCGCGTTTTGCGCTGGCCGGCGACGCCGCCCATGGCATTCACC
CGATTTCGGGACAGGGCCTCAATCTCGGTTTCAAGGATGTGGCGGCACTTGCCGAAACGATCGTCGAGGCCGATCGCCTC
GGCCTCGATATCGGCTCGATCAACATTCTCGAGCGCTACCAGACCTGGCGCCGCTTCGACACGTTCCGGATGGGAATGAC
GACAGACGTGCTGAACCGGCTATTCTCCAACGACGCAACGCCGATCCGCATCGCCCGCGACATCGGCCTCGGCCTCGTCG
ACCGGCTGCCGCGCCTCAAGTCCTTCTTCATCGGCCAGGCGGCCGGAACGACGGCAAAGGACAATCCGCGGCTGCTGGCC
GGCCAAGCGATCTAA

Upstream 100 bases:

>100_bases
ATGTCTCGCGCGTCATTTTGCATGCCTCCCGGCGGTAGGAAGTGAAGTTGCGATGATCTATATAGGTCACATCTGAGGCA
CAAGGTAAGGGAGCGGCGCG

Downstream 100 bases:

>100_bases
AACCCGATTTTCAGAGACGTTATTCGTCGAGGCGGCGGGCTTCAGAGACCAGCATGATCGGAATACCATCGCGGATCGGA
TAGGCAAGCCGCGCCTTTTC

Product: 2-octaprenyl-6-methoxyphenyl hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLDMLVVGGGYVGLSAAVAVKQAAPHLNVAVVEAAPEHVWKNDTRASAVIAAAAKMLEIFGIWNEIEPEAQPITKMIVTD
SKTSDPVRPVFLTFDGEVAEGRPFAHMIPNVAMVAALRGVCERLGIDIRHGLGATELKTEDSHVTVTLSDGSTLESRLLV
ACDGVRSKLRDLAGIKTVTWDYGQSGIVATVEHERPHEGCAEEHFLPAGPFAILPLRNNRSSLVWTERTHDADRLVGADD
LVFEEELERRFGHKLGALKVIGDKRAFPLGLTLARAFVAPRFALAGDAAHGIHPISGQGLNLGFKDVAALAETIVEADRL
GLDIGSINILERYQTWRRFDTFRMGMTTDVLNRLFSNDATPIRIARDIGLGLVDRLPRLKSFFIGQAAGTTAKDNPRLLA
GQAI

Sequences:

>Translated_404_residues
MLDMLVVGGGYVGLSAAVAVKQAAPHLNVAVVEAAPEHVWKNDTRASAVIAAAAKMLEIFGIWNEIEPEAQPITKMIVTD
SKTSDPVRPVFLTFDGEVAEGRPFAHMIPNVAMVAALRGVCERLGIDIRHGLGATELKTEDSHVTVTLSDGSTLESRLLV
ACDGVRSKLRDLAGIKTVTWDYGQSGIVATVEHERPHEGCAEEHFLPAGPFAILPLRNNRSSLVWTERTHDADRLVGADD
LVFEEELERRFGHKLGALKVIGDKRAFPLGLTLARAFVAPRFALAGDAAHGIHPISGQGLNLGFKDVAALAETIVEADRL
GLDIGSINILERYQTWRRFDTFRMGMTTDVLNRLFSNDATPIRIARDIGLGLVDRLPRLKSFFIGQAAGTTAKDNPRLLA
GQAI
>Mature_404_residues
MLDMLVVGGGYVGLSAAVAVKQAAPHLNVAVVEAAPEHVWKNDTRASAVIAAAAKMLEIFGIWNEIEPEAQPITKMIVTD
SKTSDPVRPVFLTFDGEVAEGRPFAHMIPNVAMVAALRGVCERLGIDIRHGLGATELKTEDSHVTVTLSDGSTLESRLLV
ACDGVRSKLRDLAGIKTVTWDYGQSGIVATVEHERPHEGCAEEHFLPAGPFAILPLRNNRSSLVWTERTHDADRLVGADD
LVFEEELERRFGHKLGALKVIGDKRAFPLGLTLARAFVAPRFALAGDAAHGIHPISGQGLNLGFKDVAALAETIVEADRL
GLDIGSINILERYQTWRRFDTFRMGMTTDVLNRLFSNDATPIRIARDIGLGLVDRLPRLKSFFIGQAAGTTAKDNPRLLA
GQAI

Specific function: Not Yet Known. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=406, Percent_Identity=30.7881773399015, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI32967307, Length=271, Percent_Identity=36.1623616236162, Blast_Score=159, Evalue=3e-39,
Organism=Escherichia coli, GI1789274, Length=381, Percent_Identity=34.9081364829396, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI1789273, Length=397, Percent_Identity=35.0125944584383, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1786883, Length=393, Percent_Identity=30.7888040712468, Blast_Score=175, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI25146631, Length=441, Percent_Identity=27.6643990929705, Blast_Score=154, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6321694, Length=472, Percent_Identity=27.1186440677966, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19920760, Length=425, Percent_Identity=28.2352941176471, Blast_Score=141, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 43756; Mature: 43756

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMLVVGGGYVGLSAAVAVKQAAPHLNVAVVEAAPEHVWKNDTRASAVIAAAAKMLEIF
CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHH
GIWNEIEPEAQPITKMIVTDSKTSDPVRPVFLTFDGEVAEGRPFAHMIPNVAMVAALRGV
HHHCCCCCCHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
CERLGIDIRHGLGATELKTEDSHVTVTLSDGSTLESRLLVACDGVRSKLRDLAGIKTVTW
HHHCCCCHHCCCCCCEEECCCCEEEEEECCCCCCCHHEEEEEHHHHHHHHHHHCCEEEEE
DYGQSGIVATVEHERPHEGCAEEHFLPAGPFAILPLRNNRSSLVWTERTHDADRLVGADD
ECCCCCEEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCCCH
LVFEEELERRFGHKLGALKVIGDKRAFPLGLTLARAFVAPRFALAGDAAHGIHPISGQGL
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
NLGFKDVAALAETIVEADRLGLDIGSINILERYQTWRRFDTFRMGMTTDVLNRLFSNDAT
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PIRIARDIGLGLVDRLPRLKSFFIGQAAGTTAKDNPRLLAGQAI
CEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MLDMLVVGGGYVGLSAAVAVKQAAPHLNVAVVEAAPEHVWKNDTRASAVIAAAAKMLEIF
CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHH
GIWNEIEPEAQPITKMIVTDSKTSDPVRPVFLTFDGEVAEGRPFAHMIPNVAMVAALRGV
HHHCCCCCCHHHHEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
CERLGIDIRHGLGATELKTEDSHVTVTLSDGSTLESRLLVACDGVRSKLRDLAGIKTVTW
HHHCCCCHHCCCCCCEEECCCCEEEEEECCCCCCCHHEEEEEHHHHHHHHHHHCCEEEEE
DYGQSGIVATVEHERPHEGCAEEHFLPAGPFAILPLRNNRSSLVWTERTHDADRLVGADD
ECCCCCEEEEEECCCCCCCCCHHCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCCCH
LVFEEELERRFGHKLGALKVIGDKRAFPLGLTLARAFVAPRFALAGDAAHGIHPISGQGL
HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCC
NLGFKDVAALAETIVEADRLGLDIGSINILERYQTWRRFDTFRMGMTTDVLNRLFSNDAT
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PIRIARDIGLGLVDRLPRLKSFFIGQAAGTTAKDNPRLLAGQAI
CEEEEHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]