| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is cbiO2 [H]
Identifier: 209551293
GI number: 209551293
Start: 3848956
End: 3849750
Strand: Reverse
Name: cbiO2 [H]
Synonym: Rleg2_3721
Alternate gene names: 209551293
Gene position: 3849750-3848956 (Counterclockwise)
Preceding gene: 209551294
Following gene: 209551290
Centisome position: 84.83
GC content: 63.27
Gene sequence:
>795_bases ATGATCAGCGTCAAGGATATCAAGGTCGTTTTCGGCCGCGGCACGCCGCTGCAGAAGCAGGCGCTGAACGGCGTCAGCCT GATCATCGAGCAGGGCTCCTTCGTTACCGTCATCGGCTCCAACGGTGCCGGCAAATCGACGCTGCTCGGCGTGCTCGCCG GCGACGTCCTGCCGAGCGAGGGGCAGGTGCTGATCGGCAAGAACGAGGTGACGCGCAAATCGACGGCATCACGCGCCGGT CTCGTCGCGCGTGTCTTCCAGGATCCGCTGACGGGAAGCTGCGGTTCGCTGTCGATCGAGGAAAATCTTGCTCTGGCTGC CCGCCGCGGCGAGAAGCGCGGGCTTGCGCCGGCGCTCGGCGGCAACAGGCGCGACTATTTCCGGGAGCGGATTGCCGAAC TCAATCTCGGGCTGGAAAACCGGCTGAAGGACCGCATGGATCTGCTCTCCGGCGGGCAGCGCCAGGCCGTGTCGCTTGTC ATGGCAACGCTTGCCGGCTCGGAAGTGCTGCTGCTCGACGAACATACGGCAGCACTCGATCCCGGGATGGCGGAGTTCGT GATGAACCTCACGCAGAAGATCGTTGCCGAGCGCAAGCTGACGACGATGATGGTGACGCATTCCATGCGCCAGGCGCTGG ATTACGGCCACCGCACGATCATGCTGCATGGCGGCGAAATCGTTCTCGATGTCGCGGGCGACAACAGAAAGAACCTGCAG GTCGAGGATCTGATCGCCATGTTCCGCAAGATGCGCGGCCAGACACTCGACGACGATGCTTTGCTGATCGGCTAG
Upstream 100 bases:
>100_bases GCGACGTCATCGGCCTGCAGGCCTCCGACCTCAATTTCGTGACGGCGGTGCTGGTCACCGTGGCGCTCATCCTTCCCCGT CTTCGCGGAGGTGCCGCATC
Downstream 100 bases:
>100_bases CCTGACATGGTGCTGATCACCTGGCCTGGGTGAGCAGGATCTTTGCGGCGAAGATCGAGAAGACGCCGGCGAAGGTATAG TCGATGCCGCGCAACACCTT
Product: ABC transporter
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MISVKDIKVVFGRGTPLQKQALNGVSLIIEQGSFVTVIGSNGAGKSTLLGVLAGDVLPSEGQVLIGKNEVTRKSTASRAG LVARVFQDPLTGSCGSLSIEENLALAARRGEKRGLAPALGGNRRDYFRERIAELNLGLENRLKDRMDLLSGGQRQAVSLV MATLAGSEVLLLDEHTAALDPGMAEFVMNLTQKIVAERKLTTMMVTHSMRQALDYGHRTIMLHGGEIVLDVAGDNRKNLQ VEDLIAMFRKMRGQTLDDDALLIG
Sequences:
>Translated_264_residues MISVKDIKVVFGRGTPLQKQALNGVSLIIEQGSFVTVIGSNGAGKSTLLGVLAGDVLPSEGQVLIGKNEVTRKSTASRAG LVARVFQDPLTGSCGSLSIEENLALAARRGEKRGLAPALGGNRRDYFRERIAELNLGLENRLKDRMDLLSGGQRQAVSLV MATLAGSEVLLLDEHTAALDPGMAEFVMNLTQKIVAERKLTTMMVTHSMRQALDYGHRTIMLHGGEIVLDVAGDNRKNLQ VEDLIAMFRKMRGQTLDDDALLIG >Mature_264_residues MISVKDIKVVFGRGTPLQKQALNGVSLIIEQGSFVTVIGSNGAGKSTLLGVLAGDVLPSEGQVLIGKNEVTRKSTASRAG LVARVFQDPLTGSCGSLSIEENLALAARRGEKRGLAPALGGNRRDYFRERIAELNLGLENRLKDRMDLLSGGQRQAVSLV MATLAGSEVLLLDEHTAALDPGMAEFVMNLTQKIVAERKLTTMMVTHSMRQALDYGHRTIMLHGGEIVLDVAGDNRKNLQ VEDLIAMFRKMRGQTLDDDALLIG
Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]
COG id: COG1101
COG function: function code R; ABC-type uncharacterized transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=228, Percent_Identity=29.3859649122807, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI150417984, Length=234, Percent_Identity=29.4871794871795, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI21536376, Length=236, Percent_Identity=26.6949152542373, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI27477115, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27262624, Length=202, Percent_Identity=30.1980198019802, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27262626, Length=202, Percent_Identity=30.1980198019802, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=26.9406392694064, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=26.9406392694064, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI9961252, Length=205, Percent_Identity=28.780487804878, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4505771, Length=205, Percent_Identity=28.780487804878, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27436953, Length=235, Percent_Identity=25.1063829787234, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI27881501, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI30795238, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI73747915, Length=224, Percent_Identity=25.4464285714286, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI42741659, Length=215, Percent_Identity=29.3023255813954, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI9961250, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082268, Length=244, Percent_Identity=31.9672131147541, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1786253, Length=227, Percent_Identity=29.5154185022026, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786398, Length=295, Percent_Identity=28.8135593220339, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=28.3261802575107, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1786345, Length=210, Percent_Identity=33.8095238095238, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=29.045643153527, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1789032, Length=229, Percent_Identity=29.6943231441048, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=31.6455696202532, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082267, Length=210, Percent_Identity=30.4761904761905, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786872, Length=257, Percent_Identity=31.5175097276265, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786803, Length=237, Percent_Identity=29.957805907173, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787164, Length=234, Percent_Identity=31.6239316239316, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1790544, Length=244, Percent_Identity=29.0983606557377, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790162, Length=242, Percent_Identity=30.5785123966942, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788450, Length=234, Percent_Identity=29.0598290598291, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI48995001, Length=245, Percent_Identity=27.3469387755102, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787105, Length=245, Percent_Identity=30.2040816326531, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787547, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=31.651376146789, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787500, Length=233, Percent_Identity=27.8969957081545, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=29.5833333333333, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788506, Length=243, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87081782, Length=248, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787370, Length=212, Percent_Identity=27.3584905660377, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790467, Length=205, Percent_Identity=27.8048780487805, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1790739, Length=209, Percent_Identity=29.1866028708134, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787112, Length=227, Percent_Identity=26.8722466960352, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=28.3720930232558, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789963, Length=244, Percent_Identity=25.8196721311475, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=30.4761904761905, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786703, Length=217, Percent_Identity=30.8755760368664, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=28.0193236714976, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788053, Length=217, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787143, Length=195, Percent_Identity=29.7435897435897, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790190, Length=208, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789962, Length=196, Percent_Identity=27.0408163265306, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71983516, Length=220, Percent_Identity=29.0909090909091, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71983510, Length=220, Percent_Identity=29.0909090909091, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71983523, Length=212, Percent_Identity=29.2452830188679, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=30, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193209708, Length=244, Percent_Identity=29.0983606557377, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17510237, Length=215, Percent_Identity=29.7674418604651, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI212646699, Length=224, Percent_Identity=27.2321428571429, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533608, Length=214, Percent_Identity=28.0373831775701, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71984940, Length=193, Percent_Identity=32.6424870466321, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211015, Length=195, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193208177, Length=234, Percent_Identity=23.9316239316239, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193211017, Length=194, Percent_Identity=30.9278350515464, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17543740, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI71996809, Length=189, Percent_Identity=31.7460317460317, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17541710, Length=161, Percent_Identity=31.6770186335404, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146777, Length=209, Percent_Identity=27.7511961722488, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565938, Length=197, Percent_Identity=25.3807106598985, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193202349, Length=232, Percent_Identity=28.448275862069, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534520, Length=203, Percent_Identity=25.615763546798, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115535101, Length=216, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567269, Length=197, Percent_Identity=29.4416243654822, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17567265, Length=225, Percent_Identity=28, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=227, Percent_Identity=27.7533039647577, Blast_Score=63, Evalue=4e-11, Organism=Drosophila melanogaster, GI24659289, Length=210, Percent_Identity=29.5238095238095, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI85726357, Length=247, Percent_Identity=25.9109311740891, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015856 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28434; Mature: 28434
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVKDIKVVFGRGTPLQKQALNGVSLIIEQGSFVTVIGSNGAGKSTLLGVLAGDVLPSE CCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCC GQVLIGKNEVTRKSTASRAGLVARVFQDPLTGSCGSLSIEENLALAARRGEKRGLAPALG CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCC GNRRDYFRERIAELNLGLENRLKDRMDLLSGGQRQAVSLVMATLAGSEVLLLDEHTAALD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHCC PGMAEFVMNLTQKIVAERKLTTMMVTHSMRQALDYGHRTIMLHGGEIVLDVAGDNRKNLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCC VEDLIAMFRKMRGQTLDDDALLIG HHHHHHHHHHHCCCCCCCCCEEEC >Mature Secondary Structure MISVKDIKVVFGRGTPLQKQALNGVSLIIEQGSFVTVIGSNGAGKSTLLGVLAGDVLPSE CCCCEEEEEEECCCCCHHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCC GQVLIGKNEVTRKSTASRAGLVARVFQDPLTGSCGSLSIEENLALAARRGEKRGLAPALG CCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCC GNRRDYFRERIAELNLGLENRLKDRMDLLSGGQRQAVSLVMATLAGSEVLLLDEHTAALD CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHCC PGMAEFVMNLTQKIVAERKLTTMMVTHSMRQALDYGHRTIMLHGGEIVLDVAGDNRKNLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCC VEDLIAMFRKMRGQTLDDDALLIG HHHHHHHHHHHCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]