| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551287
Identifier: 209551287
GI number: 209551287
Start: 3842801
End: 3843469
Strand: Reverse
Name: 209551287
Synonym: Rleg2_3715
Alternate gene names: NA
Gene position: 3843469-3842801 (Counterclockwise)
Preceding gene: 209551290
Following gene: 209551285
Centisome position: 84.7
GC content: 63.53
Gene sequence:
>669_bases ATGGCAGAGGCTGAATTCGCACGGCCGATCGTAACAGTCGACATCGTCTTGCTGACGCTGCACGAAGGACGGCTATGCGT GGCTTTGCTGGAACGGTCCGCCCAGCCGTTTCTCGGCGTTCCGGCGCTGATCGGCGGCTATCTGCACACCGATGAGGATG CCGATGCGGAGGCGGCGGTGCGGCGCATCCTCAAGGCCAAGGCAGGGCTTGAGGGCATTTTTTTCGAACAGCTCGGCACC TTCGCTTCGGCGCGGCGCGATCCTCGCGACTGGTCGGTGTCGATCGCCTATTTTGCGCTGGTCCCGCAGGGAGCGTTGAA GGGCGCCGCCAACCCCCTGGAATTGCGGCCGGTCGAGGCCGCAGGCGAACTGCCCTTCGACCATCAGGAGATCGTCACCG CCGCGCTGGCGCGGCTGCGCGGCAAGGGCGCCTACTCGACCATTCCGGCAAGGCTGCTTCCCGAGGTCTTCACGATGTCG GAACTGCAGGCAATCTATGAAACGGTGATGGGCGAGCGGCTGGACCAAAGCGCCTTTCGCCGCAAGGTCAATGATCTGGA TCTGCTCGAAGTGGTCGAGGGCGAAAAACGACAGACCGAGCGGGCCCGGCGACCGACGACGCTCTATCGGCTGAAGACGC CGGTCGCTGTGTTCGATCGAAGAATTTGA
Upstream 100 bases:
>100_bases TAGACTTGCAAAGTGCACTTTGCAAGTTGCTATTTGCAAATTGTGTTTTTTTCGATTGGCCGATATGAGATCCCTAGAAA CGCTCACCGGGAAGGCATCG
Downstream 100 bases:
>100_bases GTGGCCGGCGTCCAGAGATCACTCCTGCGCAAGCAATGTCTTTCCCGGGGCAAATTGGCGAGCGGAGAAAATCCGCACTG ACAGAACAACGCCGGCAATC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: DNA Hydrolase; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; NUDIX Domain-Containing Protein; DNA Hydrolase With MutT Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; MutT/Nudix Family DNA Hydrolase; Nudix Superfamily Hydrolase; MutT/NUDIX Family Protein; Nudix Hydrolase Family Protein; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Hydrolase Nudix Family; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAEAEFARPIVTVDIVLLTLHEGRLCVALLERSAQPFLGVPALIGGYLHTDEDADAEAAVRRILKAKAGLEGIFFEQLGT FASARRDPRDWSVSIAYFALVPQGALKGAANPLELRPVEAAGELPFDHQEIVTAALARLRGKGAYSTIPARLLPEVFTMS ELQAIYETVMGERLDQSAFRRKVNDLDLLEVVEGEKRQTERARRPTTLYRLKTPVAVFDRRI
Sequences:
>Translated_222_residues MAEAEFARPIVTVDIVLLTLHEGRLCVALLERSAQPFLGVPALIGGYLHTDEDADAEAAVRRILKAKAGLEGIFFEQLGT FASARRDPRDWSVSIAYFALVPQGALKGAANPLELRPVEAAGELPFDHQEIVTAALARLRGKGAYSTIPARLLPEVFTMS ELQAIYETVMGERLDQSAFRRKVNDLDLLEVVEGEKRQTERARRPTTLYRLKTPVAVFDRRI >Mature_221_residues AEAEFARPIVTVDIVLLTLHEGRLCVALLERSAQPFLGVPALIGGYLHTDEDADAEAAVRRILKAKAGLEGIFFEQLGTF ASARRDPRDWSVSIAYFALVPQGALKGAANPLELRPVEAAGELPFDHQEIVTAALARLRGKGAYSTIPARLLPEVFTMSE LQAIYETVMGERLDQSAFRRKVNDLDLLEVVEGEKRQTERARRPTTLYRLKTPVAVFDRRI
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24612; Mature: 24480
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAEFARPIVTVDIVLLTLHEGRLCVALLERSAQPFLGVPALIGGYLHTDEDADAEAAV CCCCHHHCCHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHH RRILKAKAGLEGIFFEQLGTFASARRDPRDWSVSIAYFALVPQGALKGAANPLELRPVEA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHEECCCCHHHHCCCCCCEECCCCC AGELPFDHQEIVTAALARLRGKGAYSTIPARLLPEVFTMSELQAIYETVMGERLDQSAFR CCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKVNDLDLLEVVEGEKRQTERARRPTTLYRLKTPVAVFDRRI HHCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHCCCC >Mature Secondary Structure AEAEFARPIVTVDIVLLTLHEGRLCVALLERSAQPFLGVPALIGGYLHTDEDADAEAAV CCCHHHCCHHHHHHHEEECCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHH RRILKAKAGLEGIFFEQLGTFASARRDPRDWSVSIAYFALVPQGALKGAANPLELRPVEA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHEECCCCHHHHCCCCCCEECCCCC AGELPFDHQEIVTAALARLRGKGAYSTIPARLLPEVFTMSELQAIYETVMGERLDQSAFR CCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKVNDLDLLEVVEGEKRQTERARRPTTLYRLKTPVAVFDRRI HHCCCHHHHHHHCCHHHHHHHHCCCCEEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA