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The map label for this gene is ycjP [H]

Identifier: 209551239

GI number: 209551239

Start: 3795730

End: 3796620

Strand: Reverse

Name: ycjP [H]

Synonym: Rleg2_3667

Alternate gene names: 209551239

Gene position: 3796620-3795730 (Counterclockwise)

Preceding gene: 209551240

Following gene: 209551238

Centisome position: 83.66

GC content: 59.37

Gene sequence:

>891_bases
ATGAGCACGATTGCCGAGACGGCTCATCGAGGCCAGGCGCGTCGCCGTATGCGCATCGATGGATGGCGGTGGGGCGGACG
CATCTTCCTTGTGTTCATGCTGCTTTATACGGCATTGCCGATGGTCTGGATGCTGATCACCTCGATCAAATCCGGCTTCG
CGGCCATGCAATTCCCGCCGCAATGGTGGCCGGACCAACCCACCCTCGCCAGCTACCAGAAGCTGCTCGATCCGCAAAAC
AGCGTCGGCCAGGACTTCCTGCGCTTCTTCTGGAACAGCCTTTTCGTCTCCACCGCCACGACCATCCTTTCGGTCATCGT
GGCAGTTCCTGCGGCCTACGCGTTTTCACGCTTCACCTTCCCGGGGCGGAACTTTCTTTTCTTCGCCGTCTTGCTCCGCA
ACATGTTTCCGGCAGTGATCTTTCTCGTGCCGCTCTTCATCCTGATGCGGGCAATCGGGCTGGTGAACACGCATGGGTCG
CTCGTCCTTACCTACCTCACATTCGGCCTGCCACTGGCAATCTGGCTGCTCAAGGGTTTCTACGACAATATCCCGGTGCA
GCTCGAGCAGGCGGCACGCATCGACGGGGCAACGCGGTTCCAGGCGTTTTTCCTGATCGTGATGCCGCTCTCGGCGCCAG
GAATCATCGCCACGGCGATCTATTCCTTCATTGGCGCGTGGAACGAGTACATCTACGCCTACACCTTCCTCTCCAAGAAC
GAGCAGTTGACGCTGCCGGTCGGCATCCAGCGCTTCTTCTCGGAAAATACAACGGACTTCCCGGGCCTGATGGCGGCCAG
CTTCATGATGAGCGTGCCCGTCGTGGTCCTGTTCCTCGTTCTTCAACGATACTTCGTACGCGCCCTCACGGAGGGCGCAG
TCAAGCACTAG

Upstream 100 bases:

>100_bases
TGGCATCGGCCTATTCGGTGCTGCTGTTCCTGATCCTGATGTCGCTCGGCTACTTCTACGTCCGTGCGCTGAGCGGCAAC
GAGCAGAAGGACGGGAGCGA

Downstream 100 bases:

>100_bases
GGAGTTGCCGGTGGCGCACGTGGTCCTCAAAGATCTGGTCAAGACCTATGGCGCCTTCAAAGCTGTCAACGATGTTTCGC
TGACGGTCAACGACGGCGAG

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSTIAETAHRGQARRRMRIDGWRWGGRIFLVFMLLYTALPMVWMLITSIKSGFAAMQFPPQWWPDQPTLASYQKLLDPQN
SVGQDFLRFFWNSLFVSTATTILSVIVAVPAAYAFSRFTFPGRNFLFFAVLLRNMFPAVIFLVPLFILMRAIGLVNTHGS
LVLTYLTFGLPLAIWLLKGFYDNIPVQLEQAARIDGATRFQAFFLIVMPLSAPGIIATAIYSFIGAWNEYIYAYTFLSKN
EQLTLPVGIQRFFSENTTDFPGLMAASFMMSVPVVVLFLVLQRYFVRALTEGAVKH

Sequences:

>Translated_296_residues
MSTIAETAHRGQARRRMRIDGWRWGGRIFLVFMLLYTALPMVWMLITSIKSGFAAMQFPPQWWPDQPTLASYQKLLDPQN
SVGQDFLRFFWNSLFVSTATTILSVIVAVPAAYAFSRFTFPGRNFLFFAVLLRNMFPAVIFLVPLFILMRAIGLVNTHGS
LVLTYLTFGLPLAIWLLKGFYDNIPVQLEQAARIDGATRFQAFFLIVMPLSAPGIIATAIYSFIGAWNEYIYAYTFLSKN
EQLTLPVGIQRFFSENTTDFPGLMAASFMMSVPVVVLFLVLQRYFVRALTEGAVKH
>Mature_295_residues
STIAETAHRGQARRRMRIDGWRWGGRIFLVFMLLYTALPMVWMLITSIKSGFAAMQFPPQWWPDQPTLASYQKLLDPQNS
VGQDFLRFFWNSLFVSTATTILSVIVAVPAAYAFSRFTFPGRNFLFFAVLLRNMFPAVIFLVPLFILMRAIGLVNTHGSL
VLTYLTFGLPLAIWLLKGFYDNIPVQLEQAARIDGATRFQAFFLIVMPLSAPGIIATAIYSFIGAWNEYIYAYTFLSKNE
QLTLPVGIQRFFSENTTDFPGLMAASFMMSVPVVVLFLVLQRYFVRALTEGAVKH

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=285, Percent_Identity=35.7894736842105, Blast_Score=161, Evalue=5e-41,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=38.1395348837209, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789860, Length=218, Percent_Identity=29.8165137614679, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33624; Mature: 33493

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIAETAHRGQARRRMRIDGWRWGGRIFLVFMLLYTALPMVWMLITSIKSGFAAMQFPP
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QWWPDQPTLASYQKLLDPQNSVGQDFLRFFWNSLFVSTATTILSVIVAVPAAYAFSRFTF
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGRNFLFFAVLLRNMFPAVIFLVPLFILMRAIGLVNTHGSLVLTYLTFGLPLAIWLLKGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YDNIPVQLEQAARIDGATRFQAFFLIVMPLSAPGIIATAIYSFIGAWNEYIYAYTFLSKN
HCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC
EQLTLPVGIQRFFSENTTDFPGLMAASFMMSVPVVVLFLVLQRYFVRALTEGAVKH
CEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STIAETAHRGQARRRMRIDGWRWGGRIFLVFMLLYTALPMVWMLITSIKSGFAAMQFPP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QWWPDQPTLASYQKLLDPQNSVGQDFLRFFWNSLFVSTATTILSVIVAVPAAYAFSRFTF
CCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PGRNFLFFAVLLRNMFPAVIFLVPLFILMRAIGLVNTHGSLVLTYLTFGLPLAIWLLKGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
YDNIPVQLEQAARIDGATRFQAFFLIVMPLSAPGIIATAIYSFIGAWNEYIYAYTFLSKN
HCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCC
EQLTLPVGIQRFFSENTTDFPGLMAASFMMSVPVVVLFLVLQRYFVRALTEGAVKH
CEEECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]