Click here to switch to the map view.

The map label for this gene is yodB [C]

Identifier: 209551235

GI number: 209551235

Start: 3792089

End: 3792589

Strand: Reverse

Name: yodB [C]

Synonym: Rleg2_3663

Alternate gene names: 209551235

Gene position: 3792589-3792089 (Counterclockwise)

Preceding gene: 209551236

Following gene: 209551232

Centisome position: 83.57

GC content: 58.88

Gene sequence:

>501_bases
ATGCAGCAGCCGTCCACCATGGCTTACAGCCTCAATCAACGCTTCCTGCATTGGACGATCGCATTGTTGATCTTCTTCAA
TCTGCTGTTTCCCGACGGCATGAATGTCTGGCATCGGCTGATGCGCAGGGGCGAGGTGCCGACGCCGGAGCAGGTTGCGT
CGGCGAATATCCATGCCTATGTCGGCATCGCCATTCTTCTGCTTGCGATCATACGGCTCGGACTGCGTTTTACCAAAGGC
GTGCCGGACGAGGTGGCGGAGGAGCCGGCGATCTTCCGTCTTGCGGCAAAGCTTGCCCATGCCGGTCTGTACATTCTGAT
CTTCGCCATGCCGCTTACGGGCATCGCCGCCTACTATTTCGGCATCAATCCCGCCGGGTCGTTCCACGCGGAAGTCCTGA
AGATCATTCTCTGGGCGCTGATCGCGGCGCATGTCGCTGGCGCGCTCGTCCATCAGTTCTATTGGAAAACCAATGTGCTG
CGCCGGATGACGCTCGGCTGA

Upstream 100 bases:

>100_bases
AGTGGCGCAAAACAAACCGCTTGGGAACCACTTAGCCATGGATTACCCTTAGTCTGGTGTTCTGAATCGCAGCGATAAAC
ATTTGACGAAGGTCGAGAAA

Downstream 100 bases:

>100_bases
GCGCCTGGTCGGTTCAGTTCACCGCCGTCACCGTAAAACCTTGCTGGCGCAGCAGTTCGATGACGCCGGCCTTGCCGGGC
AGGTGCAGGGCGCCGACCGC

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Transmembrane Cytochrome B

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQQPSTMAYSLNQRFLHWTIALLIFFNLLFPDGMNVWHRLMRRGEVPTPEQVASANIHAYVGIAILLLAIIRLGLRFTKG
VPDEVAEEPAIFRLAAKLAHAGLYILIFAMPLTGIAAYYFGINPAGSFHAEVLKIILWALIAAHVAGALVHQFYWKTNVL
RRMTLG

Sequences:

>Translated_166_residues
MQQPSTMAYSLNQRFLHWTIALLIFFNLLFPDGMNVWHRLMRRGEVPTPEQVASANIHAYVGIAILLLAIIRLGLRFTKG
VPDEVAEEPAIFRLAAKLAHAGLYILIFAMPLTGIAAYYFGINPAGSFHAEVLKIILWALIAAHVAGALVHQFYWKTNVL
RRMTLG
>Mature_166_residues
MQQPSTMAYSLNQRFLHWTIALLIFFNLLFPDGMNVWHRLMRRGEVPTPEQVASANIHAYVGIAILLLAIIRLGLRFTKG
VPDEVAEEPAIFRLAAKLAHAGLYILIFAMPLTGIAAYYFGINPAGSFHAEVLKIILWALIAAHVAGALVHQFYWKTNVL
RRMTLG

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18596; Mature: 18596

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPSTMAYSLNQRFLHWTIALLIFFNLLFPDGMNVWHRLMRRGEVPTPEQVASANIHAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHH
VGIAILLLAIIRLGLRFTKGVPDEVAEEPAIFRLAAKLAHAGLYILIFAMPLTGIAAYYF
HHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GINPAGSFHAEVLKIILWALIAAHVAGALVHQFYWKTNVLRRMTLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQPSTMAYSLNQRFLHWTIALLIFFNLLFPDGMNVWHRLMRRGEVPTPEQVASANIHAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCHHHH
VGIAILLLAIIRLGLRFTKGVPDEVAEEPAIFRLAAKLAHAGLYILIFAMPLTGIAAYYF
HHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GINPAGSFHAEVLKIILWALIAAHVAGALVHQFYWKTNVLRRMTLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA