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The map label for this gene is atpH [H]

Identifier: 209551227

GI number: 209551227

Start: 3783700

End: 3784266

Strand: Reverse

Name: atpH [H]

Synonym: Rleg2_3655

Alternate gene names: 209551227

Gene position: 3784266-3783700 (Counterclockwise)

Preceding gene: 209551228

Following gene: 209551226

Centisome position: 83.39

GC content: 59.08

Gene sequence:

>567_bases
GTGCCAGTGGCAGACACGTCCCAGCTTACATCTGGTGTTGCCGAGCGCTATGCCTCGTCGCTTTTCGATCTGGCGCTCGA
GCAGGGCGCCGTTGACAGCGTAACCGCCGATCTTGACCGTTTCCAGGCAATGCTGGATGAGAGCGCCGATCTGAAGCGCT
TCGTCGCAAGCCCGGTTTTCTCTGCCGAGGACCAGCTGAAGGCGATCGTCGCCATCAGCGAGAAGGCCGGAATCAGCGGC
TTCTTCGCCAATTTCCTGAAGGTCGTGGCGCGCAACCGCCGCCTGTTCGCCCTGCCGGGCATGATCAAGGCCTTCCGCAT
CATCGCCGCGAACCATCGCGGTGAAATCTCCGCCGAGGTCACCTCGGCGCATGCGCTTTCGCAAGCGCAGGAAACCGAAT
TGAAGGTGGCACTCAAGAGCGTTACCGGCAAAGACGTGACGATTGCCGTCACGGTTGATCCGTCAATTCTTGGTGGTCTG
ATCGTCAAGGTCGGGTCCCGCCAGATTGATACGTCTCTTCGTACCAAACTCTCCACTCTTAAGCTCGCATTGAAAGAGGT
TGGCTGA

Upstream 100 bases:

>100_bases
AGGCTTCTCTTGTGGTTTCTGGGGGAAATCAAAACGAATTCAAGATCATAGGTTCGGCGTCCGCCGAGAGCCGGATTTTG
GGTTGAAATCAGGGAAATTT

Downstream 100 bases:

>100_bases
TGGATATCCGCGCCGCGGAAATTTCCGCAATTCTCAAAGACCAGATCAAAAATTTCGGCAAAGAGGCAGAAGTCTCGGAA
GTCGGCCAGGTTCTCTCCGT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPVADTSQLTSGVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVFSAEDQLKAIVAISEKAGISG
FFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQAQETELKVALKSVTGKDVTIAVTVDPSILGGL
IVKVGSRQIDTSLRTKLSTLKLALKEVG

Sequences:

>Translated_188_residues
MPVADTSQLTSGVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVFSAEDQLKAIVAISEKAGISG
FFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQAQETELKVALKSVTGKDVTIAVTVDPSILGGL
IVKVGSRQIDTSLRTKLSTLKLALKEVG
>Mature_187_residues
PVADTSQLTSGVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVFSAEDQLKAIVAISEKAGISGF
FANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQAQETELKVALKSVTGKDVTIAVTVDPSILGGLI
VKVGSRQIDTSLRTKLSTLKLALKEVG

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Homo sapiens, GI4502303, Length=178, Percent_Identity=33.7078651685393, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI1790173, Length=174, Percent_Identity=28.735632183908, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71984710, Length=175, Percent_Identity=34.8571428571429, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71984717, Length=175, Percent_Identity=34.8571428571429, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320504, Length=180, Percent_Identity=28.3333333333333, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24647054, Length=168, Percent_Identity=36.3095238095238, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24647056, Length=107, Percent_Identity=41.1214953271028, Blast_Score=78, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20019; Mature: 19888

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVADTSQLTSGVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
SAEDQLKAIVAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHHH
TSAHALSQAQETELKVALKSVTGKDVTIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHH
KLALKEVG
HHHHHHCC
>Mature Secondary Structure 
PVADTSQLTSGVAERYASSLFDLALEQGAVDSVTADLDRFQAMLDESADLKRFVASPVF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
SAEDQLKAIVAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHHH
TSAHALSQAQETELKVALKSVTGKDVTIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHH
KLALKEVG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA