| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yhjX [H]
Identifier: 209551207
GI number: 209551207
Start: 3762627
End: 3764285
Strand: Reverse
Name: yhjX [H]
Synonym: Rleg2_3633
Alternate gene names: 209551207
Gene position: 3764285-3762627 (Counterclockwise)
Preceding gene: 209551208
Following gene: 209551202
Centisome position: 82.95
GC content: 64.26
Gene sequence:
>1659_bases ATGACTGCAGCGGAAACACGTACAGACGGAGCGGTGACAGGCTCGGGCCTGCTCGAACGTGAAAGGATCGTCGCAAGACC CGGTTTCAACAGGTGGCTGGTCCCGCCGGCCGCGCTCGCCATCCATCTCTGCATCGGCATGGCATATGGTTTCAGCGTCT TCTGGCTGCCGCTTTCCAAGTCGCTCGGGATCACCGCCTCGACCGCTTGCCCCGATCTGACGCTCGCCTCGGCGCTGTTC ACCACCACCTGCGACTGGCGTGTTGCCGACCTCGGCTGGATCTATACGCTGTTCTTCGTCCTGCTTGGCTCGTCCGCCGC CATTTGGGGCGGCTGGCTCGAGCGGGCGGGTCCGCGCAAGGCAGGCGTCGTTTCCGCCTGCTGCTGGTGCGGCGGCATCG TGCTTGCTGCCGTCGGCGTCATGACCCATCAGCTCTGGCTGATGTGGCTCGGCGCCGGCGTCATCGGCGGCATCGGTCTC GGCCTCGGCTACATCTCGCCGGTCTCGACGCTGATCAAATGGTTTCCCGACCGGCGCGGCATGGCGACCGGCATGGCGAT CATGGGCTTCGGCGGCGGCGCGATGATCGGCGCTCCGCTTGCCAACCTGCTGATGAATACCTTCAAGACCGATGCCTCGG TCGGGGTCTGGCAGACCTTCATCGTCATGGCGGCGATCTATTTCGTCTTCATGATGGGCGGCGCCTTTGGCTATCGCATT CCGCCGGCCGGCTGGCGGCCGGAAGGCTGGACGCCGCCCGCGGCCAAGAGCACGATGATCACGACCAGACATGTGCATCT GCGCGATGCCCACAAGACCAAGCAGTTCTGGCTGATCTGGGCGGTGCTCTGCCTCAACGTTTCGGCCGGCATCGGGGTTC TCGGCATGGCTTCACCGATGCTGCAGGAAATCTTCGCCGGCTCGCTGATCGGCCTGCCGGATGTCGGTTTCGCCCAGCTC GACGCCGGCCAGAAGGCGTCGATCGCCACGATCGCCGCGGGTTTTGCCGGCTTGCTGTCGCTCTTCAATATCGGCGGGCG GTTCTTCTGGGCGTCGCTCTCCGACAAGATCGGCCGCAAGAACACCTATTACTGCTTCTTCATCATCGGCATCGCGCTTT ATGCGCTGGCGCCGAGCCTCGCCGGAATGGGCAACAAGGCGCTGTTCGTTCTCGCCTTCGGCGTCATTCTGTCGATGTAT GGCGGTGGTTTTTCGACGATCCCGGCCTATCTCGCCGATATTTTCGGCACGCAATTCGTCGGCGCCATCCATGGGCGGCT ACTGACGGCCTGGGCAACGGCCGGCATCGTCGGTCCCGTCGTCGTCAACTATATCCGCGAAGCGCAGATCGCCGCCGGTG TTGCGCCGGGTCCGAGCCTTTATACCGGCACCATGTATATTCTCGCCGGCATGCTGGCCCTCGGCCTTGTTGCCAATTCA CTGATCAGGCCGCTTTCGGACAAATGGTTCATGTCCGATGGTGAGGTCGCGGCGCTGCAGGCGAAGTCGGCGGCCGTCAA TGCCGGGCCGACCGGCTCCTTCGGCATCGGCACGGGTGGGCTGGACGCCAAGGCGATGCTTGCCTGGGCCGTCGTCGGCA TTCCGCTGCTCTGGGGTGTCTGGGTAACGCTGAAGGCGACCTTCGCGCTGTTCGGGTGA
Upstream 100 bases:
>100_bases AAACCAAGCGGAAATTTAAAGTGTTACATCGTCCTTTGCGCTCCTGAAAAGTCGGCAGCGCTCCAATCACAGCAAGGTCT GAAACAAGGAGGAGTTGTTC
Downstream 100 bases:
>100_bases GATATCAAAGCGCGCCGCATGGGCCTCATGCGGCGCGCTTCTTCCTCGCTACGCAGAAACAATCGCGAGCTATGGGGCGT GGCTCAGAACTCTTCCCAGC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MTAAETRTDGAVTGSGLLERERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKSLGITASTACPDLTLASALF TTTCDWRVADLGWIYTLFFVLLGSSAAIWGGWLERAGPRKAGVVSACCWCGGIVLAAVGVMTHQLWLMWLGAGVIGGIGL GLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNTFKTDASVGVWQTFIVMAAIYFVFMMGGAFGYRI PPAGWRPEGWTPPAAKSTMITTRHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPMLQEIFAGSLIGLPDVGFAQL DAGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRKNTYYCFFIIGIALYALAPSLAGMGNKALFVLAFGVILSMY GGGFSTIPAYLADIFGTQFVGAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPSLYTGTMYILAGMLALGLVANS LIRPLSDKWFMSDGEVAALQAKSAAVNAGPTGSFGIGTGGLDAKAMLAWAVVGIPLLWGVWVTLKATFALFG
Sequences:
>Translated_552_residues MTAAETRTDGAVTGSGLLERERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKSLGITASTACPDLTLASALF TTTCDWRVADLGWIYTLFFVLLGSSAAIWGGWLERAGPRKAGVVSACCWCGGIVLAAVGVMTHQLWLMWLGAGVIGGIGL GLGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNTFKTDASVGVWQTFIVMAAIYFVFMMGGAFGYRI PPAGWRPEGWTPPAAKSTMITTRHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPMLQEIFAGSLIGLPDVGFAQL DAGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRKNTYYCFFIIGIALYALAPSLAGMGNKALFVLAFGVILSMY GGGFSTIPAYLADIFGTQFVGAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPSLYTGTMYILAGMLALGLVANS LIRPLSDKWFMSDGEVAALQAKSAAVNAGPTGSFGIGTGGLDAKAMLAWAVVGIPLLWGVWVTLKATFALFG >Mature_551_residues TAAETRTDGAVTGSGLLERERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSKSLGITASTACPDLTLASALFT TTCDWRVADLGWIYTLFFVLLGSSAAIWGGWLERAGPRKAGVVSACCWCGGIVLAAVGVMTHQLWLMWLGAGVIGGIGLG LGYISPVSTLIKWFPDRRGMATGMAIMGFGGGAMIGAPLANLLMNTFKTDASVGVWQTFIVMAAIYFVFMMGGAFGYRIP PAGWRPEGWTPPAAKSTMITTRHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPMLQEIFAGSLIGLPDVGFAQLD AGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRKNTYYCFFIIGIALYALAPSLAGMGNKALFVLAFGVILSMYG GGFSTIPAYLADIFGTQFVGAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPSLYTGTMYILAGMLALGLVANSL IRPLSDKWFMSDGEVAALQAKSAAVNAGPTGSFGIGTGGLDAKAMLAWAVVGIPLLWGVWVTLKATFALFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=414, Percent_Identity=23.1884057971014, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 57987; Mature: 57856
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAETRTDGAVTGSGLLERERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCC SLGITASTACPDLTLASALFTTTCDWRVADLGWIYTLFFVLLGSSAAIWGGWLERAGPRK CCCCEECCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AGVVSACCWCGGIVLAAVGVMTHQLWLMWLGAGVIGGIGLGLGYISPVSTLIKWFPDRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MATGMAIMGFGGGAMIGAPLANLLMNTFKTDASVGVWQTFIVMAAIYFVFMMGGAFGYRI CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PPAGWRPEGWTPPAAKSTMITTRHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPM CCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHH LQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRK HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC NTYYCFFIIGIALYALAPSLAGMGNKALFVLAFGVILSMYGGGFSTIPAYLADIFGTQFV CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPSLYTGTMYILAGMLALGLVANS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LIRPLSDKWFMSDGEVAALQAKSAAVNAGPTGSFGIGTGGLDAKAMLAWAVVGIPLLWGV HHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WVTLKATFALFG HHHHHHHHHHCC >Mature Secondary Structure TAAETRTDGAVTGSGLLERERIVARPGFNRWLVPPAALAIHLCIGMAYGFSVFWLPLSK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCC SLGITASTACPDLTLASALFTTTCDWRVADLGWIYTLFFVLLGSSAAIWGGWLERAGPRK CCCCEECCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC AGVVSACCWCGGIVLAAVGVMTHQLWLMWLGAGVIGGIGLGLGYISPVSTLIKWFPDRRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MATGMAIMGFGGGAMIGAPLANLLMNTFKTDASVGVWQTFIVMAAIYFVFMMGGAFGYRI CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC PPAGWRPEGWTPPAAKSTMITTRHVHLRDAHKTKQFWLIWAVLCLNVSAGIGVLGMASPM CCCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCHHH LQEIFAGSLIGLPDVGFAQLDAGQKASIATIAAGFAGLLSLFNIGGRFFWASLSDKIGRK HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC NTYYCFFIIGIALYALAPSLAGMGNKALFVLAFGVILSMYGGGFSTIPAYLADIFGTQFV CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GAIHGRLLTAWATAGIVGPVVVNYIREAQIAAGVAPGPSLYTGTMYILAGMLALGLVANS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LIRPLSDKWFMSDGEVAALQAKSAAVNAGPTGSFGIGTGGLDAKAMLAWAVVGIPLLWGV HHHHCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WVTLKATFALFG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]