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The map label for this gene is msrB [H]

Identifier: 209551080

GI number: 209551080

Start: 3622968

End: 3623450

Strand: Reverse

Name: msrB [H]

Synonym: Rleg2_3504

Alternate gene names: 209551080

Gene position: 3623450-3622968 (Counterclockwise)

Preceding gene: 209551091

Following gene: 209551077

Centisome position: 79.85

GC content: 61.49

Gene sequence:

>483_bases
ATGTTAAACAGACGATTGTTGCTGATGGGTGCCGCTTTCGGCGGGCTTGCGGTTCGCTTGGGGGCCGGCAAGGCGATCGC
AGGCGAGACGTTTGCGGTGACGCACACAGAGGATGAATGGCGCAAGCTGCTGACGCCGGATCAGTTTGTCATCCTGCGTC
AGGCGGGGACGGAAAATCCCTTCACCAGCGCCCTGCTGCATGAGGAGCGGAAGGGCATCTTCGCCTGTGTCGGCTGCGAC
CAAAAGCTCTTTTCCTCGGCGACCAAATTCGACAGCGGCACCGGCTGGCCGAGCTTTTGGGCACCGCTCGACCATGCGGT
CGGCACCACAAACGACACGACTTTCGGGATGGCGCGCACGGCCGTCCATTGCGGCCGCTGTGGCGGCCATCTCGGCCATG
TCTTCGATGATGGTCCGAAGCCAACCGGACTTCGCTACTGCATGAATGGGCTTGTCATGACGTTTCATCCAGCCTCGGCC
TGA

Upstream 100 bases:

>100_bases
AATCACATTTCAGTGTTCGAACACCGACTGTGTAACAAAAGACCGCTCTCGCCCGTAGTTCTGTGCAGAAACAGCTTTGC
AGGGCGAGGAGATCCCGACC

Downstream 100 bases:

>100_bases
TTCAGGGAAGGTCCTGTTTGTCGTTCAGTGCCGGCGAGCGCCCGTATCCGTGCAGCCAAGCCTCAATGCCGCGCGCAGCG
GCCCGGCCGGTCGCAAGGCA

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNRRLLLMGAAFGGLAVRLGAGKAIAGETFAVTHTEDEWRKLLTPDQFVILRQAGTENPFTSALLHEERKGIFACVGCD
QKLFSSATKFDSGTGWPSFWAPLDHAVGTTNDTTFGMARTAVHCGRCGGHLGHVFDDGPKPTGLRYCMNGLVMTFHPASA

Sequences:

>Translated_160_residues
MLNRRLLLMGAAFGGLAVRLGAGKAIAGETFAVTHTEDEWRKLLTPDQFVILRQAGTENPFTSALLHEERKGIFACVGCD
QKLFSSATKFDSGTGWPSFWAPLDHAVGTTNDTTFGMARTAVHCGRCGGHLGHVFDDGPKPTGLRYCMNGLVMTFHPASA
>Mature_160_residues
MLNRRLLLMGAAFGGLAVRLGAGKAIAGETFAVTHTEDEWRKLLTPDQFVILRQAGTENPFTSALLHEERKGIFACVGCD
QKLFSSATKFDSGTGWPSFWAPLDHAVGTTNDTTFGMARTAVHCGRCGGHLGHVFDDGPKPTGLRYCMNGLVMTFHPASA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=145, Percent_Identity=43.448275862069, Blast_Score=134, Evalue=3e-32,
Organism=Homo sapiens, GI301336162, Length=145, Percent_Identity=43.448275862069, Blast_Score=134, Evalue=3e-32,
Organism=Homo sapiens, GI73089054, Length=145, Percent_Identity=43.448275862069, Blast_Score=134, Evalue=3e-32,
Organism=Homo sapiens, GI37620216, Length=129, Percent_Identity=46.5116279069767, Blast_Score=133, Evalue=6e-32,
Organism=Homo sapiens, GI117606353, Length=133, Percent_Identity=45.8646616541353, Blast_Score=125, Evalue=2e-29,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=47.8991596638655, Blast_Score=130, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17553450, Length=121, Percent_Identity=41.3223140495868, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI115532676, Length=120, Percent_Identity=41.6666666666667, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319816, Length=124, Percent_Identity=39.5161290322581, Blast_Score=100, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24645799, Length=137, Percent_Identity=44.5255474452555, Blast_Score=127, Evalue=4e-30,
Organism=Drosophila melanogaster, GI221378662, Length=139, Percent_Identity=42.4460431654676, Blast_Score=127, Evalue=5e-30,
Organism=Drosophila melanogaster, GI221378664, Length=132, Percent_Identity=45.4545454545455, Blast_Score=125, Evalue=8e-30,
Organism=Drosophila melanogaster, GI45553335, Length=125, Percent_Identity=48, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356369, Length=125, Percent_Identity=48, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24645801, Length=148, Percent_Identity=41.2162162162162, Blast_Score=122, Evalue=9e-29,
Organism=Drosophila melanogaster, GI24645804, Length=141, Percent_Identity=42.5531914893617, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 17213; Mature: 17213

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRRLLLMGAAFGGLAVRLGAGKAIAGETFAVTHTEDEWRKLLTPDQFVILRQAGTENP
CCCCEEEEEECCCCCEEEEECCCCEECCCEEEEEECHHHHHHHCCCCEEEEEECCCCCCC
FTSALLHEERKGIFACVGCDQKLFSSATKFDSGTGWPSFWAPLDHAVGTTNDTTFGMART
HHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHHH
AVHCGRCGGHLGHVFDDGPKPTGLRYCMNGLVMTFHPASA
HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCC
>Mature Secondary Structure
MLNRRLLLMGAAFGGLAVRLGAGKAIAGETFAVTHTEDEWRKLLTPDQFVILRQAGTENP
CCCCEEEEEECCCCCEEEEECCCCEECCCEEEEEECHHHHHHHCCCCEEEEEECCCCCCC
FTSALLHEERKGIFACVGCDQKLFSSATKFDSGTGWPSFWAPLDHAVGTTNDTTFGMART
HHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCCCCHHHHHH
AVHCGRCGGHLGHVFDDGPKPTGLRYCMNGLVMTFHPASA
HHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA