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The map label for this gene is bphR [H]

Identifier: 209551035

GI number: 209551035

Start: 3575229

End: 3575966

Strand: Direct

Name: bphR [H]

Synonym: Rleg2_3459

Alternate gene names: 209551035

Gene position: 3575229-3575966 (Clockwise)

Preceding gene: 209551029

Following gene: 209551036

Centisome position: 78.79

GC content: 60.03

Gene sequence:

>738_bases
ATGGACTCGAGCGACGACAGCGCCCATGGCGCGCCGACAGAAGAAGATGCGCCGTCCGCTACCTTCGCCGACGATGGAAA
AAACACCATCGGCAGCCAGCTCGCATCCCGTCTTCGAGAGGCGATCATTTCCGGTGAACTGGAGGCGGGCAGCAAAATCA
ATCTCGACAAGGCCCGAAAGACGTTCAATGTCAGCCTCAGCCCGTTGCGCGAAGGCCTGGCGCGACTCATTTCCGACGGC
CTGGTTGAGTTTCAGGACAATCGAGGCTATCGCGTCGCCCCGATCTCGCTTGCCAATCTCGAAGAAGTTACGACCCTTCG
GGAGGAACTCGAGGTCTTCGCACTGCGCGAATCCATTCGCATCGGCGACGTCGAGTGGGAGGGCAACATCATGCGTGCGC
TCCATCGCCTGAACCGAACCGAGCGCGACGCCGCCCGTCCCGAAACGCTGGAACACTGGGAAGCGCTGCACCGAGAATTC
CACCTCACCCTGATCTCAGGCTGTGGCAAGCCTCTACTTCTCCACTTTTGCAATCTTCTGCTGAATCTCAACGACCGATA
CCGCCGCGCCTTCCTCATCCGCACATCCGGGGACCGCAACGTAGGCCAGGAGCACAGCGAGATTGCGCAGGGCGCCGTGG
CACGCGACGTTGAATATGCCTGCGAGAAGCTGCGCCAGCACATCCACCGGACCGGGACCAATCTTCGAAATCATCTTGCG
ACGAAAGGTGTCGTATGA

Upstream 100 bases:

>100_bases
CTCCAGGAAACTTGGCCGCAATCCCTGACGACGAGTTGACATAAATAATCGTTTATTATATCGATCATCGAAAGTTGAGC
CGGATTGCCTGGGAGGAGTG

Downstream 100 bases:

>100_bases
TGGCCGCCTCAACATCAAAGTCGCCCGTCCCGATCGGCGTGGCGCACTTCTCGTCTATAATGCTGCCCCCCGCGGAGTTC
GCGAAGATTGCCAGACGGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDSSDDSAHGAPTEEDAPSATFADDGKNTIGSQLASRLREAIISGELEAGSKINLDKARKTFNVSLSPLREGLARLISDG
LVEFQDNRGYRVAPISLANLEEVTTLREELEVFALRESIRIGDVEWEGNIMRALHRLNRTERDAARPETLEHWEALHREF
HLTLISGCGKPLLLHFCNLLLNLNDRYRRAFLIRTSGDRNVGQEHSEIAQGAVARDVEYACEKLRQHIHRTGTNLRNHLA
TKGVV

Sequences:

>Translated_245_residues
MDSSDDSAHGAPTEEDAPSATFADDGKNTIGSQLASRLREAIISGELEAGSKINLDKARKTFNVSLSPLREGLARLISDG
LVEFQDNRGYRVAPISLANLEEVTTLREELEVFALRESIRIGDVEWEGNIMRALHRLNRTERDAARPETLEHWEALHREF
HLTLISGCGKPLLLHFCNLLLNLNDRYRRAFLIRTSGDRNVGQEHSEIAQGAVARDVEYACEKLRQHIHRTGTNLRNHLA
TKGVV
>Mature_245_residues
MDSSDDSAHGAPTEEDAPSATFADDGKNTIGSQLASRLREAIISGELEAGSKINLDKARKTFNVSLSPLREGLARLISDG
LVEFQDNRGYRVAPISLANLEEVTTLREELEVFALRESIRIGDVEWEGNIMRALHRLNRTERDAARPETLEHWEALHREF
HLTLISGCGKPLLLHFCNLLLNLNDRYRRAFLIRTSGDRNVGQEHSEIAQGAVARDVEYACEKLRQHIHRTGTNLRNHLA
TKGVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=195, Percent_Identity=29.7435897435897, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27454; Mature: 27454

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSDDSAHGAPTEEDAPSATFADDGKNTIGSQLASRLREAIISGELEAGSKINLDKARK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
TFNVSLSPLREGLARLISDGLVEFQDNRGYRVAPISLANLEEVTTLREELEVFALRESIR
HHCCCHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCE
IGDVEWEGNIMRALHRLNRTERDAARPETLEHWEALHREFHLTLISGCGKPLLLHFCNLL
ECCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LNLNDRYRRAFLIRTSGDRNVGQEHSEIAQGAVARDVEYACEKLRQHIHRTGTNLRNHLA
HCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TKGVV
HCCCC
>Mature Secondary Structure
MDSSDDSAHGAPTEEDAPSATFADDGKNTIGSQLASRLREAIISGELEAGSKINLDKARK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
TFNVSLSPLREGLARLISDGLVEFQDNRGYRVAPISLANLEEVTTLREELEVFALRESIR
HHCCCHHHHHHHHHHHHHHCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCE
IGDVEWEGNIMRALHRLNRTERDAARPETLEHWEALHREFHLTLISGCGKPLLLHFCNLL
ECCCCCCCHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LNLNDRYRRAFLIRTSGDRNVGQEHSEIAQGAVARDVEYACEKLRQHIHRTGTNLRNHLA
HCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TKGVV
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]