| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is gltX [H]
Identifier: 209550995
GI number: 209550995
Start: 3534985
End: 3536439
Strand: Direct
Name: gltX [H]
Synonym: Rleg2_3419
Alternate gene names: 209550995
Gene position: 3534985-3536439 (Clockwise)
Preceding gene: 209550994
Following gene: 209550996
Centisome position: 77.9
GC content: 61.79
Gene sequence:
>1455_bases ATGACAACTTCCGGCGTCCGCGTCCGCATCGCTCCCTCGCCGACCGGCGAGCCGCATGTCGGCACCGCTTACATCGCTCT CTTCAACTACCTTTTCGCCAAGAAGCACGGCGGCGAGTTCATCTTGCGCATCGAGGATACCGACGCGACGCGCTCGACCC CGGAATTCGAGACCAAGGTATTGGACGCCTTGAAATGGTGCGGGCTGGAATGGAAGGAAGGCCCCGATATCGGCGGTCCC TACGGCCCCTATCGCCAGTCCGACCGCAAGCCGATGTACCAGCCTTACGCTGAGGAGCTGCTGGACAAGGGCCATGCCTT CCGCTGTTTCTGCACGCCCGCGCGTCTCGAACAGATGCGCGAGGCGCAGCGCGCCGCCGGCAAGCCGCCGAAATATGACG GGCTCTGCCTCAGCCTGACGGCAGAGGAAGTGACCTCGCGCATGGCAGCCGGCGAGACGACCGTCATCCGCATGAAGATC CCGGCTGAAGGCTCCTGCGACTTCACCGACGGCGTCTACGGCGATGTCTCCATCCCCTGGGATTCCGTCGACATGCAGGT GCTGATCAAGGCCGACGGCATGCCGACCTATCACATGGCCAACGTCATCGACGACCATCTGATGAAGATCACCCATGTGG CGCGCGGCGAGGAATGGCTGGCTTCGGTGCCGAAGCACATCCTGCTCTATCGCTATTTCGGCTGGGACCAGCCGGTCTTC ATGCATCTGTCGCTGATGCGCAATGCCGACAAGTCGAAGCTGTCGAAGCGCAAGAACCCGACCTCGATCTCCTATTATTC TGCGCTCGGTTATATCCCCGAAGCGCTGATGAATTTTCTCGGCCTGTTCTTCATCCAGATCGCCGAAGGCGAAGAGCTGT TGACGATGGAGGAGCTCTCCGCGAAGTTCGATCCGGAGAACCTCTCCAAGGCCGGCGCGATCTTCGACATCCAGAAACTC GACTGGCTGAACGGCCGCTGGATCCGCGAGAAGCTCTCCGAGGAAGAATTCCAGGCGCGTGTGCTCGCCTGGGCGATGGA AAACGATCGTTTGAAGGCGGGTCTCCGCCTGTCGCAGACGCGCATTTCCAAGCTCGGCGAACTGCCCGATCTGGCCGGCT TCCTGCTGAAGTCCGATCTCGGCCTGCAGCCGTCCGACTTCGCCAAGATCAAGTCTCCGCCGGAAGAGATCCTGGAGATC CTCAACACCGTTCAGCCGGATCTGGAAAAGATCCTGGAATGGAATGTCGAGACGATCGAGGCAGAGCTGCGCGCCATCGC CGACCGCATGGGCAAGAAGCTGAAGGTCGTGGTCTCGCCGCTCTTCGTCGCCGTATCAGGCTCGTCGCGTTCGCTGCCGC TCTTCGATTCCATGGCGATCCTCGGCCGCTCCGTCGTGCGCCAGCGCCTGAAGCTCGCAGCCCAGGCCGTCGCCGCCCTC GTCGGCTCGAAATAA
Upstream 100 bases:
>100_bases GCCCTTTTTCGGCCGGTTTGCCGATGAAGATATCTGCATCCTTCGGCCGAACGTCGCTTTCCCCGGAAAGCCGTCCGGCG TTCATTGACGGGCCATACCA
Downstream 100 bases:
>100_bases TAGTGGGAGCCCCTCCCCCTTGTGGGGAGGGGTTGGGGAGGGGCCTTTTCCAGAAAACCCCTCCCCTCCGCTTCGCTCCG ACCCTCCCCACAAGGAGAGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MTTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFETKVLDALKWCGLEWKEGPDIGGP YGPYRQSDRKPMYQPYAEELLDKGHAFRCFCTPARLEQMREAQRAAGKPPKYDGLCLSLTAEEVTSRMAAGETTVIRMKI PAEGSCDFTDGVYGDVSIPWDSVDMQVLIKADGMPTYHMANVIDDHLMKITHVARGEEWLASVPKHILLYRYFGWDQPVF MHLSLMRNADKSKLSKRKNPTSISYYSALGYIPEALMNFLGLFFIQIAEGEELLTMEELSAKFDPENLSKAGAIFDIQKL DWLNGRWIREKLSEEEFQARVLAWAMENDRLKAGLRLSQTRISKLGELPDLAGFLLKSDLGLQPSDFAKIKSPPEEILEI LNTVQPDLEKILEWNVETIEAELRAIADRMGKKLKVVVSPLFVAVSGSSRSLPLFDSMAILGRSVVRQRLKLAAQAVAAL VGSK
Sequences:
>Translated_484_residues MTTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFETKVLDALKWCGLEWKEGPDIGGP YGPYRQSDRKPMYQPYAEELLDKGHAFRCFCTPARLEQMREAQRAAGKPPKYDGLCLSLTAEEVTSRMAAGETTVIRMKI PAEGSCDFTDGVYGDVSIPWDSVDMQVLIKADGMPTYHMANVIDDHLMKITHVARGEEWLASVPKHILLYRYFGWDQPVF MHLSLMRNADKSKLSKRKNPTSISYYSALGYIPEALMNFLGLFFIQIAEGEELLTMEELSAKFDPENLSKAGAIFDIQKL DWLNGRWIREKLSEEEFQARVLAWAMENDRLKAGLRLSQTRISKLGELPDLAGFLLKSDLGLQPSDFAKIKSPPEEILEI LNTVQPDLEKILEWNVETIEAELRAIADRMGKKLKVVVSPLFVAVSGSSRSLPLFDSMAILGRSVVRQRLKLAAQAVAAL VGSK >Mature_483_residues TTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFETKVLDALKWCGLEWKEGPDIGGPY GPYRQSDRKPMYQPYAEELLDKGHAFRCFCTPARLEQMREAQRAAGKPPKYDGLCLSLTAEEVTSRMAAGETTVIRMKIP AEGSCDFTDGVYGDVSIPWDSVDMQVLIKADGMPTYHMANVIDDHLMKITHVARGEEWLASVPKHILLYRYFGWDQPVFM HLSLMRNADKSKLSKRKNPTSISYYSALGYIPEALMNFLGLFFIQIAEGEELLTMEELSAKFDPENLSKAGAIFDIQKLD WLNGRWIREKLSEEEFQARVLAWAMENDRLKAGLRLSQTRISKLGELPDLAGFLLKSDLGLQPSDFAKIKSPPEEILEIL NTVQPDLEKILEWNVETIEAELRAIADRMGKKLKVVVSPLFVAVSGSSRSLPLFDSMAILGRSVVRQRLKLAAQAVAALV GSK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=499, Percent_Identity=34.4689378757515, Blast_Score=270, Evalue=2e-72, Organism=Escherichia coli, GI1788743, Length=481, Percent_Identity=33.8877338877339, Blast_Score=271, Evalue=5e-74, Organism=Escherichia coli, GI226510925, Length=264, Percent_Identity=30.3030303030303, Blast_Score=113, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71993394, Length=484, Percent_Identity=35.3305785123967, Blast_Score=278, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6324540, Length=341, Percent_Identity=41.3489736070381, Blast_Score=258, Evalue=2e-69, Organism=Drosophila melanogaster, GI24665321, Length=491, Percent_Identity=38.0855397148676, Blast_Score=298, Evalue=8e-81,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 54238; Mature: 54107
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFETKV CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHH LDALKWCGLEWKEGPDIGGPYGPYRQSDRKPMYQPYAEELLDKGHAFRCFCTPARLEQMR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHH EAQRAAGKPPKYDGLCLSLTAEEVTSRMAAGETTVIRMKIPAEGSCDFTDGVYGDVSIPW HHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC DSVDMQVLIKADGMPTYHMANVIDDHLMKITHVARGEEWLASVPKHILLYRYFGWDQPVF CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEHHHCCCCCHHH MHLSLMRNADKSKLSKRKNPTSISYYSALGYIPEALMNFLGLFFIQIAEGEELLTMEELS HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHH AKFDPENLSKAGAIFDIQKLDWLNGRWIREKLSEEEFQARVLAWAMENDRLKAGLRLSQT CCCCHHHHHHCCCEEEHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCHHHHH RISKLGELPDLAGFLLKSDLGLQPSDFAKIKSPPEEILEILNTVQPDLEKILEWNVETIE HHHHHCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHH AELRAIADRMGKKLKVVVSPLFVAVSGSSRSLPLFDSMAILGRSVVRQRLKLAAQAVAAL HHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSK HCCC >Mature Secondary Structure TTSGVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFETKV CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHH LDALKWCGLEWKEGPDIGGPYGPYRQSDRKPMYQPYAEELLDKGHAFRCFCTPARLEQMR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECHHHHHHHH EAQRAAGKPPKYDGLCLSLTAEEVTSRMAAGETTVIRMKIPAEGSCDFTDGVYGDVSIPW HHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC DSVDMQVLIKADGMPTYHMANVIDDHLMKITHVARGEEWLASVPKHILLYRYFGWDQPVF CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEHHHCCCCCHHH MHLSLMRNADKSKLSKRKNPTSISYYSALGYIPEALMNFLGLFFIQIAEGEELLTMEELS HHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHH AKFDPENLSKAGAIFDIQKLDWLNGRWIREKLSEEEFQARVLAWAMENDRLKAGLRLSQT CCCCHHHHHHCCCEEEHHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHCCHHHHH RISKLGELPDLAGFLLKSDLGLQPSDFAKIKSPPEEILEILNTVQPDLEKILEWNVETIE HHHHHCCCHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHCCHHHHH AELRAIADRMGKKLKVVVSPLFVAVSGSSRSLPLFDSMAILGRSVVRQRLKLAAQAVAAL HHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGSK HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA