| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yceA [C]
Identifier: 209550977
GI number: 209550977
Start: 3511893
End: 3512822
Strand: Direct
Name: yceA [C]
Synonym: Rleg2_3401
Alternate gene names: 209550977
Gene position: 3511893-3512822 (Clockwise)
Preceding gene: 209550976
Following gene: 209550980
Centisome position: 77.39
GC content: 61.08
Gene sequence:
>930_bases ATGACCGACAGCCTGACACACACCAGCCCGTTCCTCGTGGCCGCACTCTACCATTTCGTTTCCGTGCCGCGTTTTGAGAA CCTCCAGGCGCTGCTGCAGACGCTGTGCGAGCAGAGCGGCGTCAAGGGAACGCTGCTTCTGGCGCATGAGGGCATCAACG GCACGATCGCCGGCCCGGATGCCGGTATTGCCGCGGTGCTTTCCTTCCTGCGGGCCCAGCCGGAATTTTCAGGCCTGGAG CATAAGGAAAGCCGCGCTTCGAAAATGCCTTTCCTGCGGATGAAGGTGAAGCTGAAGAAAGAGATCGTCACCATGGGCGT CGAGGATATCGACCCCAACAAGGTGGTCGGCACCTATGTGGCGCCGCAGGAGTGGAACGCGCTGATTTCCGATCCCGATA CGATCGTCATCGATACCCGCAACGATTACGAGACGGCAATCGGCACCTTTCGCGGCGCGCTCGACCCGAAGACGAAGACC TTCCGCGAATTTCCAGATTGGGTGCGCAGCAATTCCGGCCTGCACAACAAGCCCAAGATCGCCATGTATTGCACCGGCGG CATACGCTGCGAGAAGGCCACCGCCTTCATGAAGGCCGAGGGCTTCGACGAGGTCTATCATCTGAAGGGCGGCATCCTGA AATATCTCGAAGAAGTGCCGCAGGAGGAAAGCCTGTGGGACGGCGCCTGCTTCGTTTTCGACGAGCGCGTCTCCGTCGAG CACGGGCTGAAGGAAGGCGAACACCGGCTGTGCCATGCCTGCCGCAACCCGATCACCGCAGAAGAGATCACCTCGCCACT CTATGAGGAAGGCGTTTCCTGCAGCCATTGCTACGACACCCGCACCGAAGAGGATCGGCTGCGCTACCGTCAGCGGCAGC ACCAGATCGCCCTCGCCAGGAAGCGCGGCCAGCGGCATATCGGCAGCTGA
Upstream 100 bases:
>100_bases CGTTTTCCGAATGGCAGGCGAAAGCGTAGCCGCTCATCCGCCAAGGCCGCCACCGGTCAAGGCAATTGCGCGAGCCGCCG ATTTTCTGTATTTCCGCCCC
Downstream 100 bases:
>100_bases GCCAGTATCCTTTCCGGATCAGCCCCCATTTTTCGTGAATCTCTACCAGCGCCCGTCAGGCTGCGCCAAGACGGCGCCGG CCTTCCGGCTCGGCTGCATG
Product: rhodanese
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTDSLTHTSPFLVAALYHFVSVPRFENLQALLQTLCEQSGVKGTLLLAHEGINGTIAGPDAGIAAVLSFLRAQPEFSGLE HKESRASKMPFLRMKVKLKKEIVTMGVEDIDPNKVVGTYVAPQEWNALISDPDTIVIDTRNDYETAIGTFRGALDPKTKT FREFPDWVRSNSGLHNKPKIAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVE HGLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCYDTRTEEDRLRYRQRQHQIALARKRGQRHIGS
Sequences:
>Translated_309_residues MTDSLTHTSPFLVAALYHFVSVPRFENLQALLQTLCEQSGVKGTLLLAHEGINGTIAGPDAGIAAVLSFLRAQPEFSGLE HKESRASKMPFLRMKVKLKKEIVTMGVEDIDPNKVVGTYVAPQEWNALISDPDTIVIDTRNDYETAIGTFRGALDPKTKT FREFPDWVRSNSGLHNKPKIAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVE HGLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCYDTRTEEDRLRYRQRQHQIALARKRGQRHIGS >Mature_308_residues TDSLTHTSPFLVAALYHFVSVPRFENLQALLQTLCEQSGVKGTLLLAHEGINGTIAGPDAGIAAVLSFLRAQPEFSGLEH KESRASKMPFLRMKVKLKKEIVTMGVEDIDPNKVVGTYVAPQEWNALISDPDTIVIDTRNDYETAIGTFRGALDPKTKTF REFPDWVRSNSGLHNKPKIAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVEH GLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCYDTRTEEDRLRYRQRQHQIALARKRGQRHIGS
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=249, Percent_Identity=35.3413654618474, Blast_Score=144, Evalue=8e-35, Organism=Escherichia coli, GI1787294, Length=261, Percent_Identity=35.632183908046, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3401_RHILW (B5ZQU6)
Other databases:
- EMBL: CP001191 - RefSeq: YP_002282894.1 - ProteinModelPortal: B5ZQU6 - SMR: B5ZQU6 - GeneID: 6982155 - GenomeReviews: CP001191_GR - KEGG: rlt:Rleg2_3401 - HOGENOM: HBG366219 - OMA: QVYHLKG - ProtClustDB: CLSK800767 - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 34742; Mature: 34611
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSLTHTSPFLVAALYHFVSVPRFENLQALLQTLCEQSGVKGTLLLAHEGINGTIAGPD CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC AGIAAVLSFLRAQPEFSGLEHKESRASKMPFLRMKVKLKKEIVTMGVEDIDPNKVVGTYV CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE APQEWNALISDPDTIVIDTRNDYETAIGTFRGALDPKTKTFREFPDWVRSNSGLHNKPKI CCHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCE AMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVE EEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHH HGLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCYDTRTEEDRLRYRQRQHQIALAR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH KRGQRHIGS HHHHCCCCC >Mature Secondary Structure TDSLTHTSPFLVAALYHFVSVPRFENLQALLQTLCEQSGVKGTLLLAHEGINGTIAGPD CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCC AGIAAVLSFLRAQPEFSGLEHKESRASKMPFLRMKVKLKKEIVTMGVEDIDPNKVVGTYV CCHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE APQEWNALISDPDTIVIDTRNDYETAIGTFRGALDPKTKTFREFPDWVRSNSGLHNKPKI CCHHCCHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCE AMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACFVFDERVSVE EEEECCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHH HGLKEGEHRLCHACRNPITAEEITSPLYEEGVSCSHCYDTRTEEDRLRYRQRQHQIALAR HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH KRGQRHIGS HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA