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The map label for this gene is ycbR [H]

Identifier: 209550952

GI number: 209550952

Start: 3488861

End: 3489640

Strand: Reverse

Name: ycbR [H]

Synonym: Rleg2_3376

Alternate gene names: 209550952

Gene position: 3489640-3488861 (Counterclockwise)

Preceding gene: 209550953

Following gene: 209550950

Centisome position: 76.9

GC content: 57.44

Gene sequence:

>780_bases
ATGACGACATTCAAGCTGCACAAGCCCGAGGAAGAAGTTCGACGCGTCGGCTTCGTCCTTCAGAAACAGGGCATTCACGA
GCGCATTCCTGCCCAAGTCGGAATCAACATCGATGTCTCGGGCTCGATGACCGATCTTTTCAAATCTGGTGCGGTCCAGG
CGGCGCTCGAGCGTATTCTTCCCGTCGCTCTTTATTTCGATGACGACGGGCGTATCGATACCTGGGTGTTTTCCAATCAG
GAGAGGATGGCATCGATCGCGCCGGCCACCGCCAAAAATTACGAGGGTTACGTCGAGCGTGAAATCATCGGCAACAATGC
GCTGAAAGCCGTACTTTGGGGCGGCACGGATTACGGACCGGTCATCCGCTCGAACCTGATGACGTACGGCTTGATGGAAG
AGGAGGCGGCTGGCGGCCTGCTCGGCATGATCTTCGGCATGAGTCGCGATACATTCGGCGAGGAGACACGGTCGGGGATT
CCGGCGATCAACTACTTCCTCACCGATGGCGAGAATGCCGACAGAGACGCGGCCTGGGCTCTGCTGCAAAAGGCCGAGCA
TGCCGAATCGCAGATCTACTATGTCATGGTCGGTGTCGGTGACGAGCGTTTCGACTTCTTGCGCAGCGCGGCCGAGCAAT
TTCCGAATGTCGGCTTTGTCAGCGTCAAGGATCTTGGGGAGTTCGTTGGCAGCGACGATGCCTATGAGAAACTGCTACCG
GCGGAGCTCTGCACCTGGCTCAAGCACGAGCATGACGACGAGGACGACGATCACCATTGA

Upstream 100 bases:

>100_bases
CGGCCCGAAGCGCGCAATCGTCAGCGCAGGCTGGCACCAGATCACTGCTTCGCGACATTCATGCGCGCATTCTTGGAAAA
CTCAGATCGGAGGAATGACA

Downstream 100 bases:

>100_bases
TGGTGTGTTCAACGCTTGGCGGGCTGATAGCGCGCCGGTGCCGCGCCGTCAGGCGATCGCCTGCGCGGGGGTGACCGGCA
GCTTGCCGGCGGCATAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF17 [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTTFKLHKPEEEVRRVGFVLQKQGIHERIPAQVGINIDVSGSMTDLFKSGAVQAALERILPVALYFDDDGRIDTWVFSNQ
ERMASIAPATAKNYEGYVEREIIGNNALKAVLWGGTDYGPVIRSNLMTYGLMEEEAAGGLLGMIFGMSRDTFGEETRSGI
PAINYFLTDGENADRDAAWALLQKAEHAESQIYYVMVGVGDERFDFLRSAAEQFPNVGFVSVKDLGEFVGSDDAYEKLLP
AELCTWLKHEHDDEDDDHH

Sequences:

>Translated_259_residues
MTTFKLHKPEEEVRRVGFVLQKQGIHERIPAQVGINIDVSGSMTDLFKSGAVQAALERILPVALYFDDDGRIDTWVFSNQ
ERMASIAPATAKNYEGYVEREIIGNNALKAVLWGGTDYGPVIRSNLMTYGLMEEEAAGGLLGMIFGMSRDTFGEETRSGI
PAINYFLTDGENADRDAAWALLQKAEHAESQIYYVMVGVGDERFDFLRSAAEQFPNVGFVSVKDLGEFVGSDDAYEKLLP
AELCTWLKHEHDDEDDDHH
>Mature_258_residues
TTFKLHKPEEEVRRVGFVLQKQGIHERIPAQVGINIDVSGSMTDLFKSGAVQAALERILPVALYFDDDGRIDTWVFSNQE
RMASIAPATAKNYEGYVEREIIGNNALKAVLWGGTDYGPVIRSNLMTYGLMEEEAAGGLLGMIFGMSRDTFGEETRSGIP
AINYFLTDGENADRDAAWALLQKAEHAESQIYYVMVGVGDERFDFLRSAAEQFPNVGFVSVKDLGEFVGSDDAYEKLLPA
ELCTWLKHEHDDEDDDHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28892; Mature: 28760

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFKLHKPEEEVRRVGFVLQKQGIHERIPAQVGINIDVSGSMTDLFKSGAVQAALERIL
CCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCCEEECCCCHHHHHHHCHHHHHHHHHC
PVALYFDDDGRIDTWVFSNQERMASIAPATAKNYEGYVEREIIGNNALKAVLWGGTDYGP
EEEEEECCCCCEEEEEECCHHHHHHHCCCHHCCCCCEEHHHHHCCCCEEEEEECCCCCHH
VIRSNLMTYGLMEEEAAGGLLGMIFGMSRDTFGEETRSGIPAINYFLTDGENADRDAAWA
HHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHH
LLQKAEHAESQIYYVMVGVGDERFDFLRSAAEQFPNVGFVSVKDLGEFVGSDDAYEKLLP
HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHH
AELCTWLKHEHDDEDDDHH
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TTFKLHKPEEEVRRVGFVLQKQGIHERIPAQVGINIDVSGSMTDLFKSGAVQAALERIL
CCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCCEEECCCCHHHHHHHCHHHHHHHHHC
PVALYFDDDGRIDTWVFSNQERMASIAPATAKNYEGYVEREIIGNNALKAVLWGGTDYGP
EEEEEECCCCCEEEEEECCHHHHHHHCCCHHCCCCCEEHHHHHCCCCEEEEEECCCCCHH
VIRSNLMTYGLMEEEAAGGLLGMIFGMSRDTFGEETRSGIPAINYFLTDGENADRDAAWA
HHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCCCCHHHHHH
LLQKAEHAESQIYYVMVGVGDERFDFLRSAAEQFPNVGFVSVKDLGEFVGSDDAYEKLLP
HHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHHHHH
AELCTWLKHEHDDEDDDHH
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704254; 9384377; 8760916 [H]