| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550922
Identifier: 209550922
GI number: 209550922
Start: 3449063
End: 3450298
Strand: Direct
Name: 209550922
Synonym: Rleg2_3346
Alternate gene names: NA
Gene position: 3449063-3450298 (Clockwise)
Preceding gene: 209550921
Following gene: 209550923
Centisome position: 76.0
GC content: 57.77
Gene sequence:
>1236_bases ATGAGCACCTCTTTTTTGTATCCCCGCCTGCGTCGCATGTTCAGCGATCGAGGCGGTAACTTCGGTATCATGACGGCGAT TATGGCGCCGGTTCTTCTCGGCGTTGCCGGCGTGGCGATCCAGGTCGGGGATATGATGCTCTCAAAGCAGCAGTTGCAGG AGGCGGCCGATTCAGCGGCGCTGGCGACCGCTACGGCGCTAGCAAACGGCACGATCCAAACGTCGCAAGCCGAGGCCTTT GCGCAGAATTTCGTCGCCGGCCAGATGGCGAATTACGTGCAGAGCGGCGTCGATTTCAAAAGCGGCACGAGCGTCAATGT GCAGACAAGCACATCGGGCAAATCGACATCCTACCAGGTAACGGTTTCACCGAGTTACGACCTGACGGTCAATCCGCTGA TGCAGGCGGTCGGCTTCAAGACCCAGCATCTCTCGACCTCCGGCACGACGGTCGGCGGGCACTCACAGACTCAAGGCTCG ATCTCGATGTTTCTCGCGCTCGATAAATCAGGGTCGATGGGAGAGGCTACCGCGACCGTCAATGCGGACGACCCAACGGA ATCGTACACCTACGACTGCAACCTCCATTACAACAGCAAGAATAATAAGTGGGTTTACGACAAATGCACCGGCAGCCGCA CAAATTACTACACCAAGATCGAGGCGCTTAAGATCGCCGCCGGCAATCTCTTCGGCCAGCTGAACAGCGCCGATCCCAAT GCGGAGTACGTGCGCACTGGCGCCGTGTCCTATGATATCAACCAATACACTCCGAGCAATCTCGCCTGGGGAACCGCCGG TGTCACCAGCTATGTCAACGCACTTCAGGCGAATGGCGGCACGAATTCGAGCGGCGCAATGAGCACCGCCTATTCGTCCC TGACGGCGAAGAATGCTGCGGGGAACGACGCCGAGGACTCCGCCCACAAGCTGAAGACCGGGCAAACACCCAAAAAGTAC ATCGTCTTCATGACGGACGGCGACAATAACGACGATAGCAGCGGCGGCCGTTCATATGATACGCTGACCAAGGCAACATG CGACACGGCCAAATCGAAGGGCATCGAGATCTATACGATCGCCTTCATGGCCCCGGCGGGGGGACAAACGCTGCTGCATT ATTGCGCCTCCGATGACTCCCACTATTTCCAGGCGGAAAAAATGGAAGACCTGCTCGCCGCGTTCAAAGCGATCGGAGCG AAGGCCTCTGCTCAGATGACACGTCTGACGAACTGA
Upstream 100 bases:
>100_bases AAATCCTCGGGTTCGTTAAAATTCTATTGACGCTGTAAGGCAGGCGTAAAGAAGCAGCGTGCGTTAATCACCTCATAGGG TTTCCAATTGGGTGAACATG
Downstream 100 bases:
>100_bases TAAGGGCCCGGGAAACGGAAAACGAAAAGCCGCGCCGGAACAAACCGGCGCGGCTTTTCGTTATCGCTATCCCACCCATC TGATCGGGAAAAGCGATTGA
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSTSFLYPRLRRMFSDRGGNFGIMTAIMAPVLLGVAGVAIQVGDMMLSKQQLQEAADSAALATATALANGTIQTSQAEAF AQNFVAGQMANYVQSGVDFKSGTSVNVQTSTSGKSTSYQVTVSPSYDLTVNPLMQAVGFKTQHLSTSGTTVGGHSQTQGS ISMFLALDKSGSMGEATATVNADDPTESYTYDCNLHYNSKNNKWVYDKCTGSRTNYYTKIEALKIAAGNLFGQLNSADPN AEYVRTGAVSYDINQYTPSNLAWGTAGVTSYVNALQANGGTNSSGAMSTAYSSLTAKNAAGNDAEDSAHKLKTGQTPKKY IVFMTDGDNNDDSSGGRSYDTLTKATCDTAKSKGIEIYTIAFMAPAGGQTLLHYCASDDSHYFQAEKMEDLLAAFKAIGA KASAQMTRLTN
Sequences:
>Translated_411_residues MSTSFLYPRLRRMFSDRGGNFGIMTAIMAPVLLGVAGVAIQVGDMMLSKQQLQEAADSAALATATALANGTIQTSQAEAF AQNFVAGQMANYVQSGVDFKSGTSVNVQTSTSGKSTSYQVTVSPSYDLTVNPLMQAVGFKTQHLSTSGTTVGGHSQTQGS ISMFLALDKSGSMGEATATVNADDPTESYTYDCNLHYNSKNNKWVYDKCTGSRTNYYTKIEALKIAAGNLFGQLNSADPN AEYVRTGAVSYDINQYTPSNLAWGTAGVTSYVNALQANGGTNSSGAMSTAYSSLTAKNAAGNDAEDSAHKLKTGQTPKKY IVFMTDGDNNDDSSGGRSYDTLTKATCDTAKSKGIEIYTIAFMAPAGGQTLLHYCASDDSHYFQAEKMEDLLAAFKAIGA KASAQMTRLTN >Mature_410_residues STSFLYPRLRRMFSDRGGNFGIMTAIMAPVLLGVAGVAIQVGDMMLSKQQLQEAADSAALATATALANGTIQTSQAEAFA QNFVAGQMANYVQSGVDFKSGTSVNVQTSTSGKSTSYQVTVSPSYDLTVNPLMQAVGFKTQHLSTSGTTVGGHSQTQGSI SMFLALDKSGSMGEATATVNADDPTESYTYDCNLHYNSKNNKWVYDKCTGSRTNYYTKIEALKIAAGNLFGQLNSADPNA EYVRTGAVSYDINQYTPSNLAWGTAGVTSYVNALQANGGTNSSGAMSTAYSSLTAKNAAGNDAEDSAHKLKTGQTPKKYI VFMTDGDNNDDSSGGRSYDTLTKATCDTAKSKGIEIYTIAFMAPAGGQTLLHYCASDDSHYFQAEKMEDLLAAFKAIGAK ASAQMTRLTN
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43458; Mature: 43326
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50234 VWFA ; PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSFLYPRLRRMFSDRGGNFGIMTAIMAPVLLGVAGVAIQVGDMMLSKQQLQEAADSAA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATATALANGTIQTSQAEAFAQNFVAGQMANYVQSGVDFKSGTSVNVQTSTSGKSTSYQV HHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEE TVSPSYDLTVNPLMQAVGFKTQHLSTSGTTVGGHSQTQGSISMFLALDKSGSMGEATATV EECCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE NADDPTESYTYDCNLHYNSKNNKWVYDKCTGSRTNYYTKIEALKIAAGNLFGQLNSADPN CCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEEEEEECCHHHCCCCCCCCC AEYVRTGAVSYDINQYTPSNLAWGTAGVTSYVNALQANGGTNSSGAMSTAYSSLTAKNAA HHEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC GNDAEDSAHKLKTGQTPKKYIVFMTDGDNNDDSSGGRSYDTLTKATCDTAKSKGIEIYTI CCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE AFMAPAGGQTLLHYCASDDSHYFQAEKMEDLLAAFKAIGAKASAQMTRLTN EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure STSFLYPRLRRMFSDRGGNFGIMTAIMAPVLLGVAGVAIQVGDMMLSKQQLQEAADSAA CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATATALANGTIQTSQAEAFAQNFVAGQMANYVQSGVDFKSGTSVNVQTSTSGKSTSYQV HHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEE TVSPSYDLTVNPLMQAVGFKTQHLSTSGTTVGGHSQTQGSISMFLALDKSGSMGEATATV EECCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE NADDPTESYTYDCNLHYNSKNNKWVYDKCTGSRTNYYTKIEALKIAAGNLFGQLNSADPN CCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEEEEEECCHHHCCCCCCCCC AEYVRTGAVSYDINQYTPSNLAWGTAGVTSYVNALQANGGTNSSGAMSTAYSSLTAKNAA HHEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCC GNDAEDSAHKLKTGQTPKKYIVFMTDGDNNDDSSGGRSYDTLTKATCDTAKSKGIEIYTI CCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE AFMAPAGGQTLLHYCASDDSHYFQAEKMEDLLAAFKAIGAKASAQMTRLTN EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA