| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550920
Identifier: 209550920
GI number: 209550920
Start: 3445647
End: 3448064
Strand: Direct
Name: 209550920
Synonym: Rleg2_3344
Alternate gene names: NA
Gene position: 3445647-3448064 (Clockwise)
Preceding gene: 209550919
Following gene: 209550921
Centisome position: 75.93
GC content: 67.25
Gene sequence:
>2418_bases ATGGGTAAGAGGCCGGCAACAGAGCGCAGGGAAGAGACAGAGGACCGCACCGGCAAACGTGCGGCCTTCGACTATGCGCC GCTTCCCGGCACCGCCGACGAGATGGTTGACAACAAAGGCAGGGTCCGCCCGGTCTGGCAGCATTTCCTCTCGCATCTGA GCGCAATGCCGGAAAAGGATCTTGCCGAGCGTTTTGCCCGCGCCGACCGCTACCTCAGAGACGCCGGCGTCTTCTACCGG GCCTATGGCAGCAAGGGCACCGGCGAACGCGCCTGGCCGATCTCGCATATCCCGGTGCTGATCGACGAGCGCGAATGGCA GACGCTGTCGGCCGGCCTCGTCCAGCGCGCTGACCTGCTGGAAGCGATCGTCGCCGACATCTACGGCGACAACCGGCTGG TGGAGGAAGGCGTCCTGCCGCCGGCGCTGATGGCCGCCAATCCCGAATTCCAACGCCCGCTTGCCGGCATCCGGCCGGCC TCCGGCCATTATCTGCATTTCTGCGCCTTCGAGATCGGCCGCGGGCCGGATGGCAATTGGTGGGTGCTGGCCGACAGGAC GCAGGCGCCGTCGGGCGCCGGTTTCGCGTTGGAAAGCCGCGTCGCGACCACCCGGGCGTTCTCGGATATCTATGCCGAAA CCCCGGTCCACCGCCTCGCCTCGTTCTTCGGCGGCTTCCGCGACGCGCTGCAGGGGATGAAACATTCCGGCGACGACCGC ATCGCCGTGCTGACGCCGGGCCCCGCCAACGAGACCTATTACGAACACGCCTACATCGCCCGCTATCTCGGCTTCATGCT GCTCGAGGGTGAGGATCTCACCGTCGTCAAGGGCCGCGTCATGGTGCGCACCGTCGCCGGCCTGAAGCCGATCGGCGTGC TCTGGCGCCGTCTCGATTCGGCCTTTGCCGACCCGCTCGAACTGAACCAGAATTCGCATATCGGCACCCCCGGCCTCGTC GAAGCGCTGCGCGCCGAAAGCGTCACCATCGTCAATGCGCTCGGAACCGGCGTTCTCGAGACCCGGGCGCTGCTGGCTTT CATGCCGACCATCTGCCGCCGCCTGCTGGGGCAGGATCTGCAACTGCCCTCGATCGCCACCTGGTGGTGCGGCCAGGAAG ACGAACGCGAGCACGTCGCCAAGCATATCGAGAAGATGGTGATCGGCCCGGCCTATTCCCGCGCCCCCTTCTTCGACGAC GACGGCGAATCCGTGCTCGGCTCGTCGCTGCGGGCGACCGCCAAGGATTCCATCACCGACTGGCTGAGTTCGGACGGCCC GAAACTGGTGGGACAGGAGGTCGTCACGCTGTCGACGACGCCCGCCTGGGTCGACGGCAAGCTGGTGCCGCGGCCGATGT CGCTGCGCGTCTTCGCCGCCCGCACGGCGAACGGCTGGCAGATCATGCCCGGCGGTTTTGCCCGTATCGGCTCCGGCGCC GATGTCGCGGCGATCGCCATGCAGTCGGGCGGCGCGGCCGCCGACGTCTGGATCGTCAGCGACAAGCCGGTCGAGCGCCA CACGCTGCTGCCGGCCGAGGGCAGCTTTACCCGCAACATGCCGGGCAGCCTGCCAAGCCGGGCGGCCGACAATCTGTTCT GGCTCGGCCGCTACATCGAGCGCGCCGAAGGGGCGCTGCGCATCCTGCGCGCCTGGCATGCGCGTTACGCCGAAGCCGCC GATCCGAGCCAGCCGCTGCTCGCCGACGTCTCCGCCTATCTCTCAGCCGTCGATATCGATACCGCCGAACCCGTGCCGGA AACGCTGCTGCGCAACATCGACAGCGCCGTTTATTCGGCGAGCAACATCCGCGACCGTTTTTCGCCGGATGGCTGGCTGG CGCTCAACGATCTTGCCAAGACCGCCCGCCGCTTCCATGTCACCGTCGCCGCCGGCGACGACGCCAGCCACGCGATGACG ATCCTTCTGCGCAAGCTTGCGGGCTTTGCCGGCCTCGTGCACGAAAACATGTACCGCTTCATGGGCTGGCGCTTCCTCTC GCTCGGCCGCTATATCGAGCGCGGCCTGCACATGACGCGGCTGCTCGGCCACATGTCCGGCCCGGAAGCGCCCGACGGCG CCCTCGACATGCTGCTCGAAATCGGCGACAGCGTCATGACCCACCGCCGCCGCTACAACGTCAACACGGCGCGGCTGACC GTCACCGACCTGCTGGCGCTCGATCCCCTCAACCCCCGCTCGGTCCTCTTCCAGGTCAACGAGATCCACCACGAGGTCGA GCAGCTGCCGAACGCCCTGATCAACGGCCAGATGTCGCCCTTCTACCGCGAGGCGATGCGGCTCCACTCGGGCCTGGCGG TGATGACGCCGGAGGGCATGGGGGCCGAGGTCTATCAGCGCCTCGAACGCGAATTGGAGCAGCTTTCCGATCTGCTCGCC CAGACCTATCTCGGGTGA
Upstream 100 bases:
>100_bases TCCGCGGGCCGAGACGGGCTCGCTGGAATTCCCGCTGACGCTGGATCTGCGGCGGCCCGCTGGAATTTGATGCCGGGGTT GGGGGATAGCTTGGGTTTTG
Downstream 100 bases:
>100_bases CGGCGATGCTTTACGATCTTTCGCTGCGCATGGGTTACAGCTACGACGTGCCGGCCTCCGGCGCCCGCCACATCATGCGC CTGATGCCGCTGTCGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 805; Mature: 804
Protein sequence:
>805_residues MGKRPATERREETEDRTGKRAAFDYAPLPGTADEMVDNKGRVRPVWQHFLSHLSAMPEKDLAERFARADRYLRDAGVFYR AYGSKGTGERAWPISHIPVLIDEREWQTLSAGLVQRADLLEAIVADIYGDNRLVEEGVLPPALMAANPEFQRPLAGIRPA SGHYLHFCAFEIGRGPDGNWWVLADRTQAPSGAGFALESRVATTRAFSDIYAETPVHRLASFFGGFRDALQGMKHSGDDR IAVLTPGPANETYYEHAYIARYLGFMLLEGEDLTVVKGRVMVRTVAGLKPIGVLWRRLDSAFADPLELNQNSHIGTPGLV EALRAESVTIVNALGTGVLETRALLAFMPTICRRLLGQDLQLPSIATWWCGQEDEREHVAKHIEKMVIGPAYSRAPFFDD DGESVLGSSLRATAKDSITDWLSSDGPKLVGQEVVTLSTTPAWVDGKLVPRPMSLRVFAARTANGWQIMPGGFARIGSGA DVAAIAMQSGGAAADVWIVSDKPVERHTLLPAEGSFTRNMPGSLPSRAADNLFWLGRYIERAEGALRILRAWHARYAEAA DPSQPLLADVSAYLSAVDIDTAEPVPETLLRNIDSAVYSASNIRDRFSPDGWLALNDLAKTARRFHVTVAAGDDASHAMT ILLRKLAGFAGLVHENMYRFMGWRFLSLGRYIERGLHMTRLLGHMSGPEAPDGALDMLLEIGDSVMTHRRRYNVNTARLT VTDLLALDPLNPRSVLFQVNEIHHEVEQLPNALINGQMSPFYREAMRLHSGLAVMTPEGMGAEVYQRLERELEQLSDLLA QTYLG
Sequences:
>Translated_805_residues MGKRPATERREETEDRTGKRAAFDYAPLPGTADEMVDNKGRVRPVWQHFLSHLSAMPEKDLAERFARADRYLRDAGVFYR AYGSKGTGERAWPISHIPVLIDEREWQTLSAGLVQRADLLEAIVADIYGDNRLVEEGVLPPALMAANPEFQRPLAGIRPA SGHYLHFCAFEIGRGPDGNWWVLADRTQAPSGAGFALESRVATTRAFSDIYAETPVHRLASFFGGFRDALQGMKHSGDDR IAVLTPGPANETYYEHAYIARYLGFMLLEGEDLTVVKGRVMVRTVAGLKPIGVLWRRLDSAFADPLELNQNSHIGTPGLV EALRAESVTIVNALGTGVLETRALLAFMPTICRRLLGQDLQLPSIATWWCGQEDEREHVAKHIEKMVIGPAYSRAPFFDD DGESVLGSSLRATAKDSITDWLSSDGPKLVGQEVVTLSTTPAWVDGKLVPRPMSLRVFAARTANGWQIMPGGFARIGSGA DVAAIAMQSGGAAADVWIVSDKPVERHTLLPAEGSFTRNMPGSLPSRAADNLFWLGRYIERAEGALRILRAWHARYAEAA DPSQPLLADVSAYLSAVDIDTAEPVPETLLRNIDSAVYSASNIRDRFSPDGWLALNDLAKTARRFHVTVAAGDDASHAMT ILLRKLAGFAGLVHENMYRFMGWRFLSLGRYIERGLHMTRLLGHMSGPEAPDGALDMLLEIGDSVMTHRRRYNVNTARLT VTDLLALDPLNPRSVLFQVNEIHHEVEQLPNALINGQMSPFYREAMRLHSGLAVMTPEGMGAEVYQRLERELEQLSDLLA QTYLG >Mature_804_residues GKRPATERREETEDRTGKRAAFDYAPLPGTADEMVDNKGRVRPVWQHFLSHLSAMPEKDLAERFARADRYLRDAGVFYRA YGSKGTGERAWPISHIPVLIDEREWQTLSAGLVQRADLLEAIVADIYGDNRLVEEGVLPPALMAANPEFQRPLAGIRPAS GHYLHFCAFEIGRGPDGNWWVLADRTQAPSGAGFALESRVATTRAFSDIYAETPVHRLASFFGGFRDALQGMKHSGDDRI AVLTPGPANETYYEHAYIARYLGFMLLEGEDLTVVKGRVMVRTVAGLKPIGVLWRRLDSAFADPLELNQNSHIGTPGLVE ALRAESVTIVNALGTGVLETRALLAFMPTICRRLLGQDLQLPSIATWWCGQEDEREHVAKHIEKMVIGPAYSRAPFFDDD GESVLGSSLRATAKDSITDWLSSDGPKLVGQEVVTLSTTPAWVDGKLVPRPMSLRVFAARTANGWQIMPGGFARIGSGAD VAAIAMQSGGAAADVWIVSDKPVERHTLLPAEGSFTRNMPGSLPSRAADNLFWLGRYIERAEGALRILRAWHARYAEAAD PSQPLLADVSAYLSAVDIDTAEPVPETLLRNIDSAVYSASNIRDRFSPDGWLALNDLAKTARRFHVTVAAGDDASHAMTI LLRKLAGFAGLVHENMYRFMGWRFLSLGRYIERGLHMTRLLGHMSGPEAPDGALDMLLEIGDSVMTHRRRYNVNTARLTV TDLLALDPLNPRSVLFQVNEIHHEVEQLPNALINGQMSPFYREAMRLHSGLAVMTPEGMGAEVYQRLERELEQLSDLLAQ TYLG
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 88851; Mature: 88720
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRPATERREETEDRTGKRAAFDYAPLPGTADEMVDNKGRVRPVWQHFLSHLSAMPEKD CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHH LAERFARADRYLRDAGVFYRAYGSKGTGERAWPISHIPVLIDEREWQTLSAGLVQRADLL HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH EAIVADIYGDNRLVEEGVLPPALMAANPEFQRPLAGIRPASGHYLHFCAFEIGRGPDGNW HHHHHHHCCCCHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCE WVLADRTQAPSGAGFALESRVATTRAFSDIYAETPVHRLASFFGGFRDALQGMKHSGDDR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCE IAVLTPGPANETYYEHAYIARYLGFMLLEGEDLTVVKGRVMVRTVAGLKPIGVLWRRLDS EEEECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEECHHHHHHHHCCCHHHHHHHHHHH AFADPLELNQNSHIGTPGLVEALRAESVTIVNALGTGVLETRALLAFMPTICRRLLGQDL HHCCCHHCCCCCCCCCHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCC QLPSIATWWCGQEDEREHVAKHIEKMVIGPAYSRAPFFDDDGESVLGSSLRATAKDSITD CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WLSSDGPKLVGQEVVTLSTTPAWVDGKLVPRPMSLRVFAARTANGWQIMPGGFARIGSGA HHCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCEECCCCHHHCCCCC DVAAIAMQSGGAAADVWIVSDKPVERHTLLPAEGSFTRNMPGSLPSRAADNLFWLGRYIE CEEEEEECCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RAEGALRILRAWHARYAEAADPSQPLLADVSAYLSAVDIDTAEPVPETLLRNIDSAVYSA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SNIRDRFSPDGWLALNDLAKTARRFHVTVAAGDDASHAMTILLRKLAGFAGLVHENMYRF HHHHHCCCCCCCEEHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGWRFLSLGRYIERGLHMTRLLGHMSGPEAPDGALDMLLEIGDSVMTHRRRYNVNTARLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEE VTDLLALDPLNPRSVLFQVNEIHHEVEQLPNALINGQMSPFYREAMRLHSGLAVMTPEGM HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCC GAEVYQRLERELEQLSDLLAQTYLG CHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKRPATERREETEDRTGKRAAFDYAPLPGTADEMVDNKGRVRPVWQHFLSHLSAMPEKD CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCHHH LAERFARADRYLRDAGVFYRAYGSKGTGERAWPISHIPVLIDEREWQTLSAGLVQRADLL HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH EAIVADIYGDNRLVEEGVLPPALMAANPEFQRPLAGIRPASGHYLHFCAFEIGRGPDGNW HHHHHHHCCCCHHHHHCCCCCHHHHCCCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCE WVLADRTQAPSGAGFALESRVATTRAFSDIYAETPVHRLASFFGGFRDALQGMKHSGDDR EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCE IAVLTPGPANETYYEHAYIARYLGFMLLEGEDLTVVKGRVMVRTVAGLKPIGVLWRRLDS EEEECCCCCCCCHHHHHHHHHHHHHEEECCCCEEEEECHHHHHHHHCCCHHHHHHHHHHH AFADPLELNQNSHIGTPGLVEALRAESVTIVNALGTGVLETRALLAFMPTICRRLLGQDL HHCCCHHCCCCCCCCCHHHHHHHHHCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCC QLPSIATWWCGQEDEREHVAKHIEKMVIGPAYSRAPFFDDDGESVLGSSLRATAKDSITD CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH WLSSDGPKLVGQEVVTLSTTPAWVDGKLVPRPMSLRVFAARTANGWQIMPGGFARIGSGA HHCCCCCCCCCCCEEEEECCCCCCCCEECCCCCCEEEEEEECCCCCEECCCCHHHCCCCC DVAAIAMQSGGAAADVWIVSDKPVERHTLLPAEGSFTRNMPGSLPSRAADNLFWLGRYIE CEEEEEECCCCCEEEEEEECCCCCCHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RAEGALRILRAWHARYAEAADPSQPLLADVSAYLSAVDIDTAEPVPETLLRNIDSAVYSA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH SNIRDRFSPDGWLALNDLAKTARRFHVTVAAGDDASHAMTILLRKLAGFAGLVHENMYRF HHHHHCCCCCCCEEHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MGWRFLSLGRYIERGLHMTRLLGHMSGPEAPDGALDMLLEIGDSVMTHRRRYNVNTARLT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEE VTDLLALDPLNPRSVLFQVNEIHHEVEQLPNALINGQMSPFYREAMRLHSGLAVMTPEGM HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCC GAEVYQRLERELEQLSDLLAQTYLG CHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]