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The map label for this gene is qseC [H]

Identifier: 209550918

GI number: 209550918

Start: 3440809

End: 3442191

Strand: Direct

Name: qseC [H]

Synonym: Rleg2_3342

Alternate gene names: 209550918

Gene position: 3440809-3442191 (Clockwise)

Preceding gene: 209550917

Following gene: 209550919

Centisome position: 75.82

GC content: 65.8

Gene sequence:

>1383_bases
ATGAAAGCCGCCTATTCCCTCAGGCGCCGGCTGCTCTTCTGGCTGCTCGTCTCCACCGCCGTCATCGGCACGCTGGCGCT
TGCCGATACCTATCGCGAGGCGGTTCAGACCTCGAACATCGTCTCCGACCGCGTGCTCGCCGGCTCGGCGCTGGCGATCG
CCGAGCGCGTCGTCGTTGCCGAGGACGGCTCGCTGCAGGTCGACATCCCCTATGTCGCGCTTGAAATGCTGACCTCGGCA
GCGCAGGACCGCGTCTTCTACCGCGTCGACGGTCCGCCGGGCAAATTCATCACCGGCTACCAGTCGCTGCCGGTCCTCAA
GAAAACGCCGGCCAATGCTGCCGCCTTCGCCGACGACACCTTCCGCGGTGAACCGATCCGCGTCGCCACGCTCGAACGCT
CGGCCTCCACAGGCATCCGCTCCGTGCCCTTCGTGGTGACGGTCGCCGAAACCACCATCGCCCGCCGACAGTTAGCGCAA
GCGATCCTCGTTCGCTCGGCCCTGCGCCTCGCCTTCATGATTGCGGGTGCCGCCGTCATCGTCTGGATCTCGGTCACCGT
GGCTCTACGCCCGCTCTACAAACTCGGCGACGCCATCGGCGAACGCAGCCCCGATGACCTGCACCCGATCGAGCAGACCG
TGCCGAGCGAGGTCGAACCGCTGGTCGATACGGTGAATAGCTTCATGGTCCGCCTGCAATCGGCGCTCGATGCGCTGCGC
CATTTCACCGGTAATGCCAGCCATCAGCTGCGCACGCCGCTGGCGATCATCCGCACCCAGCTTGCGCTTTCCGCCCGTGC
CGGCTCGCTTGCCGAGGCCCAGGCGGCAGCGCTGAAGGGGGATCAGGCCGTGGCGCATGCTGAGCGCATCCTTGCCCAGC
TTCTGCTGATGGCAAAGATCGACGCCGCCACCGCCAAGGAGGCGTTGACCGCCTCCGCCATCGATCTTGCGGCAATCGCC
CAGGAAATCACCGGCGAGCAGATCCCGACGGCTGCCGTCGCCGGCATTGATCTCGGTTTCGAAGGCGAGAGCCCGGCGAT
GATCCGCGCCGAGCCGCTGCTGATCGGCGAAATGCTGCGCAATCTTGCCGGAAATGCCATCGCCTATGCCGGCAAGGGGG
CGGAGGTCACCGTCCGCATCATCGCAGCCACGGAGACGATCCGCCTCGAAGTCGAGGACAATGGCCCCGGCATTCCACGC
AATAAACTGGAGGCAGTGCGCGGGCGTTTTTCGCGCGGCAATCAAACAGGTGCGCAAGGCACGGGCCTCGGCCTGCCGAT
CGTCGAGGAAATCGCCAATCTTTTCAACGCCGACCTGACGCTGGAGCCGGGCCCGGACGGCAAGGGTCTGAAGGCGGTCG
TCACCTTTGCCAAGGCGGCTTAA

Upstream 100 bases:

>100_bases
AATATGTCAGCCGCCTGCGCAAACGCCTCTCGCCGCACGGCCTGACGGTCAAGACCGCCCGCGGCATCGGCTATTATCTC
GACAAGCTCCCCGAGGCCTC

Downstream 100 bases:

>100_bases
AAGCCTTCGGCCCTCCTTGCTTTATTTCGCTGCATTGCACACACTGATTTCGGGAACAGCAAGCCGCACGACGATGCGAG
CCGGATAAAAAGAGAAATAT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKAAYSLRRRLLFWLLVSTAVIGTLALADTYREAVQTSNIVSDRVLAGSALAIAERVVVAEDGSLQVDIPYVALEMLTSA
AQDRVFYRVDGPPGKFITGYQSLPVLKKTPANAAAFADDTFRGEPIRVATLERSASTGIRSVPFVVTVAETTIARRQLAQ
AILVRSALRLAFMIAGAAVIVWISVTVALRPLYKLGDAIGERSPDDLHPIEQTVPSEVEPLVDTVNSFMVRLQSALDALR
HFTGNASHQLRTPLAIIRTQLALSARAGSLAEAQAAALKGDQAVAHAERILAQLLLMAKIDAATAKEALTASAIDLAAIA
QEITGEQIPTAAVAGIDLGFEGESPAMIRAEPLLIGEMLRNLAGNAIAYAGKGAEVTVRIIAATETIRLEVEDNGPGIPR
NKLEAVRGRFSRGNQTGAQGTGLGLPIVEEIANLFNADLTLEPGPDGKGLKAVVTFAKAA

Sequences:

>Translated_460_residues
MKAAYSLRRRLLFWLLVSTAVIGTLALADTYREAVQTSNIVSDRVLAGSALAIAERVVVAEDGSLQVDIPYVALEMLTSA
AQDRVFYRVDGPPGKFITGYQSLPVLKKTPANAAAFADDTFRGEPIRVATLERSASTGIRSVPFVVTVAETTIARRQLAQ
AILVRSALRLAFMIAGAAVIVWISVTVALRPLYKLGDAIGERSPDDLHPIEQTVPSEVEPLVDTVNSFMVRLQSALDALR
HFTGNASHQLRTPLAIIRTQLALSARAGSLAEAQAAALKGDQAVAHAERILAQLLLMAKIDAATAKEALTASAIDLAAIA
QEITGEQIPTAAVAGIDLGFEGESPAMIRAEPLLIGEMLRNLAGNAIAYAGKGAEVTVRIIAATETIRLEVEDNGPGIPR
NKLEAVRGRFSRGNQTGAQGTGLGLPIVEEIANLFNADLTLEPGPDGKGLKAVVTFAKAA
>Mature_460_residues
MKAAYSLRRRLLFWLLVSTAVIGTLALADTYREAVQTSNIVSDRVLAGSALAIAERVVVAEDGSLQVDIPYVALEMLTSA
AQDRVFYRVDGPPGKFITGYQSLPVLKKTPANAAAFADDTFRGEPIRVATLERSASTGIRSVPFVVTVAETTIARRQLAQ
AILVRSALRLAFMIAGAAVIVWISVTVALRPLYKLGDAIGERSPDDLHPIEQTVPSEVEPLVDTVNSFMVRLQSALDALR
HFTGNASHQLRTPLAIIRTQLALSARAGSLAEAQAAALKGDQAVAHAERILAQLLLMAKIDAATAKEALTASAIDLAAIA
QEITGEQIPTAAVAGIDLGFEGESPAMIRAEPLLIGEMLRNLAGNAIAYAGKGAEVTVRIIAATETIRLEVEDNGPGIPR
NKLEAVRGRFSRGNQTGAQGTGLGLPIVEEIANLFNADLTLEPGPDGKGLKAVVTFAKAA

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=347, Percent_Identity=29.1066282420749, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790551, Length=293, Percent_Identity=27.9863481228669, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1790861, Length=288, Percent_Identity=27.0833333333333, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=31.2757201646091, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788279, Length=301, Percent_Identity=25.5813953488372, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786783, Length=250, Percent_Identity=25.6, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786600, Length=222, Percent_Identity=27.9279279279279, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787374, Length=259, Percent_Identity=22.7799227799228, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI145693157, Length=209, Percent_Identity=23.9234449760766, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788713, Length=244, Percent_Identity=25, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI87082128, Length=241, Percent_Identity=25.3112033195021, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI1789808, Length=288, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48604; Mature: 48604

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAYSLRRRLLFWLLVSTAVIGTLALADTYREAVQTSNIVSDRVLAGSALAIAERVVVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
EDGSLQVDIPYVALEMLTSAAQDRVFYRVDGPPGKFITGYQSLPVLKKTPANAAAFADDT
CCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCHHCCCCCCHHCCCCC
FRGEPIRVATLERSASTGIRSVPFVVTVAETTIARRQLAQAILVRSALRLAFMIAGAAVI
CCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWISVTVALRPLYKLGDAIGERSPDDLHPIEQTVPSEVEPLVDTVNSFMVRLQSALDALR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HFTGNASHQLRTPLAIIRTQLALSARAGSLAEAQAAALKGDQAVAHAERILAQLLLMAKI
HHCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DAATAKEALTASAIDLAAIAQEITGEQIPTAAVAGIDLGFEGESPAMIRAEPLLIGEMLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCCEEEECHHHHHHHHH
NLAGNAIAYAGKGAEVTVRIIAATETIRLEVEDNGPGIPRNKLEAVRGRFSRGNQTGAQG
HHCCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
TGLGLPIVEEIANLFNADLTLEPGPDGKGLKAVVTFAKAA
CCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKAAYSLRRRLLFWLLVSTAVIGTLALADTYREAVQTSNIVSDRVLAGSALAIAERVVVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEE
EDGSLQVDIPYVALEMLTSAAQDRVFYRVDGPPGKFITGYQSLPVLKKTPANAAAFADDT
CCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCHHCCCCCCHHCCCCC
FRGEPIRVATLERSASTGIRSVPFVVTVAETTIARRQLAQAILVRSALRLAFMIAGAAVI
CCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWISVTVALRPLYKLGDAIGERSPDDLHPIEQTVPSEVEPLVDTVNSFMVRLQSALDALR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
HFTGNASHQLRTPLAIIRTQLALSARAGSLAEAQAAALKGDQAVAHAERILAQLLLMAKI
HHCCCCCCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
DAATAKEALTASAIDLAAIAQEITGEQIPTAAVAGIDLGFEGESPAMIRAEPLLIGEMLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCEEECCCCCCCCEEEECHHHHHHHHH
NLAGNAIAYAGKGAEVTVRIIAATETIRLEVEDNGPGIPRNKLEAVRGRFSRGNQTGAQG
HHCCCEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
TGLGLPIVEEIANLFNADLTLEPGPDGKGLKAVVTFAKAA
CCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]