| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yfeH [C]
Identifier: 209550896
GI number: 209550896
Start: 3418651
End: 3419655
Strand: Direct
Name: yfeH [C]
Synonym: Rleg2_3320
Alternate gene names: 209550896
Gene position: 3418651-3419655 (Clockwise)
Preceding gene: 209550894
Following gene: 209550898
Centisome position: 75.33
GC content: 61.69
Gene sequence:
>1005_bases ATGCGCCGTTTTCTGCCCGATACATTTACCACCCTGCTGGTCTGCACCGTCATTCTCGCCTCGCTGTTTCCGGCGAGCGG CACATTCGCCGGCTATTTCGGCATCGCCACCGATCTTGCCATCGCCGCGCTGTTCTTCCTGCATGGCGCCCGCCTGTCGC GTGACGTCGTCATAGCAGGCCTGTTGCACTGGCGCCTGCATCTCGTCATCCTGCTGACGACCTTCGGCATCTTCCCCTTG CTTGGTCTCGGGCTCGGCTTCATCCCCGACACGATCCTGCCGCAGCCGCTTTATCTCGGCATTCTCTTCCTCTGCGTGCT GCCGTCGACGGTGCAGTCGTCGATCGCCTTCACCTCGATGGCCGGCGGTAACGTGCCTGCCGCCATCTGCTCAGCCTCGG CCTCCAACATTTTCGGCATGTTCCTGACGCCGCTGCTGGTCGGCCTGCTCTTTTCCGTCGGCGGCCATGGCGGATTCTCT TTCGACGCCTTGCAGCAGATCCTGCTGCAGTTGCTTGCCCCCTTCATCGTCGGCCAGATCCTGCAGCCCTGGATCGGCGA CTGGATTCGCGCCAAGAAGAAGATCCTGATGCCCGTCGACCGCGGCTCGATCCTGATGGTGGTCTATCTCGCCTTCTCGA CGGCAGTGGTCGAGGGCCTGTGGCACACCTTCTCGATCGCCGATATCGCCGTCGTCATCGTCGCCGATATGGTTCTCCTT GGAATCGTGCTGGTACTGACGATGCTCGGCAGCCGCTGGCTCGGCTTCAACAAGGCCGACGAGATCACCATCACTTTCTG CGGCTCGAAGAAGAGCCTTGCAAGCGGTGTGCCGATGGCAAACGTCATCTTTTCAGGCCAGTCGATCGGCGCGATCGTGC TGCCGCTGATGCTCTTCCATCAGATCCAGCTTATGGTCTGCGCCGTCATCGCCCAGAAATACGCCGCCGCCGCGGCCCGC CGCGCAACAGAAAAGGAAATAGATGAAGCCGCCAGCCCGGCCTGA
Upstream 100 bases:
>100_bases AGGTCCAGCATGATCCAATTTCTTGATAACTGTTATTTCTTGCATCGTGGATCATAATGGACGACAAAACAACGACTATC TGTCACGCCGCGAGACCGTC
Downstream 100 bases:
>100_bases ACCCATTGCCGCAATAAAAAACGGCGCCCCGATCGGAGCGCCGTTTTTTTTCTTAAGCGATGTGATTAGCCGTTGATGAC CTGCGCCTCGATGGCCTTCG
Product: sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR RATEKEIDEAASPA
Sequences:
>Translated_334_residues MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR RATEKEIDEAASPA >Mature_334_residues MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR RATEKEIDEAASPA
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=341, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=8e-25, Organism=Escherichia coli, GI1788749, Length=328, Percent_Identity=53.9634146341463, Blast_Score=325, Evalue=3e-90, Organism=Saccharomyces cerevisiae, GI6323677, Length=320, Percent_Identity=23.4375, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35653; Mature: 35653
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHWRLHLVILLTTFGIFPLLGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHC AGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFSFDALQQILLQLLAPFIVGQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFH HHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH QIQLMVCAVIAQKYAAAAARRATEKEIDEAASPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAG CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHWRLHLVILLTTFGIFPLLGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHC AGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFSFDALQQILLQLLAPFIVGQI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFH HHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH QIQLMVCAVIAQKYAAAAARRATEKEIDEAASPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]