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The map label for this gene is tse [H]

Identifier: 209550838

GI number: 209550838

Start: 3352890

End: 3354599

Strand: Reverse

Name: tse [H]

Synonym: Rleg2_3262

Alternate gene names: 209550838

Gene position: 3354599-3352890 (Counterclockwise)

Preceding gene: 209550839

Following gene: 209550837

Centisome position: 73.92

GC content: 63.39

Gene sequence:

>1710_bases
ATGCGAATGACAATAAAGACGAAACTGGTGACGGCGTTCACCTTTATCATTCTGATGCTGGTGGGTACCGCCGCCTACGG
TGTCCTCAGCCTTGGATCGCTGAACGACACGATCGATAGACTTCTCTCCGGCCCGGCAGCCCGTCTCGATCTCGCGCAGC
AGATCAACATTGCCCAGCTCGAGGCCATCCGCCAGCAGAAGAACCTGCTCACCGCCCGGACCGCGGATGAGACGGCCGGT
TCGATCGCAAAGGGCGATCAGGCCCGCAAGGACTTCGCCGACGCTTTCGGCCAGGTGCTGGCGCTGGCAACGGAAGAGGG
CAAGGCGCGCTGGGCGCGCATCGCCGGGCTTTCCAAGACGTTCAATGCAGCCGACGATCAGATCCGCGACTATGTGAAAG
CCGGCAATGCCGAAGGCGCGAATACGATTTCCGTTACCACGGCGCGGGCTGCTGCCAACGACATCGACGCAACGCTCAGC
GAAATCCTGACCCTTGAAAAGCAGCGCATGAAGGCTGCCGACGACGGTGCCGAAGCGCAATATATGACGACACGCATGAC
GATGGTTGCGGTGGCCGCCGCAGCGCTGCTGATCGCCGCCGTCACCGCCTTCTGGATTGCCAACTCGATCAGCAAGGGCC
TCAACCGCGCCAACAATGTGGTGCGCGAAGTGTCGGAAGGCGATCTGACGAAGGTGGCCGATATCACCAGCCACGATGAA
ATCGGCGCGCTTCTGGGCAACGTCAACACGATGATCGAACGCCTGCGCGGTGTCGTCGCCGACGCCTTGTCGGCTGCCGA
CAACGTCTCTTCCGGCAGCCAGCAGCTTTCGGCAAGTTCGGAACAGGTGTCGCAGGGCGCCACCGAACAGGCCGCTTCGG
CTGAAGAGGCCTCCGCTTCGATGGAGCAAATGGCCGCCAACATCAAGCAGAATGCCGATAATGCCGCGCAGACGGAAAAG
ATCGCCCGCCAGTCGGCCAAGGATGCCGAGATGAGCGGTGAGGCGGTGACACGCGCTGTCGACGCCATGCGCACGATCGC
CCAGAAGATCAGCATCGTCCAGGAAATCGCCCGCCAGACCGATCTGCTGGCGCTCAATGCCGCCGTCGAGGCGGCGCGTG
CCGGCGAACACGGCAAGGGTTTTGCGGTCGTCGCTTCGGAAGTGCGCAAGCTTGCCGAACGCAGCCAGTCGGCCGCCGCC
GAAATCAGCTCGATGTCGAGCGATACGGTCAAGGCTGCAGCCGATGCCGGCGACATGCTCAGCCGGCTGGTGCCCGATAT
CCGCAAGACGGCCGAGCTGGTCTCCGAGATCAGTGCGGCCTGCCGCGAACAGGATATCGGCGCCTCGCAGATCAACGAAG
CGATCCAGCAGCTGGACAAGGTGACGCAGCAGAATGCCGGCGCTTCCGAGCAGATGTCTGCGACCTCGGAAGAACTCGCG
AGCCAGGCGGAGGAACTGCAGACCTCGATCGCCTTCTTCAAGGTCGATACGGCGGGCAGCGTGCGGCCCGACGCCCGCAA
GGTGCAGCCAAAAGCTTCGCCCAAGGGTCTCCAGTCCCCTGCCTCTGCCCGCAAGCCCGCTCCGCAAGCCTACGGACAGG
GCCGCGGCCAGACGGTTTCGGCTCAGCAGCAGCGTCTCAAGGGCTTTGCCCTCGACATGTCGATGGGCGGTCCAGACGCC
GGCGATGACGACTTCAGGGAGAGCGCATAG

Upstream 100 bases:

>100_bases
TCATCATTCTCCCGAATCTCCAGGCCATTTTTTCATCGAGGCATAAGGCGGCGGGAGCCGCCAGTTGAGGCCGGATGAAT
TCAAACTTGGGGGTTTGACG

Downstream 100 bases:

>100_bases
CGCTTTCGCCAATGTGATCCTCGGGTTGCCCCAGCGACCCGAGGCGGGAATATCCCCCAACGCGTGTAGGCGTTGGTGCT
GCGATCGATAGATGTCGGCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MRMTIKTKLVTAFTFIILMLVGTAAYGVLSLGSLNDTIDRLLSGPAARLDLAQQINIAQLEAIRQQKNLLTARTADETAG
SIAKGDQARKDFADAFGQVLALATEEGKARWARIAGLSKTFNAADDQIRDYVKAGNAEGANTISVTTARAAANDIDATLS
EILTLEKQRMKAADDGAEAQYMTTRMTMVAVAAAALLIAAVTAFWIANSISKGLNRANNVVREVSEGDLTKVADITSHDE
IGALLGNVNTMIERLRGVVADALSAADNVSSGSQQLSASSEQVSQGATEQAASAEEASASMEQMAANIKQNADNAAQTEK
IARQSAKDAEMSGEAVTRAVDAMRTIAQKISIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAA
EISSMSSDTVKAAADAGDMLSRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEQMSATSEELA
SQAEELQTSIAFFKVDTAGSVRPDARKVQPKASPKGLQSPASARKPAPQAYGQGRGQTVSAQQQRLKGFALDMSMGGPDA
GDDDFRESA

Sequences:

>Translated_569_residues
MRMTIKTKLVTAFTFIILMLVGTAAYGVLSLGSLNDTIDRLLSGPAARLDLAQQINIAQLEAIRQQKNLLTARTADETAG
SIAKGDQARKDFADAFGQVLALATEEGKARWARIAGLSKTFNAADDQIRDYVKAGNAEGANTISVTTARAAANDIDATLS
EILTLEKQRMKAADDGAEAQYMTTRMTMVAVAAAALLIAAVTAFWIANSISKGLNRANNVVREVSEGDLTKVADITSHDE
IGALLGNVNTMIERLRGVVADALSAADNVSSGSQQLSASSEQVSQGATEQAASAEEASASMEQMAANIKQNADNAAQTEK
IARQSAKDAEMSGEAVTRAVDAMRTIAQKISIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAA
EISSMSSDTVKAAADAGDMLSRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEQMSATSEELA
SQAEELQTSIAFFKVDTAGSVRPDARKVQPKASPKGLQSPASARKPAPQAYGQGRGQTVSAQQQRLKGFALDMSMGGPDA
GDDDFRESA
>Mature_569_residues
MRMTIKTKLVTAFTFIILMLVGTAAYGVLSLGSLNDTIDRLLSGPAARLDLAQQINIAQLEAIRQQKNLLTARTADETAG
SIAKGDQARKDFADAFGQVLALATEEGKARWARIAGLSKTFNAADDQIRDYVKAGNAEGANTISVTTARAAANDIDATLS
EILTLEKQRMKAADDGAEAQYMTTRMTMVAVAAAALLIAAVTAFWIANSISKGLNRANNVVREVSEGDLTKVADITSHDE
IGALLGNVNTMIERLRGVVADALSAADNVSSGSQQLSASSEQVSQGATEQAASAEEASASMEQMAANIKQNADNAAQTEK
IARQSAKDAEMSGEAVTRAVDAMRTIAQKISIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAA
EISSMSSDTVKAAADAGDMLSRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEQMSATSEELA
SQAEELQTSIAFFKVDTAGSVRPDARKVQPKASPKGLQSPASARKPAPQAYGQGRGQTVSAQQQRLKGFALDMSMGGPDA
GDDDFRESA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=373, Percent_Identity=36.1930294906166, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1788194, Length=425, Percent_Identity=31.5294117647059, Blast_Score=179, Evalue=5e-46,
Organism=Escherichia coli, GI2367378, Length=331, Percent_Identity=36.5558912386707, Blast_Score=178, Evalue=7e-46,
Organism=Escherichia coli, GI1788195, Length=318, Percent_Identity=35.8490566037736, Blast_Score=168, Evalue=1e-42,
Organism=Escherichia coli, GI1789453, Length=317, Percent_Identity=34.0694006309148, Blast_Score=145, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 59725; Mature: 59725

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTIKTKLVTAFTFIILMLVGTAAYGVLSLGSLNDTIDRLLSGPAARLDLAQQINIAQL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHH
EAIRQQKNLLTARTADETAGSIAKGDQARKDFADAFGQVLALATEEGKARWARIAGLSKT
HHHHHHHHHHHHHCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAADDQIRDYVKAGNAEGANTISVTTARAAANDIDATLSEILTLEKQRMKAADDGAEAQ
HCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YMTTRMTMVAVAAAALLIAAVTAFWIANSISKGLNRANNVVREVSEGDLTKVADITSHDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHH
IGALLGNVNTMIERLRGVVADALSAADNVSSGSQQLSASSEQVSQGATEQAASAEEASAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHH
MEQMAANIKQNADNAAQTEKIARQSAKDAEMSGEAVTRAVDAMRTIAQKISIVQEIARQT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEISSMSSDTVKAAADAGDML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEQMSATSEELA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SQAEELQTSIAFFKVDTAGSVRPDARKVQPKASPKGLQSPASARKPAPQAYGQGRGQTVS
HHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCH
AQQQRLKGFALDMSMGGPDAGDDDFRESA
HHHHHHHHHEEEECCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRMTIKTKLVTAFTFIILMLVGTAAYGVLSLGSLNDTIDRLLSGPAARLDLAQQINIAQL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHH
EAIRQQKNLLTARTADETAGSIAKGDQARKDFADAFGQVLALATEEGKARWARIAGLSKT
HHHHHHHHHHHHHCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAADDQIRDYVKAGNAEGANTISVTTARAAANDIDATLSEILTLEKQRMKAADDGAEAQ
HCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YMTTRMTMVAVAAAALLIAAVTAFWIANSISKGLNRANNVVREVSEGDLTKVADITSHDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHH
IGALLGNVNTMIERLRGVVADALSAADNVSSGSQQLSASSEQVSQGATEQAASAEEASAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHH
MEQMAANIKQNADNAAQTEKIARQSAKDAEMSGEAVTRAVDAMRTIAQKISIVQEIARQT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEISSMSSDTVKAAADAGDML
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SRLVPDIRKTAELVSEISAACREQDIGASQINEAIQQLDKVTQQNAGASEQMSATSEELA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
SQAEELQTSIAFFKVDTAGSVRPDARKVQPKASPKGLQSPASARKPAPQAYGQGRGQTVS
HHHHHHHHHHHHEEECCCCCCCCCHHHCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCCH
AQQQRLKGFALDMSMGGPDAGDDDFRESA
HHHHHHHHHEEEECCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]