Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 209550837

GI number: 209550837

Start: 3350751

End: 3352673

Strand: Reverse

Name: trg [C]

Synonym: Rleg2_3261

Alternate gene names: 209550837

Gene position: 3352673-3350751 (Counterclockwise)

Preceding gene: 209550838

Following gene: 209550836

Centisome position: 73.88

GC content: 61.41

Gene sequence:

>1923_bases
ATGCGTTTCACCATCAAACTCAAACTGGGCCTTGCCTTCGGCATCATGACGCTGCTGCTGATCGGCATCGCCGTCTACGG
AAGCATGAGTCTCGGGACTTTGAATGATGCAAGCGGCCAGATGATCAACGGCTCAGTCCGTCGTCTGGAGCTGGCACTGA
CCGCCAATGTTGCCGAAGTCAACGCCATTCGTTCCCAGAAGAACGCACTTCTCTCCACCGATCCCGAAACTGCTGCCGGT
TTCTATAGGGACGCCGACCAATACCTGCAGGAGATGTTCGGCGCCGTCGACAGCGGTCTTGCCATCGCCTTGCCGGAGGG
GAAGCCATATTGGGAGAAGTTGCAGACGATCGGCGCGAAGTTCCGCGAAAGATCCGCCGAACTGCAGCAACTTGACGCAA
AAGGTGACCAAGCCGGCGCGCTGGCCCTTTCACTGGGTGACCTGAGAACAATGACCGACGATATGGGCGCTGCAATCGCG
GCTCTCGTCGAAATCCAGCGCAAAGGAATGAAGGCGACCGCTGCTTCAAACACTGAGCTCTATGGCTCGACCAAGCTGAT
CCTCGGCAGTGCTTCCGGCATTGCAGTGCTCATCGCGCTCGGCGCCGCCTTGTGGATTACCCTTGGTATCAACAATGGTC
TGCGAAAGATCACGATGGTCGCAAACGCCGTCGCAATCGGTGACCTCAACCAGAAAGTCGATGTCAAGACCAACGACGAG
ATCAAGGATCTTATCGATACGGTGAACGCCATGACCACCAATCTGCGCGCCACGGCGGCCCTTGCCGACCAGATCGCAAT
GGGTGACCTCAGCACCGATGCAAAGCCGCTTTCGGACAAAGATGCGCTCGGCATCGCCATGCAGAGCATGATCTCCAACC
TTAGAACCACCGCCGGCATCGCCGATCAGATCGCAAACGGCGACCTGACGGTGTCCCCGAAGCCACTCTCCGACAAGGAT
GCGCTTGGCCTCGCCCTGGAGCAGATGGTCGAGCGCCTGCGCGGCGTCGTTGCCGATGCGATCTCAGCGGCGGAAAATGT
CTCTTCCGGCAGCCAGGAGCTTTCAGCAAGCTCCGAGCAGGTATCGCAGGGCGCTACCGAACAGGCGGCTTCCGCCGAAG
AAGCTTCTGCCTCGATGGAAGAGATGGCGTCGAACATCAAGCAGAATGCCGATAATGCGGCCCAGACGGAAAAGATTGCT
CGCCAGTCGGCAAAGGATGCGGAAGCCAGCGGCGAGGCCGTTTCCCGGGCCGTCGATGCCATGCGCACGATCGCCCAGAA
GATCGGCATCGTCCAGGAGATCGCCCGCCAGACCGATCTGCTGGCTCTCAATGCCGCCGTGGAAGCGGCGCGTGCCGGTG
AACACGGCAAGGGCTTTGCGGTCGTGGCCTCCGAGGTGCGCAAGCTTGCCGAACGCAGCCAGTCGGCGGCAGCCGAAATC
AGCTCGATGTCGAGCGATACGGTAACGGCCGCTCAGGAAGCGGGCGAAATGCTCGGCCGCCTGGTGCCGGACATCCGCAA
GACGGCCGAGCTGGTTTCCGAGATCAGTGCGGCCTGCCGTGAACAGGATATCGGCGCGGCGCAGATTAACGAGGCGATCC
AGCAGCTCGACAAGGTAACCCAGCAGAACGCCGGCGCCTCCGAGCAAATGTCTGCAACCTCGGAAGAGCTTGCGAGCCAA
GCCGAAGAGCTACAGACGTCGATCGCTTTCTTCAAGGTCGATATGGCGGGCGGACGCCGTGAGCGCGCGCCGGTGGCAAA
GGCTGTCGCCCGCAGCCGGCCTCAGGCCGCCCCGCGCAAGCCGGCCACCAAGTCGCCGGTCAATACGGTCGTCGGCCAGC
AGGCCCGCGTGAAGGGGTTTGCGCTCGACATGTCGATGGGCGGTCCCGACACCGTGGATGACGAGTTTAGGGAGCGCGCG
TAG

Upstream 100 bases:

>100_bases
AGTCGCTTGTCCCCTTTCAGACACATCCTTCCAAGCTCGACGTCCCGCCAGGGGGACATGTCTCTCTCCATTCGTTTTGA
CCGCAAATCGGGGGTATCAC

Downstream 100 bases:

>100_bases
CGCCGCCTCTGGGGAAAGCTTGGGCACTCCCCCTCACAGCTGTCGCGGGCCGGCTAGCATGGCCGCGGCGTAGGTTTCCG
GCGCTTGCCGGGCGCCGGAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MRFTIKLKLGLAFGIMTLLLIGIAVYGSMSLGTLNDASGQMINGSVRRLELALTANVAEVNAIRSQKNALLSTDPETAAG
FYRDADQYLQEMFGAVDSGLAIALPEGKPYWEKLQTIGAKFRERSAELQQLDAKGDQAGALALSLGDLRTMTDDMGAAIA
ALVEIQRKGMKATAASNTELYGSTKLILGSASGIAVLIALGAALWITLGINNGLRKITMVANAVAIGDLNQKVDVKTNDE
IKDLIDTVNAMTTNLRATAALADQIAMGDLSTDAKPLSDKDALGIAMQSMISNLRTTAGIADQIANGDLTVSPKPLSDKD
ALGLALEQMVERLRGVVADAISAAENVSSGSQELSASSEQVSQGATEQAASAEEASASMEEMASNIKQNADNAAQTEKIA
RQSAKDAEASGEAVSRAVDAMRTIAQKIGIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEI
SSMSSDTVTAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGAAQINEAIQQLDKVTQQNAGASEQMSATSEELASQ
AEELQTSIAFFKVDMAGGRRERAPVAKAVARSRPQAAPRKPATKSPVNTVVGQQARVKGFALDMSMGGPDTVDDEFRERA

Sequences:

>Translated_640_residues
MRFTIKLKLGLAFGIMTLLLIGIAVYGSMSLGTLNDASGQMINGSVRRLELALTANVAEVNAIRSQKNALLSTDPETAAG
FYRDADQYLQEMFGAVDSGLAIALPEGKPYWEKLQTIGAKFRERSAELQQLDAKGDQAGALALSLGDLRTMTDDMGAAIA
ALVEIQRKGMKATAASNTELYGSTKLILGSASGIAVLIALGAALWITLGINNGLRKITMVANAVAIGDLNQKVDVKTNDE
IKDLIDTVNAMTTNLRATAALADQIAMGDLSTDAKPLSDKDALGIAMQSMISNLRTTAGIADQIANGDLTVSPKPLSDKD
ALGLALEQMVERLRGVVADAISAAENVSSGSQELSASSEQVSQGATEQAASAEEASASMEEMASNIKQNADNAAQTEKIA
RQSAKDAEASGEAVSRAVDAMRTIAQKIGIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEI
SSMSSDTVTAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGAAQINEAIQQLDKVTQQNAGASEQMSATSEELASQ
AEELQTSIAFFKVDMAGGRRERAPVAKAVARSRPQAAPRKPATKSPVNTVVGQQARVKGFALDMSMGGPDTVDDEFRERA
>Mature_640_residues
MRFTIKLKLGLAFGIMTLLLIGIAVYGSMSLGTLNDASGQMINGSVRRLELALTANVAEVNAIRSQKNALLSTDPETAAG
FYRDADQYLQEMFGAVDSGLAIALPEGKPYWEKLQTIGAKFRERSAELQQLDAKGDQAGALALSLGDLRTMTDDMGAAIA
ALVEIQRKGMKATAASNTELYGSTKLILGSASGIAVLIALGAALWITLGINNGLRKITMVANAVAIGDLNQKVDVKTNDE
IKDLIDTVNAMTTNLRATAALADQIAMGDLSTDAKPLSDKDALGIAMQSMISNLRTTAGIADQIANGDLTVSPKPLSDKD
ALGLALEQMVERLRGVVADAISAAENVSSGSQELSASSEQVSQGATEQAASAEEASASMEEMASNIKQNADNAAQTEKIA
RQSAKDAEASGEAVSRAVDAMRTIAQKIGIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEI
SSMSSDTVTAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGAAQINEAIQQLDKVTQQNAGASEQMSATSEELASQ
AEELQTSIAFFKVDMAGGRRERAPVAKAVARSRPQAAPRKPATKSPVNTVVGQQARVKGFALDMSMGGPDTVDDEFRERA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=301, Percent_Identity=38.5382059800665, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=38.013698630137, Blast_Score=171, Evalue=2e-43,
Organism=Escherichia coli, GI2367378, Length=340, Percent_Identity=38.2352941176471, Blast_Score=169, Evalue=5e-43,
Organism=Escherichia coli, GI1788195, Length=320, Percent_Identity=34.0625, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1789453, Length=293, Percent_Identity=34.1296928327645, Blast_Score=136, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67058; Mature: 67058

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTIKLKLGLAFGIMTLLLIGIAVYGSMSLGTLNDASGQMINGSVRRLELALTANVAEV
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHEEEHHHCCHHHH
NAIRSQKNALLSTDPETAAGFYRDADQYLQEMFGAVDSGLAIALPEGKPYWEKLQTIGAK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
FRERSAELQQLDAKGDQAGALALSLGDLRTMTDDMGAAIAALVEIQRKGMKATAASNTEL
HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEE
YGSTKLILGSASGIAVLIALGAALWITLGINNGLRKITMVANAVAIGDLNQKVDVKTNDE
CCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
IKDLIDTVNAMTTNLRATAALADQIAMGDLSTDAKPLSDKDALGIAMQSMISNLRTTAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ADQIANGDLTVSPKPLSDKDALGLALEQMVERLRGVVADAISAAENVSSGSQELSASSEQ
HHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH
VSQGATEQAASAEEASASMEEMASNIKQNADNAAQTEKIARQSAKDAEASGEAVSRAVDA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHH
MRTIAQKIGIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSMSSDTVTAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGAAQINEAIQQLDKVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QQNAGASEQMSATSEELASQAEELQTSIAFFKVDMAGGRRERAPVAKAVARSRPQAAPRK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
PATKSPVNTVVGQQARVKGFALDMSMGGPDTVDDEFRERA
CCCCCCHHHHHCCHHHHCEEEEEECCCCCCCCCHHHHHCC
>Mature Secondary Structure
MRFTIKLKLGLAFGIMTLLLIGIAVYGSMSLGTLNDASGQMINGSVRRLELALTANVAEV
CEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHEEEHHHCCHHHH
NAIRSQKNALLSTDPETAAGFYRDADQYLQEMFGAVDSGLAIALPEGKPYWEKLQTIGAK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
FRERSAELQQLDAKGDQAGALALSLGDLRTMTDDMGAAIAALVEIQRKGMKATAASNTEL
HHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEE
YGSTKLILGSASGIAVLIALGAALWITLGINNGLRKITMVANAVAIGDLNQKVDVKTNDE
CCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH
IKDLIDTVNAMTTNLRATAALADQIAMGDLSTDAKPLSDKDALGIAMQSMISNLRTTAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ADQIANGDLTVSPKPLSDKDALGLALEQMVERLRGVVADAISAAENVSSGSQELSASSEQ
HHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH
VSQGATEQAASAEEASASMEEMASNIKQNADNAAQTEKIARQSAKDAEASGEAVSRAVDA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCHHHHHHHHHH
MRTIAQKIGIVQEIARQTDLLALNAAVEAARAGEHGKGFAVVASEVRKLAERSQSAAAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSMSSDTVTAAQEAGEMLGRLVPDIRKTAELVSEISAACREQDIGAAQINEAIQQLDKVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
QQNAGASEQMSATSEELASQAEELQTSIAFFKVDMAGGRRERAPVAKAVARSRPQAAPRK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCC
PATKSPVNTVVGQQARVKGFALDMSMGGPDTVDDEFRERA
CCCCCCHHHHHCCHHHHCEEEEEECCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]