| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is suhB [H]
Identifier: 209550832
GI number: 209550832
Start: 3345258
End: 3346058
Strand: Reverse
Name: suhB [H]
Synonym: Rleg2_3256
Alternate gene names: 209550832
Gene position: 3346058-3345258 (Counterclockwise)
Preceding gene: 209550833
Following gene: 209550831
Centisome position: 73.74
GC content: 65.04
Gene sequence:
>801_bases ATGGCCCGTTCAGCTCTTCTCAATGTCATGGTTCAGGCTGCCCTCAAGGCAGGAAAATCGCTGGGGCGTGATTTCGGTGA AGTGCAGAACCTGCAGGTTTCGGTGAAGGGACCGGGCGACTTTGTTTCCACCGCCGACCGCAAGGCCGAGAAGATTGTCA GGGAAGAACTGCTCAAGGCGCGTCCGACCTATGGCTTCCTCGGCGAGGAAAGCGAGGAGATCAAGGGCACGGACGGCGCG CATCGCTGGATCGTCGATCCGCTTGACGGCACCACGAACTTCCTGCACGGCATCCCGGCCTTCGCCGTCTCGATCGCGCT CGAACGCAATGGCGAGATCGTCGCCGCCGTCATCTTCAATCCGGCGACCGACGAACTCTATACCGCCGAGCGCGGCGGCG GCGCCTTCCTCAACGACCGGCGCCTGCGCGTCGCCGCACGTCGCGCGCTGTCGGATTGCGTCATCGGCTGCGGCGTGCCG GCGCTCGGCAAGCGCAATCATGGCAAGTTCCTGGTCGAGCTTCGCCACGTGATGGGCGAAGTGGCGGGCATCCGCCGCGT GGGATCGCCGACGCTCGATCTCGCCTATGTCGCCGCCGGGCGTTTCGACGGTTTCTGGGAAGCCGAGCTTGCGCCGTGGG ACATGGCGGCCGGCATCCTGCTCATCCGCGAAGCCGGCGGATTTGCCACCGATTGGGACGGCGGGACGGCCATTCTGGAG AGCGGCGCGATCGTCGCCGGCAACGAAGCCATCCACAAGGCGCTGATCGAAGTGGTCAAGCGGCCAATTCCCGCCAAGTG A
Upstream 100 bases:
>100_bases GAGGCCGCCAATCTTTGCAGCGCTGCCTGTCATGCAAGTTCAGGGACACTTCCCGCCCCTGGCAGCGCGCACCCCGTATC AGTCCCAAGGAAATGCGCCG
Downstream 100 bases:
>100_bases GCGGACGAAAATCCGGCTGTTGTAAAGTCACGGTTTTCGCCTCGGCATACTTCAATTCGGCACAATGTTGCTCTAGTCTC CGCCAGCAATGACTCCGGAG
Product: inositol-phosphate phosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MARSALLNVMVQAALKAGKSLGRDFGEVQNLQVSVKGPGDFVSTADRKAEKIVREELLKARPTYGFLGEESEEIKGTDGA HRWIVDPLDGTTNFLHGIPAFAVSIALERNGEIVAAVIFNPATDELYTAERGGGAFLNDRRLRVAARRALSDCVIGCGVP ALGKRNHGKFLVELRHVMGEVAGIRRVGSPTLDLAYVAAGRFDGFWEAELAPWDMAAGILLIREAGGFATDWDGGTAILE SGAIVAGNEAIHKALIEVVKRPIPAK
Sequences:
>Translated_266_residues MARSALLNVMVQAALKAGKSLGRDFGEVQNLQVSVKGPGDFVSTADRKAEKIVREELLKARPTYGFLGEESEEIKGTDGA HRWIVDPLDGTTNFLHGIPAFAVSIALERNGEIVAAVIFNPATDELYTAERGGGAFLNDRRLRVAARRALSDCVIGCGVP ALGKRNHGKFLVELRHVMGEVAGIRRVGSPTLDLAYVAAGRFDGFWEAELAPWDMAAGILLIREAGGFATDWDGGTAILE SGAIVAGNEAIHKALIEVVKRPIPAK >Mature_265_residues ARSALLNVMVQAALKAGKSLGRDFGEVQNLQVSVKGPGDFVSTADRKAEKIVREELLKARPTYGFLGEESEEIKGTDGAH RWIVDPLDGTTNFLHGIPAFAVSIALERNGEIVAAVIFNPATDELYTAERGGGAFLNDRRLRVAARRALSDCVIGCGVPA LGKRNHGKFLVELRHVMGEVAGIRRVGSPTLDLAYVAAGRFDGFWEAELAPWDMAAGILLIREAGGFATDWDGGTAILES GAIVAGNEAIHKALIEVVKRPIPAK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=247, Percent_Identity=33.6032388663968, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI5031789, Length=259, Percent_Identity=32.4324324324324, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI221625487, Length=256, Percent_Identity=32.421875, Blast_Score=128, Evalue=7e-30, Organism=Homo sapiens, GI221625507, Length=170, Percent_Identity=33.5294117647059, Blast_Score=97, Evalue=1e-20, Organism=Escherichia coli, GI1788882, Length=251, Percent_Identity=43.8247011952191, Blast_Score=215, Evalue=2e-57, Organism=Caenorhabditis elegans, GI193202570, Length=242, Percent_Identity=33.8842975206612, Blast_Score=123, Evalue=1e-28, Organism=Caenorhabditis elegans, GI193202572, Length=236, Percent_Identity=32.2033898305085, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6320493, Length=201, Percent_Identity=36.318407960199, Blast_Score=132, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6321836, Length=203, Percent_Identity=33.4975369458128, Blast_Score=115, Evalue=6e-27, Organism=Drosophila melanogaster, GI21357957, Length=265, Percent_Identity=34.3396226415094, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24664918, Length=262, Percent_Identity=33.206106870229, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24664922, Length=266, Percent_Identity=31.5789473684211, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI24664926, Length=227, Percent_Identity=29.9559471365639, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI21357329, Length=268, Percent_Identity=29.8507462686567, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI21357303, Length=210, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28426; Mature: 28295
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSALLNVMVQAALKAGKSLGRDFGEVQNLQVSVKGPGDFVSTADRKAEKIVREELLKA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC RPTYGFLGEESEEIKGTDGAHRWIVDPLDGTTNFLHGIPAFAVSIALERNGEIVAAVIFN CCCCCCCCCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEEC PATDELYTAERGGGAFLNDRRLRVAARRALSDCVIGCGVPALGKRNHGKFLVELRHVMGE CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VAGIRRVGSPTLDLAYVAAGRFDGFWEAELAPWDMAAGILLIREAGGFATDWDGGTAILE HHHHHHCCCCCHHHHEEECCCCCCCEECCCCCHHHHCCEEEEEECCCCCCCCCCCHHHHC SGAIVAGNEAIHKALIEVVKRPIPAK CCCEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARSALLNVMVQAALKAGKSLGRDFGEVQNLQVSVKGPGDFVSTADRKAEKIVREELLKA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC RPTYGFLGEESEEIKGTDGAHRWIVDPLDGTTNFLHGIPAFAVSIALERNGEIVAAVIFN CCCCCCCCCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEEC PATDELYTAERGGGAFLNDRRLRVAARRALSDCVIGCGVPALGKRNHGKFLVELRHVMGE CCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH VAGIRRVGSPTLDLAYVAAGRFDGFWEAELAPWDMAAGILLIREAGGFATDWDGGTAILE HHHHHHCCCCCHHHHEEECCCCCCCEECCCCCHHHHCCEEEEEECCCCCCCCCCCHHHHC SGAIVAGNEAIHKALIEVVKRPIPAK CCCEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]