| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550800
Identifier: 209550800
GI number: 209550800
Start: 3310624
End: 3311187
Strand: Direct
Name: 209550800
Synonym: Rleg2_3224
Alternate gene names: NA
Gene position: 3310624-3311187 (Clockwise)
Preceding gene: 209550799
Following gene: 209550803
Centisome position: 72.95
GC content: 61.7
Gene sequence:
>564_bases ATGCCGACCTTCGATCCCATCAGGTCATTTCGCAAGCTCGCCTATAACAACGCTCTTGCCAACCACCGTCTGCTTCAGGC CTGCGCGGCATTAAGGCCGGGCGAATTCGAAGCGCCGCGTACCAGCTTCTTCCCCTCGATCAAGGAAACCTTGAACCACA TCATTACGGTCGACTGGTTTTATGTCGACGGCCTGGAAGGCGGCACACTCGGCTACCAGGCCTTCGAGATCGACGAACCG TTCGATGATATTTCATCGCTGGCGCAAGCGCAGGCGAAGGTCGATCAGCGCGTGGTCGCACTTTGCGAGGCTCTGACGCC GGAAAAGCTGGTGTCGACCGTCCGCCTCCACCGCGGCGACCGCATCCAGGAGGAGCGGATGGACGACGTCTTCGCCCACC TCTTCCAGCACCAGACCCATCATCGCGGCCAGGTGCATGCGATGCTCTCCGGCACCAGCGTCGCTCCGCCGCAGCTCGAC GAGTTCATCGTCGCCGACGACGCCCAGTTCCGCGGCGAGGAGCTCGCCGGGCTCGACTGGAGCGAAGAAATGCTGATGCG TTAA
Upstream 100 bases:
>100_bases CCTGCCCACAGCACCCCGTCATCTCGTCTGGCGGGACGGCAATCTCGATGAGAAGAACTGACGTAAGCCAGTCCAAGACA CGTTAAGAGGAGATGCGCCG
Downstream 100 bases:
>100_bases TTCTGCAGCCGCTTTTTCAGCCCGTCGATGATCATCTTGGTGAGAAGATCGTAATTCTCGTCGAAGTGATGGTCGCCGGG CAGTTCGATCACCTCGGCGC
Product: DinB family protein
Products: NA
Alternate protein names: Damage Inducible Protein; Nuclease Inhibitor; DinB Family
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPTFDPIRSFRKLAYNNALANHRLLQACAALRPGEFEAPRTSFFPSIKETLNHIITVDWFYVDGLEGGTLGYQAFEIDEP FDDISSLAQAQAKVDQRVVALCEALTPEKLVSTVRLHRGDRIQEERMDDVFAHLFQHQTHHRGQVHAMLSGTSVAPPQLD EFIVADDAQFRGEELAGLDWSEEMLMR
Sequences:
>Translated_187_residues MPTFDPIRSFRKLAYNNALANHRLLQACAALRPGEFEAPRTSFFPSIKETLNHIITVDWFYVDGLEGGTLGYQAFEIDEP FDDISSLAQAQAKVDQRVVALCEALTPEKLVSTVRLHRGDRIQEERMDDVFAHLFQHQTHHRGQVHAMLSGTSVAPPQLD EFIVADDAQFRGEELAGLDWSEEMLMR >Mature_186_residues PTFDPIRSFRKLAYNNALANHRLLQACAALRPGEFEAPRTSFFPSIKETLNHIITVDWFYVDGLEGGTLGYQAFEIDEPF DDISSLAQAQAKVDQRVVALCEALTPEKLVSTVRLHRGDRIQEERMDDVFAHLFQHQTHHRGQVHAMLSGTSVAPPQLDE FIVADDAQFRGEELAGLDWSEEMLMR
Specific function: Unknown
COG id: COG2318
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21197; Mature: 21066
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFDPIRSFRKLAYNNALANHRLLQACAALRPGEFEAPRTSFFPSIKETLNHIITVDWF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHEEHEEE YVDGLEGGTLGYQAFEIDEPFDDISSLAQAQAKVDQRVVALCEALTPEKLVSTVRLHRGD EEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC RIQEERMDDVFAHLFQHQTHHRGQVHAMLSGTSVAPPQLDEFIVADDAQFRGEELAGLDW CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCHHCCCHHCCCCC SEEMLMR HHHHHCC >Mature Secondary Structure PTFDPIRSFRKLAYNNALANHRLLQACAALRPGEFEAPRTSFFPSIKETLNHIITVDWF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHEEHEEE YVDGLEGGTLGYQAFEIDEPFDDISSLAQAQAKVDQRVVALCEALTPEKLVSTVRLHRGD EEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC RIQEERMDDVFAHLFQHQTHHRGQVHAMLSGTSVAPPQLDEFIVADDAQFRGEELAGLDW CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCHHCCCHHCCCCC SEEMLMR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA