| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is catB [H]
Identifier: 209550497
GI number: 209550497
Start: 2976597
End: 2977712
Strand: Reverse
Name: catB [H]
Synonym: Rleg2_2920
Alternate gene names: 209550497
Gene position: 2977712-2976597 (Counterclockwise)
Preceding gene: 209550498
Following gene: 209550496
Centisome position: 65.62
GC content: 63.8
Gene sequence:
>1116_bases ATGAGCGAACTCAAAATCGAAAAAATCGATGTCTTCCAGGTCGACCTGCCCTATTCGGGCGGCGTCTACCGCCTGTCGGG CGGCAGGGAATATAGAAGCTTCGATGCGACGATCGTCAGGATCACGACGCAGAACGGGCTGGAAGGATGGGGCGAGAGCA CGCCGTTCGGCTCGACCTATATCGCCTCTCACGCGCTCGGCGTGCGCGCCGGCATTGCGGAAATCGCGCAGAGCCTGATC GGGCTCGATCCCCGCCGCGTCGACCGCGTCAATGACGCCATGGACAATGCGCTGCTCGGACATCTGCACGCCAAGACCGC GCTCGACGTCGCCTGCTGGGATTTGTTCGGCAAATCGGTCGGTCTGCCGGTCTGCGAGTTGCTCGGCGGCCGCACCGATG TCCAGATGCCGGTGATCTCGTCGATCTATATGGGCGATCCGGATGATATGCGCCGGCGCGTCGCCGAGCATCGCCAGCTC GGTTACCTCGCCCATTCGGTCAAGATCGGCGACGAGCCGGCCATCGATGCCGCCAGAATTGCCGCCTCGCTCGCCGATAA GCGGCCCGGCGAATTCTTCATCGTCGATGCCAATGGCGGCATGACCGTGGAGACCGCGCTGCGCATGCTGCGGCTCTTAC CGGCCGGGCTCGATTTCGTGCTCGAGGCCCCTTGCGCGACCTGGCGCGAATGCATGTCGCTGCGCCGGCGCACGGATGTG CCGATCATCTTCGATGAATTGGCGACGGATGATGCAGCGATTGCCCAGCTTGTCAGTGACGATGCCGCCGAAGGTATCGG CCTGAAGATTTCCAAGAATGGCGGGCTGACCCGGGGCCGCCGTCATCGCGATATCTCGGTCGCAGCCGGCTACACCGTCA GCGTTCAGGAAACGACGGGCTCGGACATCGCCTTCGCGGCCATCGTGCATCTCGGCCAGACGGTGCCGGAAAAGAACCTG CGCTGCGTGCTCGAATGCCGGGACATCGTCGCGACCAAGACCGCCGACGGCGATTTTACCGTGCGCAACGGCCGGGTCAC TGCGCCCACAGCACCGGGCCTTGGCATTACACCCCGCCTCGACGTGCTCGGCGATCCAGTGGCCTCCTACTTCTAA
Upstream 100 bases:
>100_bases CGATATCGTCGAGGCGCAGCGGGATTTCCTGTCGAAGCGCATCGCCGGCAAGCTCGTCCTCGTCATCCCCGAATAGACGC CATCCCGGAATAAGAAGCAG
Downstream 100 bases:
>100_bases ACAGGGATGCGGCGCCCTGTCTTATCGACGCCGTAAAGAAGAGGGAACGAAAATGAAAAAACTGCTCGCATCTACATGTC TGCTGGCCGGCCTTGCCGGC
Product: mandelate racemase/muconate lactonizing protein
Products: NA
Alternate protein names: Cis,cis-muconate lactonizing enzyme I; MLE; Muconate cycloisomerase I [H]
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSELKIEKIDVFQVDLPYSGGVYRLSGGREYRSFDATIVRITTQNGLEGWGESTPFGSTYIASHALGVRAGIAEIAQSLI GLDPRRVDRVNDAMDNALLGHLHAKTALDVACWDLFGKSVGLPVCELLGGRTDVQMPVISSIYMGDPDDMRRRVAEHRQL GYLAHSVKIGDEPAIDAARIAASLADKRPGEFFIVDANGGMTVETALRMLRLLPAGLDFVLEAPCATWRECMSLRRRTDV PIIFDELATDDAAIAQLVSDDAAEGIGLKISKNGGLTRGRRHRDISVAAGYTVSVQETTGSDIAFAAIVHLGQTVPEKNL RCVLECRDIVATKTADGDFTVRNGRVTAPTAPGLGITPRLDVLGDPVASYF
Sequences:
>Translated_371_residues MSELKIEKIDVFQVDLPYSGGVYRLSGGREYRSFDATIVRITTQNGLEGWGESTPFGSTYIASHALGVRAGIAEIAQSLI GLDPRRVDRVNDAMDNALLGHLHAKTALDVACWDLFGKSVGLPVCELLGGRTDVQMPVISSIYMGDPDDMRRRVAEHRQL GYLAHSVKIGDEPAIDAARIAASLADKRPGEFFIVDANGGMTVETALRMLRLLPAGLDFVLEAPCATWRECMSLRRRTDV PIIFDELATDDAAIAQLVSDDAAEGIGLKISKNGGLTRGRRHRDISVAAGYTVSVQETTGSDIAFAAIVHLGQTVPEKNL RCVLECRDIVATKTADGDFTVRNGRVTAPTAPGLGITPRLDVLGDPVASYF >Mature_370_residues SELKIEKIDVFQVDLPYSGGVYRLSGGREYRSFDATIVRITTQNGLEGWGESTPFGSTYIASHALGVRAGIAEIAQSLIG LDPRRVDRVNDAMDNALLGHLHAKTALDVACWDLFGKSVGLPVCELLGGRTDVQMPVISSIYMGDPDDMRRRVAEHRQLG YLAHSVKIGDEPAIDAARIAASLADKRPGEFFIVDANGGMTVETALRMLRLLPAGLDFVLEAPCATWRECMSLRRRTDVP IIFDELATDDAAIAQLVSDDAAEGIGLKISKNGGLTRGRRHRDISVAAGYTVSVQETTGSDIAFAAIVHLGQTVPEKNLR CVLECRDIVATKTADGDFTVRNGRVTAPTAPGLGITPRLDVLGDPVASYF
Specific function: Catalyzes a syn cycloisomerization [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013370 - InterPro: IPR018110 - InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =5.5.1.1 [H]
Molecular weight: Translated: 39981; Mature: 39850
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELKIEKIDVFQVDLPYSGGVYRLSGGREYRSFDATIVRITTQNGLEGWGESTPFGSTY CCCCEEEEEEEEEEECCCCCCEEEECCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCHH IASHALGVRAGIAEIAQSLIGLDPRRVDRVNDAMDNALLGHLHAKTALDVACWDLFGKSV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLPVCELLGGRTDVQMPVISSIYMGDPDDMRRRVAEHRQLGYLAHSVKIGDEPAIDAARI CCCHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH AASLADKRPGEFFIVDANGGMTVETALRMLRLLPAGLDFVLEAPCATWRECMSLRRRTDV HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHCCC PIIFDELATDDAAIAQLVSDDAAEGIGLKISKNGGLTRGRRHRDISVAAGYTVSVQETTG CEEEHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEECCCC SDIAFAAIVHLGQTVPEKNLRCVLECRDIVATKTADGDFTVRNGRVTAPTAPGLGITPRL CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHEECCCCCEEEECCEEECCCCCCCCCCCCH DVLGDPVASYF HHCCCCHHHCC >Mature Secondary Structure SELKIEKIDVFQVDLPYSGGVYRLSGGREYRSFDATIVRITTQNGLEGWGESTPFGSTY CCCEEEEEEEEEEECCCCCCEEEECCCCCEEECCEEEEEEEECCCCCCCCCCCCCCCHH IASHALGVRAGIAEIAQSLIGLDPRRVDRVNDAMDNALLGHLHAKTALDVACWDLFGKSV HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLPVCELLGGRTDVQMPVISSIYMGDPDDMRRRVAEHRQLGYLAHSVKIGDEPAIDAARI CCCHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH AASLADKRPGEFFIVDANGGMTVETALRMLRLLPAGLDFVLEAPCATWRECMSLRRRTDV HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHCCC PIIFDELATDDAAIAQLVSDDAAEGIGLKISKNGGLTRGRRHRDISVAAGYTVSVQETTG CEEEHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEECCCC SDIAFAAIVHLGQTVPEKNLRCVLECRDIVATKTADGDFTVRNGRVTAPTAPGLGITPRL CCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHEECCCCCEEEECCEEECCCCCCCCCCCCH DVLGDPVASYF HHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3609743; 2449420; 2215699; 3612800; 7500361 [H]