Click here to switch to the map view.

The map label for this gene is marA [C]

Identifier: 209550484

GI number: 209550484

Start: 2961174

End: 2962043

Strand: Reverse

Name: marA [C]

Synonym: Rleg2_2907

Alternate gene names: 209550484

Gene position: 2962043-2961174 (Counterclockwise)

Preceding gene: 209550486

Following gene: 209550482

Centisome position: 65.27

GC content: 59.77

Gene sequence:

>870_bases
ATGGAACAGCAACACCGTCTGACAGTTAAAGAAGCGCTCTCAAGATCCGGCGCATGCCTTCAGCGCTCCGGCTCGGTCGA
CCGGGGACTGTCGCTTGCGGAGTGGACCAACAGCGCAGGGCAAGCGTTCTACGAGCGCCCCGATCACCACACGCTGAGCA
TCTATCTTGACGGCGGCGAAAGGGTCATCCGCGAGGATAAGCGGCTATCGGGCGGAGCACCGGGCAAGCTTTGCCTCTTG
CCGGCCGAACACAAAAGCCAATGGCATATCGGCGGGCCGTTGAGGATGTTTCATCTTTACGTCGATCCCGAACTCCTCGC
TTATGAAGCGCTGACGTCGTTCGACATTGACCCGAGACATATCGATCTGATGGATCTGACGTTCTGCGATGATCCGGCGA
TGGCGATGATTGTCCGGGGAGGGGTTTTGCCTCTGAACTGGCAGGAAAAGAGCGACCGTGTCGCCCTCGATGCGGTTTGC
AGGCTTCTCATTCATCGCATCTTGAAATCGCACAATCGGCAGACGCGGCACGAGGCCGTGCGCGGAGGGCTTTCACCCTC
GGTGCGTCGCCGTACTGCTGATTACATCGACGCCAATCTCGACCAGGCGCTGACGCTTGATCGGCTGGCACGGGAAGCCG
GCTTGAGCACCTTTCATTTTGCCAAGATGTTTCGCGTCAGCTTCGCCATGCCTCCGCATCGCTACGTGGCGGCGCGGCGG
ATCGAGCAGGCAGAAAGGCTCCTTCGCAACCGCGAAAACAGCCTTGCAGCCGTTGCCTCCGCCTGCGGCTTCGGTTCACA
AAGCCATTTTTCCAAGGCTTTCAAAGCCACCACCGGCGTACCGCCAGGGGAGTGGCGAAGCCTGTCGTGA

Upstream 100 bases:

>100_bases
GACCGTGGAGGCATTGTATATTCTTGGGTTTTTTGCCTCTCATCCTATTGATCGGCTGCGCCGTCCCATTCAAACTCGTG
AGACGAGGCCCCGATGGATC

Downstream 100 bases:

>100_bases
GATCGAGGTCCCGCTAGCGAGAGTTCTTGTCTGACATCCACGGAGAAATGAGAGCCCTCGAATGGCGGGGGATTGTCAGC
AGGCGCTCCTTGGCAAGACC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Transcriptional Regulator AraC; Transcriptional Regulatory Protein; Transcription Regulator AraC Family; Transcriptional Regulator Protein AraC Family; Helix-Turn-Helix Protein; Two Component System Response Regulator; Transcriptional Regulator AraC-Type; HTH-Type Transcriptional Regulator; Regulator; Transcriptional Activator; AraC Family Regulatory Protein; Transcriptional Regulator AraC/XylS Family; HTH-Type Transcriptional Regulator ChbR; Transcription Regulator Protein; Helix-Turn-Helix AraC Type; AraC-Type Trancriptional Regulator; GntR Family Regulatory Protein; AraC Family Helix-Turn-Helix Transcriptional Regulator; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; AraC Family Transcription Regulator Protein; Xyls/AraC-Type Transcriptional Activator

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MEQQHRLTVKEALSRSGACLQRSGSVDRGLSLAEWTNSAGQAFYERPDHHTLSIYLDGGERVIREDKRLSGGAPGKLCLL
PAEHKSQWHIGGPLRMFHLYVDPELLAYEALTSFDIDPRHIDLMDLTFCDDPAMAMIVRGGVLPLNWQEKSDRVALDAVC
RLLIHRILKSHNRQTRHEAVRGGLSPSVRRRTADYIDANLDQALTLDRLAREAGLSTFHFAKMFRVSFAMPPHRYVAARR
IEQAERLLRNRENSLAAVASACGFGSQSHFSKAFKATTGVPPGEWRSLS

Sequences:

>Translated_289_residues
MEQQHRLTVKEALSRSGACLQRSGSVDRGLSLAEWTNSAGQAFYERPDHHTLSIYLDGGERVIREDKRLSGGAPGKLCLL
PAEHKSQWHIGGPLRMFHLYVDPELLAYEALTSFDIDPRHIDLMDLTFCDDPAMAMIVRGGVLPLNWQEKSDRVALDAVC
RLLIHRILKSHNRQTRHEAVRGGLSPSVRRRTADYIDANLDQALTLDRLAREAGLSTFHFAKMFRVSFAMPPHRYVAARR
IEQAERLLRNRENSLAAVASACGFGSQSHFSKAFKATTGVPPGEWRSLS
>Mature_289_residues
MEQQHRLTVKEALSRSGACLQRSGSVDRGLSLAEWTNSAGQAFYERPDHHTLSIYLDGGERVIREDKRLSGGAPGKLCLL
PAEHKSQWHIGGPLRMFHLYVDPELLAYEALTSFDIDPRHIDLMDLTFCDDPAMAMIVRGGVLPLNWQEKSDRVALDAVC
RLLIHRILKSHNRQTRHEAVRGGLSPSVRRRTADYIDANLDQALTLDRLAREAGLSTFHFAKMFRVSFAMPPHRYVAARR
IEQAERLLRNRENSLAAVASACGFGSQSHFSKAFKATTGVPPGEWRSLS

Specific function: May Be A Transcriptional Activator Of Genes Involved In The Multiple Antibiotic Resistance (Mar) Phenotype. It Can Also Activate Genes Such As Soda, Zwf And Micf. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32423; Mature: 32423

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQHRLTVKEALSRSGACLQRSGSVDRGLSLAEWTNSAGQAFYERPDHHTLSIYLDGGE
CCCCHHHHHHHHHCCCCCHHHCCCCHHHCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCH
RVIREDKRLSGGAPGKLCLLPAEHKSQWHIGGPLRMFHLYVDPELLAYEALTSFDIDPRH
HHHHHHHHCCCCCCCCEEEEECCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCCCCCCE
IDLMDLTFCDDPAMAMIVRGGVLPLNWQEKSDRVALDAVCRLLIHRILKSHNRQTRHEAV
EEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RGGLSPSVRRRTADYIDANLDQALTLDRLAREAGLSTFHFAKMFRVSFAMPPHRYVAARR
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH
IEQAERLLRNRENSLAAVASACGFGSQSHFSKAFKATTGVPPGEWRSLS
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEQQHRLTVKEALSRSGACLQRSGSVDRGLSLAEWTNSAGQAFYERPDHHTLSIYLDGGE
CCCCHHHHHHHHHCCCCCHHHCCCCHHHCCCHHHHCCHHHHHHHCCCCCCEEEEEECCCH
RVIREDKRLSGGAPGKLCLLPAEHKSQWHIGGPLRMFHLYVDPELLAYEALTSFDIDPRH
HHHHHHHHCCCCCCCCEEEEECCCCCCEECCCCEEEEEEEECCHHHHHHHHHHCCCCCCE
IDLMDLTFCDDPAMAMIVRGGVLPLNWQEKSDRVALDAVCRLLIHRILKSHNRQTRHEAV
EEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
RGGLSPSVRRRTADYIDANLDQALTLDRLAREAGLSTFHFAKMFRVSFAMPPHRYVAARR
HCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH
IEQAERLLRNRENSLAAVASACGFGSQSHFSKAFKATTGVPPGEWRSLS
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA