| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550466
Identifier: 209550466
GI number: 209550466
Start: 2938067
End: 2938774
Strand: Reverse
Name: 209550466
Synonym: Rleg2_2889
Alternate gene names: NA
Gene position: 2938774-2938067 (Counterclockwise)
Preceding gene: 209550467
Following gene: 209550465
Centisome position: 64.76
GC content: 61.86
Gene sequence:
>708_bases ATGCGCTATGCCATTTGCTTCACGCCTCCGGCGAGCGACCCGCTATCGCTCATGGCCGCCCAATGGCTTGGCCGAAACGT GTTTTCAGGTGAGATGCTGGAACCTCCGGCCGTTCGTGGCCTCGGCATCCATGAGATTGCCTTCCATACGGCGGTGCCGC GGCGCTATGGTTTTCACGGCCTTTTGAAGGCGCCGTTCCACTTGTGTCAGGAGCTGTCCGAATCGCAACTCCTGCGCGAT CTGATGCGTTTTTCCGGGACTGTCCTTCCCTTCCAGATTCCGCGTCTCGAAGTCGCCCGGCTCGGCAATTTCTACAGCCT GCTGCCGAGTGTTCCGTGCGAGCAGATCCAATATCTCGCTTCGGCGATCGTGCAGGAATTCGACCGTTTCCGCGCGCCGC TGAGCGAAGCCGACATCGAGCGCAGCGATCCGGACGGGCTGTCGGCGGCGCAGTTCGCCAACCTGCATCGCTGGGGCAAT CCCTACGTGATGGATGAGTTCCGCTTCCATATGCCGGTGACGGGCCCGGTCAACGCAATCGACATGCCGCGCATCGAGCC GGCGCTGCGGACGATTTTCGAGCCCGTGCTCTGCGAACCGGTCGTGGTTTCGAACGTGGCGCTGATGATCGAGGAGGGCA CCGGCGGTCCTTTCCGCGTTCATTCTCTGCACCCAATGGGCAAGGTCAGCGCGCGCAAAATCGCCTGA
Upstream 100 bases:
>100_bases CCACTTCGTTTCGTTATTCTGTCATGCAAATCACCTATCTGCTTGCGCATCGACAGCGCCTGAAATCACCGGCGCTCCTT TTCCTGATGGAGGAAATCGC
Downstream 100 bases:
>100_bases CATCAGATAAGCTAACGTATTGCGTGGAAAGGATAAAAATCCGCTGCGCAGTTTCCGTCTCGACATTCCGGCTGCGGATG CTACCGTTCTTCGTCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase; Conserved Hypothethical Protein DUF
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRYAICFTPPASDPLSLMAAQWLGRNVFSGEMLEPPAVRGLGIHEIAFHTAVPRRYGFHGLLKAPFHLCQELSESQLLRD LMRFSGTVLPFQIPRLEVARLGNFYSLLPSVPCEQIQYLASAIVQEFDRFRAPLSEADIERSDPDGLSAAQFANLHRWGN PYVMDEFRFHMPVTGPVNAIDMPRIEPALRTIFEPVLCEPVVVSNVALMIEEGTGGPFRVHSLHPMGKVSARKIA
Sequences:
>Translated_235_residues MRYAICFTPPASDPLSLMAAQWLGRNVFSGEMLEPPAVRGLGIHEIAFHTAVPRRYGFHGLLKAPFHLCQELSESQLLRD LMRFSGTVLPFQIPRLEVARLGNFYSLLPSVPCEQIQYLASAIVQEFDRFRAPLSEADIERSDPDGLSAAQFANLHRWGN PYVMDEFRFHMPVTGPVNAIDMPRIEPALRTIFEPVLCEPVVVSNVALMIEEGTGGPFRVHSLHPMGKVSARKIA >Mature_235_residues MRYAICFTPPASDPLSLMAAQWLGRNVFSGEMLEPPAVRGLGIHEIAFHTAVPRRYGFHGLLKAPFHLCQELSESQLLRD LMRFSGTVLPFQIPRLEVARLGNFYSLLPSVPCEQIQYLASAIVQEFDRFRAPLSEADIERSDPDGLSAAQFANLHRWGN PYVMDEFRFHMPVTGPVNAIDMPRIEPALRTIFEPVLCEPVVVSNVALMIEEGTGGPFRVHSLHPMGKVSARKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26267; Mature: 26267
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYAICFTPPASDPLSLMAAQWLGRNVFSGEMLEPPAVRGLGIHEIAFHTAVPRRYGFHG CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCHHH LLKAPFHLCQELSESQLLRDLMRFSGTVLPFQIPRLEVARLGNFYSLLPSVPCEQIQYLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCHHHHHHCCCCHHHHHHHH SAIVQEFDRFRAPLSEADIERSDPDGLSAAQFANLHRWGNPYVMDEFRFHMPVTGPVNAI HHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCC DMPRIEPALRTIFEPVLCEPVVVSNVALMIEEGTGGPFRVHSLHPMGKVSARKIA CCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCEEEECCCCCCCCHHHCCC >Mature Secondary Structure MRYAICFTPPASDPLSLMAAQWLGRNVFSGEMLEPPAVRGLGIHEIAFHTAVPRRYGFHG CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCHHH LLKAPFHLCQELSESQLLRDLMRFSGTVLPFQIPRLEVARLGNFYSLLPSVPCEQIQYLA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCHHHHHHCCCCHHHHHHHH SAIVQEFDRFRAPLSEADIERSDPDGLSAAQFANLHRWGNPYVMDEFRFHMPVTGPVNAI HHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCEEEECCCCCCCCCC DMPRIEPALRTIFEPVLCEPVVVSNVALMIEEGTGGPFRVHSLHPMGKVSARKIA CCCCCCHHHHHHHHHHHCCHHHHCCEEEEEECCCCCCEEEECCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA