| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yjiJ [H]
Identifier: 209550430
GI number: 209550430
Start: 2901813
End: 2902997
Strand: Reverse
Name: yjiJ [H]
Synonym: Rleg2_2851
Alternate gene names: 209550430
Gene position: 2902997-2901813 (Counterclockwise)
Preceding gene: 209550432
Following gene: 209550429
Centisome position: 63.97
GC content: 66.5
Gene sequence:
>1185_bases ATGCTTGAGCGCATCCGTCATTCTCCGCCGAATCTCGTATCCACTGCCGCCGCCGGCGCCGTTGCGATGGCGGCGGCCAT GGGGTTCGGGCGTTTCTCCTACACGCCGATCCTGCCCGGCATGATGAGCGGGGTGCCGCTTTCTGCGGCGGATGCAGGTT TTATCGCTTCGGCGAATTTCGTCGGTTATCTCGTCGGCGCCGTGCTTGCCGCCTATGGCTGGGCGGCGGGGCGCGAACGG CTGGTGGCGCTGCTGGCACTGCTTGCCACCGCAATCCTGCTCGCCGCCATGGCCGCCACAAATTCCGTCGCAGTCTTTGC CGTCATCCGCTTCCTGGCCGGCCTCGCCAGCGCTTTTGCGATGGTTTTCACCTCATCGATCGTGCTCAGCCACGGGGCTG CCGCCGGCAACGACCATGTGCAGGCAGCGCATTTCGGCGGGCCGGGGGCGGGGATCGCGCTGTCCTCGATCATGGTGTTT CTCATCGGCCTCGGCTTTCACGGCGGCCAGGACAGCTGGCGCGCCGACTGGATCGGCGGCGCGCTCTACTGCGCGGCAAG CCTCGTCGTGGTCTTCCTGCTCTTGCCGTCGGCGCCGGCGCAATCGGCGCGTACGGGCAAGGAGCCGGCCCTCGTCTGGA GCCGGCCGATGGTGCTGATCACGCTGTCCTACGGCCTGTTCGGCTTCGGCTATGTGATCACCGCGACCTTTCTCGTCACC ATCGCCCGCCTGTCCTCCACGGGTGCCTTCGTCGAATTTCTCTGCTGGTTCATTGCGGGCCTGACGTCGGCGGTGGCGCT ATTTGCCTGGAAGCCGCTGGTCAGGCCGCTCGGGCTCGGCGGCGTCTATGTCGCAGCACTTCTGGTCGAAGCCGCCGGCG TGCTTGCAACGGTGATGCTGCCGCACTCTGCCGCACCGCTGATCGGCGGGGCGCTGTTCGGGGCGACCTTCCTGGCGATC ACCGCTTACGGCCTGCAGATCGGCCGCAAACTTTCCCCGGAGAGCCCGCGGCGGATCCTGGCGATGATGACCGCAGCCTT CGGTGTCGGCCAGATCGTCGGGCCTGTCGTTGCCGGCTGGATCGCCGAACGCTCGGGCAGTTTCACCGTTCCGACGGTGA TTGCCGCCGCCGCACTTCTTGTCTGCGCGGCGCTTGTGATGCCGGTGATCAAGAAAATCGCTTAA
Upstream 100 bases:
>100_bases CTTTCAAGGGAGGCGAGGAATTTTTCATGTTTCCGGAAATTGATCGACCGATCAGAATTACTTGATTGTCGCGCAGGTGC TGCGGCGCGATAAGCGCTGC
Downstream 100 bases:
>100_bases CCCGTTACATCTGCGTAACAATCGGCTGAACCCATTGCTGCTTCCTTCGAACTGCCTTAGTTTCCGGCAAAATCAGTGTT CCACGACACTCCCGAGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLERIRHSPPNLVSTAAAGAVAMAAAMGFGRFSYTPILPGMMSGVPLSAADAGFIASANFVGYLVGAVLAAYGWAAGRER LVALLALLATAILLAAMAATNSVAVFAVIRFLAGLASAFAMVFTSSIVLSHGAAAGNDHVQAAHFGGPGAGIALSSIMVF LIGLGFHGGQDSWRADWIGGALYCAASLVVVFLLLPSAPAQSARTGKEPALVWSRPMVLITLSYGLFGFGYVITATFLVT IARLSSTGAFVEFLCWFIAGLTSAVALFAWKPLVRPLGLGGVYVAALLVEAAGVLATVMLPHSAAPLIGGALFGATFLAI TAYGLQIGRKLSPESPRRILAMMTAAFGVGQIVGPVVAGWIAERSGSFTVPTVIAAAALLVCAALVMPVIKKIA
Sequences:
>Translated_394_residues MLERIRHSPPNLVSTAAAGAVAMAAAMGFGRFSYTPILPGMMSGVPLSAADAGFIASANFVGYLVGAVLAAYGWAAGRER LVALLALLATAILLAAMAATNSVAVFAVIRFLAGLASAFAMVFTSSIVLSHGAAAGNDHVQAAHFGGPGAGIALSSIMVF LIGLGFHGGQDSWRADWIGGALYCAASLVVVFLLLPSAPAQSARTGKEPALVWSRPMVLITLSYGLFGFGYVITATFLVT IARLSSTGAFVEFLCWFIAGLTSAVALFAWKPLVRPLGLGGVYVAALLVEAAGVLATVMLPHSAAPLIGGALFGATFLAI TAYGLQIGRKLSPESPRRILAMMTAAFGVGQIVGPVVAGWIAERSGSFTVPTVIAAAALLVCAALVMPVIKKIA >Mature_394_residues MLERIRHSPPNLVSTAAAGAVAMAAAMGFGRFSYTPILPGMMSGVPLSAADAGFIASANFVGYLVGAVLAAYGWAAGRER LVALLALLATAILLAAMAATNSVAVFAVIRFLAGLASAFAMVFTSSIVLSHGAAAGNDHVQAAHFGGPGAGIALSSIMVF LIGLGFHGGQDSWRADWIGGALYCAASLVVVFLLLPSAPAQSARTGKEPALVWSRPMVLITLSYGLFGFGYVITATFLVT IARLSSTGAFVEFLCWFIAGLTSAVALFAWKPLVRPLGLGGVYVAALLVEAAGVLATVMLPHSAAPLIGGALFGATFLAI TAYGLQIGRKLSPESPRRILAMMTAAFGVGQIVGPVVAGWIAERSGSFTVPTVIAAAALLVCAALVMPVIKKIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=357, Percent_Identity=33.6134453781513, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010645 - InterPro: IPR016196 [H]
Pfam domain/function: PF06779 DUF1228 [H]
EC number: NA
Molecular weight: Translated: 40152; Mature: 40152
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERIRHSPPNLVSTAAAGAVAMAAAMGFGRFSYTPILPGMMSGVPLSAADAGFIASANF CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHH VGYLVGAVLAAYGWAAGRERLVALLALLATAILLAAMAATNSVAVFAVIRFLAGLASAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MVFTSSIVLSHGAAAGNDHVQAAHFGGPGAGIALSSIMVFLIGLGFHGGQDSWRADWIGG HHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ALYCAASLVVVFLLLPSAPAQSARTGKEPALVWSRPMVLITLSYGLFGFGYVITATFLVT HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHH IARLSSTGAFVEFLCWFIAGLTSAVALFAWKPLVRPLGLGGVYVAALLVEAAGVLATVML HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PHSAAPLIGGALFGATFLAITAYGLQIGRKLSPESPRRILAMMTAAFGVGQIVGPVVAGW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAERSGSFTVPTVIAAAALLVCAALVMPVIKKIA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLERIRHSPPNLVSTAAAGAVAMAAAMGFGRFSYTPILPGMMSGVPLSAADAGFIASANF CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHH VGYLVGAVLAAYGWAAGRERLVALLALLATAILLAAMAATNSVAVFAVIRFLAGLASAFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH MVFTSSIVLSHGAAAGNDHVQAAHFGGPGAGIALSSIMVFLIGLGFHGGQDSWRADWIGG HHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ALYCAASLVVVFLLLPSAPAQSARTGKEPALVWSRPMVLITLSYGLFGFGYVITATFLVT HHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEECCCEEEEEEHHHHHHHHHHHHHHHHHH IARLSSTGAFVEFLCWFIAGLTSAVALFAWKPLVRPLGLGGVYVAALLVEAAGVLATVML HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC PHSAAPLIGGALFGATFLAITAYGLQIGRKLSPESPRRILAMMTAAFGVGQIVGPVVAGW CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IAERSGSFTVPTVIAAAALLVCAALVMPVIKKIA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]